RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 FRAT1Q92837 279 aaPredicted RBP15.91■□□□□ 0.14
TVP23B-204ENST00000571018 CNNM1Q9NRU3 951 aa15.91■□□□□ 0.14
TVP23B-204ENST00000571018 ADARB2Q9NS39 739 aaKnown RBP15.91■□□□□ 0.14
TVP23B-204ENST00000571018 ADAMTSL1Q8N6G6 1762 aa15.9■□□□□ 0.14
TVP23B-204ENST00000571018 TAF5LO75529 589 aa15.9■□□□□ 0.14
TVP23B-204ENST00000571018 VIL1P09327 827 aaKnown RBP15.9■□□□□ 0.14
TVP23B-204ENST00000571018 RPS12P25398 132 aaKnown RBP15.9■□□□□ 0.14
TVP23B-204ENST00000571018 TXNRD3Q86VQ6 643 aa15.9■□□□□ 0.14
TVP23B-204ENST00000571018 HELBQ8NG08 1087 aaPredicted RBP15.9■□□□□ 0.14
TVP23B-204ENST00000571018 COA1Q9GZY4 146 aa15.9■□□□□ 0.14
TVP23B-204ENST00000571018 CNOT7Q9UIV1 285 aaKnown RBP15.9■□□□□ 0.14
TVP23B-204ENST00000571018 HDAC5Q9UQL6 1122 aa15.9■□□□□ 0.14
TVP23B-204ENST00000571018 CLEC11AQ9Y240 323 aa15.9■□□□□ 0.14
TVP23B-204ENST00000571018 KCNJ4P48050 445 aa15.89■□□□□ 0.13
TVP23B-204ENST00000571018 ZKSCAN2Q63HK3 967 aa15.89■□□□□ 0.13
TVP23B-204ENST00000571018 C15orf52Q6ZUT6 534 aaKnown RBP15.89■□□□□ 0.13
TVP23B-204ENST00000571018 PUS3Q9BZE2 481 aaKnown RBP15.89■□□□□ 0.13
TVP23B-204ENST00000571018 RIPOR2Q9Y4F9 1068 aa15.89■□□□□ 0.13
TVP23B-204ENST00000571018 SNAP23O00161 211 aa15.88■□□□□ 0.13
TVP23B-204ENST00000571018 ITGBL1O95965 494 aaPredicted RBP15.88■□□□□ 0.13
TVP23B-204ENST00000571018 KLRK1P26718 216 aa15.88■□□□□ 0.13
TVP23B-204ENST00000571018 MEIS3Q99687 375 aa15.88■□□□□ 0.13
TVP23B-204ENST00000571018 TNNQ9UQP3 1299 aa15.88■□□□□ 0.13
TVP23B-204ENST00000571018 IRS2Q9Y4H2 1338 aa15.88■□□□□ 0.13
TVP23B-204ENST00000571018 USP17L3A6NCW0 530 aa15.87■□□□□ 0.13
TVP23B-204ENST00000571018 USP17L4A6NCW7 530 aa15.87■□□□□ 0.13
TVP23B-204ENST00000571018 H7C1D1 291 aa15.87■□□□□ 0.13
TVP23B-204ENST00000571018 MAP1SQ66K74 1059 aaPredicted RBP15.87■□□□□ 0.13
TVP23B-204ENST00000571018 USP17L1Q7RTZ2 530 aa15.87■□□□□ 0.13
TVP23B-204ENST00000571018 MICALL2Q8IY33 904 aa15.87■□□□□ 0.13
TVP23B-204ENST00000571018 CLUAP1Q96AJ1 413 aa15.87■□□□□ 0.13
TVP23B-204ENST00000571018 SCN9AQ15858 1988 aa15.87■□□□□ 0.13
TVP23B-204ENST00000571018 ZNF609O15014 1411 aa15.86■□□□□ 0.13
TVP23B-204ENST00000571018 SHTN1A0MZ66 631 aa15.86■□□□□ 0.13
TVP23B-204ENST00000571018 PLIN1O60240 522 aa15.86■□□□□ 0.13
TVP23B-204ENST00000571018 GNAI3P08754 354 aa15.86■□□□□ 0.13
TVP23B-204ENST00000571018 RFX5P48382 616 aaPredicted RBP15.86■□□□□ 0.13
TVP23B-204ENST00000571018 RSBN1LQ6PCB5 846 aaPredicted RBP15.86■□□□□ 0.13
TVP23B-204ENST00000571018 CNTROBQ8N137 903 aa15.86■□□□□ 0.13
TVP23B-204ENST00000571018 AGBL3Q8NEM8 1001 aa15.86■□□□□ 0.13
TVP23B-204ENST00000571018 PGAP2Q9UHJ9 254 aa15.86■□□□□ 0.13
TVP23B-204ENST00000571018 LRRFIP2Q9Y608 721 aaKnown RBP15.86■□□□□ 0.13
TVP23B-204ENST00000571018 MROH5Q6ZUA9 1318 aa15.86■□□□□ 0.13
TVP23B-204ENST00000571018 PASKQ96RG2 1323 aa15.86■□□□□ 0.13
TVP23B-204ENST00000571018 A0A1B0GUL6 1792 aa15.85■□□□□ 0.13
TVP23B-204ENST00000571018 HIRAP54198 1017 aaPredicted RBP15.85■□□□□ 0.13
TVP23B-204ENST00000571018 UBE4AQ14139 1066 aa15.85■□□□□ 0.13
TVP23B-204ENST00000571018 LRRC24Q50LG9 513 aa15.85■□□□□ 0.13
TVP23B-204ENST00000571018 STRIP1Q5VSL9 837 aa15.85■□□□□ 0.13
TVP23B-204ENST00000571018 KLHDC4Q8TBB5 520 aa15.85■□□□□ 0.13
