RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 KCNJ4P48050 445 aa12.35□□□□□ -0.43
CIITA-207ENST00000571545 HIRAP54198 1017 aaPredicted RBP12.35□□□□□ -0.43
CIITA-207ENST00000571545 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
CIITA-207ENST00000571545 FAM161AQ3B820 660 aa12.35□□□□□ -0.43
CIITA-207ENST00000571545 CST9Q5W186 159 aa12.35□□□□□ -0.43
CIITA-207ENST00000571545 SAPCD2Q86UD0 394 aa12.35□□□□□ -0.43
CIITA-207ENST00000571545 SULF1Q8IWU6 871 aa12.35□□□□□ -0.43
CIITA-207ENST00000571545 OGFOD1Q8N543 542 aa12.35□□□□□ -0.43
CIITA-207ENST00000571545 GLIS2Q9BZE0 524 aaPredicted RBP12.35□□□□□ -0.43
CIITA-207ENST00000571545 ZNF521Q96K83 1311 aa12.35□□□□□ -0.43
CIITA-207ENST00000571545 FOXN1O15353 648 aa12.34□□□□□ -0.43
CIITA-207ENST00000571545 CA12O43570 354 aa12.34□□□□□ -0.43
CIITA-207ENST00000571545 USP17L8P0C7I0 530 aa12.34□□□□□ -0.43
CIITA-207ENST00000571545 CASP7P55210 303 aa12.34□□□□□ -0.43
CIITA-207ENST00000571545 ZNF280AP59817 542 aaPredicted RBP12.34□□□□□ -0.43
CIITA-207ENST00000571545 TBC1D10BQ4KMP7 808 aaPredicted RBP12.34□□□□□ -0.43
CIITA-207ENST00000571545 BEND3Q5T5X7 828 aa12.34□□□□□ -0.43
CIITA-207ENST00000571545 SAMD7Q7Z3H4 446 aa12.34□□□□□ -0.43
CIITA-207ENST00000571545 GPR101Q96P66 508 aaPredicted RBP12.34□□□□□ -0.43
CIITA-207ENST00000571545 ZNF408Q9H9D4 720 aa12.34□□□□□ -0.43
CIITA-207ENST00000571545 C9orf78Q9NZ63 289 aaPredicted RBP12.34□□□□□ -0.43
CIITA-207ENST00000571545 ZNF804BA4D1E1 1349 aa12.34□□□□□ -0.43
CIITA-207ENST00000571545 PITPNM2Q9BZ72 1349 aa12.34□□□□□ -0.43
CIITA-207ENST00000571545 GRM8O00222 908 aa12.33□□□□□ -0.44
CIITA-207ENST00000571545 CCDC57Q2TAC2 916 aa12.33□□□□□ -0.44
CIITA-207ENST00000571545 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.44
CIITA-207ENST00000571545 STRIP1Q5VSL9 837 aa12.33□□□□□ -0.44
CIITA-207ENST00000571545 C2orf69Q8N8R5 385 aa12.33□□□□□ -0.44
CIITA-207ENST00000571545 SRCIN1Q9C0H9 1055 aa12.33□□□□□ -0.44
CIITA-207ENST00000571545 GGA3Q9NZ52 723 aa12.33□□□□□ -0.44
CIITA-207ENST00000571545 CHMP3Q9Y3E7 222 aa12.33□□□□□ -0.44
CIITA-207ENST00000571545 PTPRCP08575 1304 aa12.33□□□□□ -0.44
CIITA-207ENST00000571545 A0A1B0GUL6 1792 aa12.33□□□□□ -0.44
CIITA-207ENST00000571545 POLR2AP24928 1970 aaKnown RBP12.32□□□□□ -0.44
CIITA-207ENST00000571545 NOGQ13253 232 aa12.32□□□□□ -0.44
CIITA-207ENST00000571545 RBM26Q5T8P6 1007 aaKnown RBP12.32□□□□□ -0.44
CIITA-207ENST00000571545 CYP4F22Q6NT55 531 aa12.32□□□□□ -0.44
CIITA-207ENST00000571545 MYOZ2Q9NPC6 264 aa12.32□□□□□ -0.44
CIITA-207ENST00000571545 KCNQ5Q9NR82 932 aa12.32□□□□□ -0.44
CIITA-207ENST00000571545 HDAC9Q9UKV0 1011 aa12.32□□□□□ -0.44
CIITA-207ENST00000571545 PCNTO95613 3336 aa12.32□□□□□ -0.44
CIITA-207ENST00000571545 SHTN1A0MZ66 631 aa12.31□□□□□ -0.44
CIITA-207ENST00000571545 F6X3S4 739 aa12.31□□□□□ -0.44
CIITA-207ENST00000571545 BRPF1P55201 1214 aaPredicted RBP12.31□□□□□ -0.44
CIITA-207ENST00000571545 FKBP1BP68106 108 aa12.31□□□□□ -0.44
CIITA-207ENST00000571545 CHRNDQ07001 517 aa12.31□□□□□ -0.44
CIITA-207ENST00000571545 GRM1Q13255 1194 aa12.31□□□□□ -0.44
CIITA-207ENST00000571545 SLC4A10Q6U841 1118 aa12.31□□□□□ -0.44
CIITA-207ENST00000571545 ZNF804AQ7Z570 1209 aa12.31□□□□□ -0.44
CIITA-207ENST00000571545 USP48Q86UV5 1035 aa12.31□□□□□ -0.44
CIITA-207ENST00000571545 GMLQ99445 158 aa12.31□□□□□ -0.44
CIITA-207ENST00000571545 GBA2Q9HCG7 927 aaPredicted RBP12.31□□□□□ -0.44
CIITA-207ENST00000571545 PAPPA2Q9BXP8 1791 aa12.3□□□□□ -0.44
CIITA-207ENST00000571545 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
CIITA-207ENST00000571545 HUNKP57058 714 aa12.3□□□□□ -0.44
CIITA-207ENST00000571545 FMR1Q06787 632 aaKnown RBP eCLIP12.3□□□□□ -0.44
CIITA-207ENST00000571545 DACT2Q5SW24 774 aa12.3□□□□□ -0.44
CIITA-207ENST00000571545 C15orf52Q6ZUT6 534 aaKnown RBP12.3□□□□□ -0.44
CIITA-207ENST00000571545 FBXW7Q969H0 707 aa12.3□□□□□ -0.44
CIITA-207ENST00000571545 CCDC102AQ96A19 550 aa12.3□□□□□ -0.44
CIITA-207ENST00000571545 EGFRP00533 1210 aa12.29□□□□□ -0.44
CIITA-207ENST00000571545 CT47B1P0C2W7 299 aaPredicted RBP12.29□□□□□ -0.44
CIITA-207ENST00000571545 NF2P35240 595 aa12.29□□□□□ -0.44
CIITA-207ENST00000571545 FOXO4P98177 505 aa12.29□□□□□ -0.44
CIITA-207ENST00000571545 SCARF1Q14162 830 aa12.29□□□□□ -0.44
CIITA-207ENST00000571545 ANGEL2Q5VTE6 544 aaKnown RBP12.29□□□□□ -0.44
CIITA-207ENST00000571545 TTLL5Q6EMB2 1281 aa12.29□□□□□ -0.44
CIITA-207ENST00000571545 LMBR1LQ6UX01 489 aa12.29□□□□□ -0.44
CIITA-207ENST00000571545 COL1A1P02452 1464 aaPredicted RBP12.28□□□□□ -0.44
CIITA-207ENST00000571545 ADM5C9JUS6 153 aa12.28□□□□□ -0.44
CIITA-207ENST00000571545 CCER2I3L3R5 266 aa12.28□□□□□ -0.44
CIITA-207ENST00000571545 HSPA8P11142 646 aaKnown RBP12.28□□□□□ -0.44
CIITA-207ENST00000571545 LBX1P52954 281 aa12.28□□□□□ -0.44
CIITA-207ENST00000571545 ALDH1L2Q3SY69 923 aa12.28□□□□□ -0.44
CIITA-207ENST00000571545 RGMBQ6NW40 437 aa12.28□□□□□ -0.44
CIITA-207ENST00000571545 LDHAL6AQ6ZMR3 332 aa12.28□□□□□ -0.44
CIITA-207ENST00000571545 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
CIITA-207ENST00000571545 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
CIITA-207ENST00000571545 UTYO14607 1347 aa12.28□□□□□ -0.44
CIITA-207ENST00000571545 ECM29Q5VYK3 1845 aa12.27□□□□□ -0.44
CIITA-207ENST00000571545 FKBP1AP62942 108 aaKnown RBP12.27□□□□□ -0.45
CIITA-207ENST00000571545 APOBEC3FQ8IUX4 373 aaKnown RBP12.27□□□□□ -0.45
CIITA-207ENST00000571545 CDCA5Q96FF9 252 aa12.27□□□□□ -0.45
CIITA-207ENST00000571545 CD209Q9NNX6 404 aa12.27□□□□□ -0.45
CIITA-207ENST00000571545 HDAC5Q9UQL6 1122 aa12.27□□□□□ -0.45
CIITA-207ENST00000571545 MYO1BO43795 1136 aa12.26□□□□□ -0.45
CIITA-207ENST00000571545 GTF2IP78347 998 aa12.26□□□□□ -0.45
CIITA-207ENST00000571545 SLFN5Q08AF3 891 aa12.26□□□□□ -0.45
CIITA-207ENST00000571545 UBE4AQ14139 1066 aa12.26□□□□□ -0.45
CIITA-207ENST00000571545 TXNRD3Q86VQ6 643 aa12.26□□□□□ -0.45
CIITA-207ENST00000571545 MROH5Q6ZUA9 1318 aa12.26□□□□□ -0.45
CIITA-207ENST00000571545 ARAP2Q8WZ64 1704 aa12.25□□□□□ -0.45
CIITA-207ENST00000571545 AKAP11Q9UKA4 1901 aa12.25□□□□□ -0.45
CIITA-207ENST00000571545 WNT10BO00744 389 aa12.25□□□□□ -0.45
CIITA-207ENST00000571545 AOC2O75106 756 aa12.25□□□□□ -0.45
CIITA-207ENST00000571545 IL1R1P14778 569 aa12.25□□□□□ -0.45
CIITA-207ENST00000571545 ZNF157P51786 506 aaPredicted RBP12.25□□□□□ -0.45
CIITA-207ENST00000571545 POLA2Q14181 598 aa12.25□□□□□ -0.45
CIITA-207ENST00000571545 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
CIITA-207ENST00000571545 SAGE1Q9NXZ1 904 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms