RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 ANGEL1Q9UNK9 670 aaKnown RBP9.46□□□□□ -0.9
CHD3-213ENST00000571249 ZSWIM8A7E2V4 1837 aa9.46□□□□□ -0.9
CHD3-213ENST00000571249 ECE2O60344 883 aa9.45□□□□□ -0.9
CHD3-213ENST00000571249 VIL1P09327 827 aaKnown RBP9.45□□□□□ -0.9
CHD3-213ENST00000571249 GPTP24298 496 aa9.45□□□□□ -0.9
CHD3-213ENST00000571249 SUSD4Q5VX71 490 aa9.45□□□□□ -0.9
CHD3-213ENST00000571249 ARMC9Q7Z3E5 817 aa9.45□□□□□ -0.9
CHD3-213ENST00000571249 MYLIPQ8WY64 445 aa9.45□□□□□ -0.9
CHD3-213ENST00000571249 NYXQ9GZU5 481 aa9.45□□□□□ -0.9
CHD3-213ENST00000571249 ARHGEF6Q15052 776 aa9.44□□□□□ -0.9
CHD3-213ENST00000571249 USP38Q8NB14 1042 aa9.44□□□□□ -0.9
CHD3-213ENST00000571249 MYOZ2Q9NPC6 264 aa9.44□□□□□ -0.9
CHD3-213ENST00000571249 ARIH1Q9Y4X5 557 aaPredicted RBP9.44□□□□□ -0.9
CHD3-213ENST00000571249 ALPK3Q96L96 1907 aa9.44□□□□□ -0.9
CHD3-213ENST00000571249 TAF1P21675 1872 aa9.43□□□□□ -0.9
CHD3-213ENST00000571249 DUOX1Q9NRD9 1551 aa9.43□□□□□ -0.9
CHD3-213ENST00000571249 UBN2Q6ZU65 1347 aa9.43□□□□□ -0.9
CHD3-213ENST00000571249 BBOX1O75936 387 aa9.43□□□□□ -0.9
CHD3-213ENST00000571249 ZBTB48P10074 688 aaPredicted RBP9.43□□□□□ -0.9
CHD3-213ENST00000571249 CTGFP29279 349 aa9.43□□□□□ -0.9
CHD3-213ENST00000571249 NF2P35240 595 aa9.43□□□□□ -0.9
CHD3-213ENST00000571249 OTUD7BQ6GQQ9 843 aa9.43□□□□□ -0.9
CHD3-213ENST00000571249 DIS3LQ8TF46 1054 aaKnown RBP9.43□□□□□ -0.9
CHD3-213ENST00000571249 PAWRQ96IZ0 340 aaKnown RBP9.43□□□□□ -0.9
CHD3-213ENST00000571249 FMNL2Q96PY5 1086 aa9.43□□□□□ -0.9
CHD3-213ENST00000571249 SEMA6BQ9H3T3 888 aa9.43□□□□□ -0.9
CHD3-213ENST00000571249 SGPL1O95470 568 aa9.42□□□□□ -0.9
CHD3-213ENST00000571249 MTHFSDQ2M296 383 aaKnown RBP9.42□□□□□ -0.9
CHD3-213ENST00000571249 ZNF697Q5TEC3 545 aa9.42□□□□□ -0.9
CHD3-213ENST00000571249 LRFN3Q9BTN0 628 aa9.42□□□□□ -0.9
CHD3-213ENST00000571249 PCGF6Q9BYE7 350 aa9.42□□□□□ -0.9
CHD3-213ENST00000571249 UNC93B1Q9H1C4 597 aa9.42□□□□□ -0.9
CHD3-213ENST00000571249 POLLQ9UGP5 575 aa9.42□□□□□ -0.9
CHD3-213ENST00000571249 CIZ1Q9ULV3 898 aaPredicted RBP9.42□□□□□ -0.9
CHD3-213ENST00000571249 ZNF646O15015 1829 aaPredicted RBP9.42□□□□□ -0.9
CHD3-213ENST00000571249 TFRCP02786 760 aaKnown RBP9.41□□□□□ -0.9
CHD3-213ENST00000571249 GRK4P32298 578 aa9.41□□□□□ -0.9
CHD3-213ENST00000571249 LACTBP83111 547 aaPredicted RBP9.41□□□□□ -0.9
CHD3-213ENST00000571249 NGEFQ8N5V2 710 aa9.41□□□□□ -0.9
CHD3-213ENST00000571249 IL17REQ8NFR9 667 aa9.41□□□□□ -0.9
CHD3-213ENST00000571249 NLRP3Q96P20 1036 aa9.41□□□□□ -0.9
CHD3-213ENST00000571249 BIN2Q9UBW5 565 aaPredicted RBP9.41□□□□□ -0.9
CHD3-213ENST00000571249 HCN4Q9Y3Q4 1203 aa9.41□□□□□ -0.9
CHD3-213ENST00000571249 SCN9AQ15858 1988 aa9.41□□□□□ -0.9
CHD3-213ENST00000571249 TESPA1A2RU30 521 aaPredicted RBP9.4□□□□□ -0.9
CHD3-213ENST00000571249 C6orf229H3BNL8 230 aa9.4□□□□□ -0.9
CHD3-213ENST00000571249 NTSR2O95665 410 aa9.4□□□□□ -0.9
CHD3-213ENST00000571249 USP17L8P0C7I0 530 aa9.4□□□□□ -0.9
CHD3-213ENST00000571249 MRE11P49959 708 aa9.4□□□□□ -0.9
CHD3-213ENST00000571249 TAF1CQ15572 869 aaPredicted RBP9.4□□□□□ -0.9
CHD3-213ENST00000571249 RSBN1LQ6PCB5 846 aaPredicted RBP9.4□□□□□ -0.9