TVP23B-204ENST00000571018 ZC3H15Q8WU90 426 aaKnown RBP15.85■□□□□ 0.13
TVP23B-204ENST00000571018 GMLQ99445 158 aa15.85■□□□□ 0.13
TVP23B-204ENST00000571018 CD209Q9NNX6 404 aa15.85■□□□□ 0.13
TVP23B-204ENST00000571018 HTRA3P83110 453 aa15.84■□□□□ 0.13
TVP23B-204ENST00000571018 PTPN12Q05209 780 aaKnown RBP15.84■□□□□ 0.13
TVP23B-204ENST00000571018 DACT2Q5SW24 774 aa15.84■□□□□ 0.13
TVP23B-204ENST00000571018 SAMD7Q7Z3H4 446 aa15.84■□□□□ 0.13
TVP23B-204ENST00000571018 TMEM57Q8N5G2 664 aa15.84■□□□□ 0.13
TVP23B-204ENST00000571018 DNAJC5GQ8N7S2 189 aa15.84■□□□□ 0.13
TVP23B-204ENST00000571018 TRPM4Q8TD43 1214 aa15.84■□□□□ 0.13
TVP23B-204ENST00000571018 PSME4Q14997 1843 aa15.83■□□□□ 0.12
TVP23B-204ENST00000571018 EYA2O00167 538 aa15.83■□□□□ 0.12
TVP23B-204ENST00000571018 ZNF280AP59817 542 aaPredicted RBP15.83■□□□□ 0.12
TVP23B-204ENST00000571018 METTL24Q5JXM2 366 aa15.83■□□□□ 0.12
TVP23B-204ENST00000571018 ZNF804AQ7Z570 1209 aa15.83■□□□□ 0.12
TVP23B-204ENST00000571018 VGLL2Q8N8G2 317 aa15.83■□□□□ 0.12
TVP23B-204ENST00000571018 FBXO3Q9UK99 471 aa15.83■□□□□ 0.12
TVP23B-204ENST00000571018 PDE8BO95263 885 aa15.82■□□□□ 0.12
TVP23B-204ENST00000571018 EGFRP00533 1210 aa15.82■□□□□ 0.12
TVP23B-204ENST00000571018 USP17L8P0C7I0 530 aa15.82■□□□□ 0.12
TVP23B-204ENST00000571018 IL1R1P14778 569 aa15.82■□□□□ 0.12
TVP23B-204ENST00000571018 MTX1Q13505 466 aa15.82■□□□□ 0.12
TVP23B-204ENST00000571018 TBC1D10BQ4KMP7 808 aaPredicted RBP15.82■□□□□ 0.12
TVP23B-204ENST00000571018 TTLL5Q6EMB2 1281 aa15.82■□□□□ 0.12
TVP23B-204ENST00000571018 DZIP1LQ8IYY4 767 aaKnown RBP15.82■□□□□ 0.12
TVP23B-204ENST00000571018 MYO3BQ8WXR4 1341 aa15.82■□□□□ 0.12
TVP23B-204ENST00000571018 GTF2IP78347 998 aa15.81■□□□□ 0.12
TVP23B-204ENST00000571018 ATG9AQ7Z3C6 839 aa15.81■□□□□ 0.12
TVP23B-204ENST00000571018 CREBZFQ9NS37 354 aa15.81■□□□□ 0.12
TVP23B-204ENST00000571018 CIAO1O76071 339 aa15.8■□□□□ 0.12
TVP23B-204ENST00000571018 GNAI2P04899 355 aa15.8■□□□□ 0.12
TVP23B-204ENST00000571018 HIBADHP31937 336 aaKnown RBP15.8■□□□□ 0.12
TVP23B-204ENST00000571018 KIF4BQ2VIQ3 1234 aa15.8■□□□□ 0.12
TVP23B-204ENST00000571018 RBM26Q5T8P6 1007 aaKnown RBP15.8■□□□□ 0.12
TVP23B-204ENST00000571018 FTSJ3Q8IY81 847 aaKnown RBP15.8■□□□□ 0.12
TVP23B-204ENST00000571018 FBXW7Q969H0 707 aa15.8■□□□□ 0.12
TVP23B-204ENST00000571018 FAM84BQ96KN1 310 aaPredicted RBP15.8■□□□□ 0.12
TVP23B-204ENST00000571018 MXD3Q9BW11 206 aa15.8■□□□□ 0.12
TVP23B-204ENST00000571018 COPRSQ9NQ92 184 aa15.8■□□□□ 0.12
TVP23B-204ENST00000571018 TMEM88BA6NKF7 163 aa15.79■□□□□ 0.12
TVP23B-204ENST00000571018 RLBP1P12271 317 aa15.79■□□□□ 0.12
TVP23B-204ENST00000571018 FGFR2P21802 821 aa15.79■□□□□ 0.12
TVP23B-204ENST00000571018 GYG1P46976 350 aa15.79■□□□□ 0.12
TVP23B-204ENST00000571018 MMP14P50281 582 aa15.79■□□□□ 0.12
TVP23B-204ENST00000571018 CDC37L1Q7L3B6 337 aa15.79■□□□□ 0.12
TVP23B-204ENST00000571018 TDRD7Q8NHU6 1098 aaKnown RBP15.79■□□□□ 0.12
TVP23B-204ENST00000571018 ZNF646O15015 1829 aaPredicted RBP15.79■□□□□ 0.12
TVP23B-204ENST00000571018 SRGAP3O43295 1099 aa15.78■□□□□ 0.12
TVP23B-204ENST00000571018 SASH1O94885 1247 aa15.78■□□□□ 0.12
TVP23B-204ENST00000571018 FKBP1AP62942 108 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms