RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 KLRG1Q96E93 195 aa18.3■□□□□ 0.52
LITAF-208ENST00000571627 PUS3Q9BZE2 481 aaKnown RBP18.3■□□□□ 0.52
LITAF-208ENST00000571627 TRAF5O00463 557 aa18.29■□□□□ 0.52
LITAF-208ENST00000571627 TBC1D10BQ4KMP7 808 aaPredicted RBP18.29■□□□□ 0.52
LITAF-208ENST00000571627 RSBN1LQ6PCB5 846 aaPredicted RBP18.29■□□□□ 0.52
LITAF-208ENST00000571627 PODNQ7Z5L7 613 aa18.29■□□□□ 0.52
LITAF-208ENST00000571627 FBXW7Q969H0 707 aa18.29■□□□□ 0.52
LITAF-208ENST00000571627 CREBZFQ9NS37 354 aa18.29■□□□□ 0.52
LITAF-208ENST00000571627 TNNQ9UQP3 1299 aa18.29■□□□□ 0.52
LITAF-208ENST00000571627 IRS2Q9Y4H2 1338 aa18.28■□□□□ 0.52
LITAF-208ENST00000571627 USP17L3A6NCW0 530 aa18.28■□□□□ 0.52
LITAF-208ENST00000571627 USP17L4A6NCW7 530 aa18.28■□□□□ 0.52
LITAF-208ENST00000571627 RBM26Q5T8P6 1007 aaKnown RBP18.28■□□□□ 0.52
LITAF-208ENST00000571627 USP17L1Q7RTZ2 530 aa18.28■□□□□ 0.52
LITAF-208ENST00000571627 FRAT1Q92837 279 aaPredicted RBP18.28■□□□□ 0.52
LITAF-208ENST00000571627 MXD3Q9BW11 206 aa18.28■□□□□ 0.52
LITAF-208ENST00000571627 COA1Q9GZY4 146 aa18.28■□□□□ 0.52
LITAF-208ENST00000571627 PCNTO95613 3336 aa18.27■□□□□ 0.52
LITAF-208ENST00000571627 ZNF609O15014 1411 aa18.27■□□□□ 0.52
LITAF-208ENST00000571627 KLHDC4Q8TBB5 520 aa18.27■□□□□ 0.52
LITAF-208ENST00000571627 TMEM88BA6NKF7 163 aa18.26■□□□□ 0.51
LITAF-208ENST00000571627 UBTFL1P0CB47 393 aaPredicted RBP18.26■□□□□ 0.51
LITAF-208ENST00000571627 ARHGAP45Q92619 1136 aa18.26■□□□□ 0.51
LITAF-208ENST00000571627 GMLQ99445 158 aa18.26■□□□□ 0.51
LITAF-208ENST00000571627 GLIS2Q9BZE0 524 aaPredicted RBP18.26■□□□□ 0.51
LITAF-208ENST00000571627 MKRN1Q9UHC7 482 aaKnown RBP18.26■□□□□ 0.51
LITAF-208ENST00000571627 TRIM27P14373 513 aa18.25■□□□□ 0.51
LITAF-208ENST00000571627 KIF4BQ2VIQ3 1234 aa18.25■□□□□ 0.51
LITAF-208ENST00000571627 LRRC24Q50LG9 513 aa18.25■□□□□ 0.51
LITAF-208ENST00000571627 DACT2Q5SW24 774 aa18.25■□□□□ 0.51
LITAF-208ENST00000571627 AGBL3Q8NEM8 1001 aa18.25■□□□□ 0.51
LITAF-208ENST00000571627 MEIS3Q99687 375 aa18.25■□□□□ 0.51
LITAF-208ENST00000571627 PGAP2Q9UHJ9 254 aa18.25■□□□□ 0.51
LITAF-208ENST00000571627 RIPOR2Q9Y4F9 1068 aa18.25■□□□□ 0.51
LITAF-208ENST00000571627 C15orf52Q6ZUT6 534 aaKnown RBP18.24■□□□□ 0.51
LITAF-208ENST00000571627 ZC3H15Q8WU90 426 aaKnown RBP18.24■□□□□ 0.51
LITAF-208ENST00000571627 CLUAP1Q96AJ1 413 aa18.24■□□□□ 0.51
LITAF-208ENST00000571627 CD209Q9NNX6 404 aa18.24■□□□□ 0.51
LITAF-208ENST00000571627 LRRFIP2Q9Y608 721 aaKnown RBP18.24■□□□□ 0.51
LITAF-208ENST00000571627 ASTN2O75129 1339 aaPredicted RBP18.23■□□□□ 0.51
LITAF-208ENST00000571627 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
LITAF-208ENST00000571627 USP17L8P0C7I0 530 aa18.23■□□□□ 0.51
LITAF-208ENST00000571627 ZNF280AP59817 542 aaPredicted RBP18.23■□□□□ 0.51
LITAF-208ENST00000571627 GTF2IP78347 998 aa18.23■□□□□ 0.51
LITAF-208ENST00000571627 STRIP1Q5VSL9 837 aa18.23■□□□□ 0.51
LITAF-208ENST00000571627 INTS3Q68E01 1043 aaKnown RBP18.23■□□□□ 0.51
LITAF-208ENST00000571627 DLK2Q6UY11 383 aa18.23■□□□□ 0.51
LITAF-208ENST00000571627 ATF7IPQ6VMQ6 1270 aa18.23■□□□□ 0.51
LITAF-208ENST00000571627 CNTNAP1P78357 1384 aa18.22■□□□□ 0.51