CHD3-213ENST00000571249 ADAMTS19Q8TE59 1207 aa9.4□□□□□ -0.9
CHD3-213ENST00000571249 GMLQ99445 158 aa9.4□□□□□ -0.9
CHD3-213ENST00000571249 P2RX7Q99572 595 aaKnown RBP9.4□□□□□ -0.9
CHD3-213ENST00000571249 ZFYVE28Q9HCC9 887 aa9.4□□□□□ -0.9
CHD3-213ENST00000571249 NSFL1CQ9UNZ2 370 aaKnown RBP9.4□□□□□ -0.9
CHD3-213ENST00000571249 RIPOR2Q9Y4F9 1068 aa9.4□□□□□ -0.9
CHD3-213ENST00000571249 FOSL2P15408 326 aa9.39□□□□□ -0.91
CHD3-213ENST00000571249 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
CHD3-213ENST00000571249 HS6ST3Q8IZP7 471 aa9.39□□□□□ -0.91
CHD3-213ENST00000571249 FAM43AQ8N2R8 423 aa9.39□□□□□ -0.91
CHD3-213ENST00000571249 MS4A4AQ96JQ5 239 aa9.39□□□□□ -0.91
CHD3-213ENST00000571249 UHRF1Q96T88 793 aaPredicted RBP9.39□□□□□ -0.91
CHD3-213ENST00000571249 C1QTNF1Q9BXJ1 281 aa9.39□□□□□ -0.91
CHD3-213ENST00000571249 TTYH1Q9H313 450 aaPredicted RBP9.39□□□□□ -0.91
CHD3-213ENST00000571249 HMOX1P09601 288 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 IL13P35225 146 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 GPSM2P81274 684 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 POLA2Q14181 598 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 MIER1Q8N108 512 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 AGBL3Q8NEM8 1001 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 RAET1EQ8TD07 263 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 BRI3BPQ8WY22 251 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 TRIM47Q96LD4 638 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 NECAB3Q96P71 396 aaPredicted RBP9.38□□□□□ -0.91
CHD3-213ENST00000571249 DEFB118Q96PH6 123 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 MXD3Q9BW11 206 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 SRRDQ9UH36 339 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 ZDBF2Q9HCK1 2354 aa9.38□□□□□ -0.91
CHD3-213ENST00000571249 WNT10BO00744 389 aa9.37□□□□□ -0.91
CHD3-213ENST00000571249 SASH1O94885 1247 aa9.37□□□□□ -0.91
CHD3-213ENST00000571249 HCLS1P14317 486 aaPredicted RBP9.37□□□□□ -0.91
CHD3-213ENST00000571249 TEFQ10587 303 aa9.37□□□□□ -0.91
CHD3-213ENST00000571249 KIF22Q14807 665 aa9.37□□□□□ -0.91
CHD3-213ENST00000571249 CDCA8Q53HL2 280 aa9.37□□□□□ -0.91
CHD3-213ENST00000571249 TTLL7Q6ZT98 887 aa9.37□□□□□ -0.91
CHD3-213ENST00000571249 EPHX3Q9H6B9 360 aa9.37□□□□□ -0.91
CHD3-213ENST00000571249 SSC5DA1L4H1 1573 aa9.37□□□□□ -0.91
CHD3-213ENST00000571249 OSBPP22059 807 aa9.36□□□□□ -0.91
CHD3-213ENST00000571249 PSMC4P43686 418 aa9.36□□□□□ -0.91
CHD3-213ENST00000571249 PRMT2P55345 433 aa9.36□□□□□ -0.91
CHD3-213ENST00000571249 UBXN2AP68543 259 aa9.36□□□□□ -0.91
CHD3-213ENST00000571249 GRAPQ13588 217 aa9.36□□□□□ -0.91
CHD3-213ENST00000571249 MAP3K11Q16584 847 aa9.36□□□□□ -0.91
CHD3-213ENST00000571249 SLC10A5Q5PT55 438 aa9.36□□□□□ -0.91
CHD3-213ENST00000571249 NECAB2Q7Z6G3 386 aa9.36□□□□□ -0.91
CHD3-213ENST00000571249 ZNF34Q8IZ26 560 aa9.36□□□□□ -0.91
CHD3-213ENST00000571249 GRAPLQ8TC17 118 aaPredicted RBP9.36□□□□□ -0.91
CHD3-213ENST00000571249 COL2A1P02458 1487 aaPredicted RBP9.35□□□□□ -0.91
CHD3-213ENST00000571249 TLR2O60603 784 aa9.35□□□□□ -0.91
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