LITAF-208ENST00000571627 RFX5P48382 616 aaPredicted RBP18.22■□□□□ 0.51
LITAF-208ENST00000571627 METTL24Q5JXM2 366 aa18.22■□□□□ 0.51
LITAF-208ENST00000571627 TTLL5Q6EMB2 1281 aa18.22■□□□□ 0.51
LITAF-208ENST00000571627 ZNF804AQ7Z570 1209 aa18.22■□□□□ 0.51
LITAF-208ENST00000571627 JMYQ8N9B5 988 aa18.22■□□□□ 0.51
LITAF-208ENST00000571627 MROH5Q6ZUA9 1318 aa18.22■□□□□ 0.51
LITAF-208ENST00000571627 UBE4AQ14139 1066 aa18.21■□□□□ 0.51
LITAF-208ENST00000571627 CST9Q5W186 159 aa18.21■□□□□ 0.51
LITAF-208ENST00000571627 USP48Q86UV5 1035 aa18.21■□□□□ 0.51
LITAF-208ENST00000571627 MYOZ2Q9NPC6 264 aa18.21■□□□□ 0.51
LITAF-208ENST00000571627 GGA3Q9NZ52 723 aa18.21■□□□□ 0.51
LITAF-208ENST00000571627 ABT1Q9ULW3 272 aaKnown RBP18.21■□□□□ 0.51
LITAF-208ENST00000571627 JAG2Q9Y219 1238 aa18.21■□□□□ 0.51
LITAF-208ENST00000571627 ADM5C9JUS6 153 aa18.2■□□□□ 0.5
LITAF-208ENST00000571627 GYG1P46976 350 aa18.2■□□□□ 0.5
LITAF-208ENST00000571627 PTPN12Q05209 780 aaKnown RBP18.2■□□□□ 0.5
LITAF-208ENST00000571627 ZKSCAN2Q63HK3 967 aa18.2■□□□□ 0.5
LITAF-208ENST00000571627 CDC37L1Q7L3B6 337 aa18.2■□□□□ 0.5
LITAF-208ENST00000571627 VGLL2Q8N8G2 317 aa18.2■□□□□ 0.5
LITAF-208ENST00000571627 ZNF408Q9H9D4 720 aa18.2■□□□□ 0.5
LITAF-208ENST00000571627 MYO3BQ8WXR4 1341 aa18.2■□□□□ 0.5
LITAF-208ENST00000571627 CELF2O95319 508 aaKnown RBP18.19■□□□□ 0.5
LITAF-208ENST00000571627 IL1R1P14778 569 aa18.19■□□□□ 0.5
LITAF-208ENST00000571627 SCARF1Q14162 830 aa18.19■□□□□ 0.5
LITAF-208ENST00000571627 KRT26Q7Z3Y9 468 aa18.19■□□□□ 0.5
LITAF-208ENST00000571627 KIAA0825Q8IV33 1275 aa18.19■□□□□ 0.5
LITAF-208ENST00000571627 CERS5Q8N5B7 392 aa18.19■□□□□ 0.5
LITAF-208ENST00000571627 ARAP2Q8WZ64 1704 aa18.19■□□□□ 0.5
LITAF-208ENST00000571627 DCPSQ96C86 337 aaKnown RBP18.19■□□□□ 0.5
LITAF-208ENST00000571627 SIL1Q9H173 461 aa18.19■□□□□ 0.5
LITAF-208ENST00000571627 MYH13Q9UKX3 1938 aa18.18■□□□□ 0.5
LITAF-208ENST00000571627 ANGEL2Q5VTE6 544 aaKnown RBP18.18■□□□□ 0.5
LITAF-208ENST00000571627 TMEM57Q8N5G2 664 aa18.18■□□□□ 0.5
LITAF-208ENST00000571627 FAM84BQ96KN1 310 aaPredicted RBP18.18■□□□□ 0.5
LITAF-208ENST00000571627 RASSF10A6NK89 507 aa18.17■□□□□ 0.5
LITAF-208ENST00000571627 EYA2O00167 538 aa18.17■□□□□ 0.5
LITAF-208ENST00000571627 PDE8BO95263 885 aa18.17■□□□□ 0.5
LITAF-208ENST00000571627 GNAI3P08754 354 aa18.17■□□□□ 0.5
LITAF-208ENST00000571627 VEGFBP49765 207 aa18.17■□□□□ 0.5
LITAF-208ENST00000571627 ATG9AQ7Z3C6 839 aa18.17■□□□□ 0.5
LITAF-208ENST00000571627 OGFOD1Q8N543 542 aa18.17■□□□□ 0.5
LITAF-208ENST00000571627 SCAF8Q9UPN6 1271 aaKnown RBP18.17■□□□□ 0.5
LITAF-208ENST00000571627 PA2G4Q9UQ80 394 aaKnown RBP18.17■□□□□ 0.5
LITAF-208ENST00000571627 SASH1O94885 1247 aa18.16■□□□□ 0.5
LITAF-208ENST00000571627 HIBADHP31937 336 aaKnown RBP18.16■□□□□ 0.5
LITAF-208ENST00000571627 DEFB115Q30KQ5 88 aa18.16■□□□□ 0.5
LITAF-208ENST00000571627 NBPF9Q3BBW0 867 aa18.16■□□□□ 0.5
LITAF-208ENST00000571627 IQSEC3Q9UPP2 1182 aaPredicted RBP18.16■□□□□ 0.5
LITAF-208ENST00000571627 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
LITAF-208ENST00000571627 ECM29Q5VYK3 1845 aa18.16■□□□□ 0.5
LITAF-208ENST00000571627 F8W031 263 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms