RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 HSP90AB3PQ58FF7 597 aa8.48□□□□□ -1.05
SMG6-204ENST00000570606 PPP4R3BQ5MIZ7 849 aa8.48□□□□□ -1.05
SMG6-204ENST00000570606 CNTROBQ8N137 903 aa8.48□□□□□ -1.05
SMG6-204ENST00000570606 THSD7BQ9C0I4 1608 aa8.47□□□□□ -1.05
SMG6-204ENST00000570606 LRRC37AA6NMS7 1700 aa8.47□□□□□ -1.05
SMG6-204ENST00000570606 FOXN1O15353 648 aa8.47□□□□□ -1.05
SMG6-204ENST00000570606 ITGBL1O95965 494 aaPredicted RBP8.47□□□□□ -1.05
SMG6-204ENST00000570606 HOXB1P14653 301 aaPredicted RBP8.47□□□□□ -1.05
SMG6-204ENST00000570606 SSTR3P32745 418 aaPredicted RBP8.47□□□□□ -1.05
SMG6-204ENST00000570606 WDR43Q15061 677 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMG6-204ENST00000570606 CCDC146Q8IYE0 955 aa8.47□□□□□ -1.05
SMG6-204ENST00000570606 SUPT20HQ8NEM7 779 aa8.47□□□□□ -1.05
SMG6-204ENST00000570606 XAGE3Q8WTP9 111 aa8.47□□□□□ -1.05
SMG6-204ENST00000570606 NLRP7Q8WX94 980 aa8.47□□□□□ -1.05
SMG6-204ENST00000570606 FAM217BQ9NTX9 383 aaPredicted RBP8.47□□□□□ -1.05
SMG6-204ENST00000570606 BABAM1Q9NWV8 329 aa8.47□□□□□ -1.05
SMG6-204ENST00000570606 FAM198AQ9UFP1 575 aa8.47□□□□□ -1.05
SMG6-204ENST00000570606 LAS1LQ9Y4W2 734 aaKnown RBP8.47□□□□□ -1.05
SMG6-204ENST00000570606 MYBBP1AQ9BQG0 1328 aaKnown RBP8.47□□□□□ -1.05
SMG6-204ENST00000570606 HCLS1P14317 486 aaPredicted RBP8.46□□□□□ -1.06
SMG6-204ENST00000570606 EPS15P42566 896 aa8.46□□□□□ -1.06
SMG6-204ENST00000570606 CTCFP49711 727 aaPredicted RBP8.46□□□□□ -1.06
SMG6-204ENST00000570606 SCNN1DP51172 638 aa8.46□□□□□ -1.06
SMG6-204ENST00000570606 DEFB115Q30KQ5 88 aa8.46□□□□□ -1.06
SMG6-204ENST00000570606 DPP8Q6V1X1 898 aaPredicted RBP8.46□□□□□ -1.06
SMG6-204ENST00000570606 DDX46Q7L014 1031 aaKnown RBP8.46□□□□□ -1.06
SMG6-204ENST00000570606 COPS6Q7L5N1 327 aa8.46□□□□□ -1.06
SMG6-204ENST00000570606 LRP10Q7Z4F1 713 aa8.46□□□□□ -1.06
SMG6-204ENST00000570606 DDX21Q9NR30 783 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMG6-204ENST00000570606 TRMT112Q9UI30 125 aaKnown RBP8.46□□□□□ -1.06
SMG6-204ENST00000570606 ATP6V0A2Q9Y487 856 aa8.46□□□□□ -1.06
SMG6-204ENST00000570606 SH3TC1Q8TE82 1336 aa8.46□□□□□ -1.06
SMG6-204ENST00000570606 RASSF10A6NK89 507 aa8.45□□□□□ -1.06
SMG6-204ENST00000570606 PPP1R3GB7ZBB8 358 aa8.45□□□□□ -1.06
SMG6-204ENST00000570606 SNPHO15079 494 aa8.45□□□□□ -1.06
SMG6-204ENST00000570606 GRM1Q13255 1194 aa8.45□□□□□ -1.06
SMG6-204ENST00000570606 GRAPQ13588 217 aa8.45□□□□□ -1.06
SMG6-204ENST00000570606 HDGFL1Q5TGJ6 251 aa8.45□□□□□ -1.06
SMG6-204ENST00000570606 USP50Q70EL3 339 aaPredicted RBP8.45□□□□□ -1.06
SMG6-204ENST00000570606 NLRP10Q86W26 655 aa8.45□□□□□ -1.06
SMG6-204ENST00000570606 GRAPLQ8TC17 118 aaPredicted RBP8.45□□□□□ -1.06
SMG6-204ENST00000570606 ADARB2Q9NS39 739 aaKnown RBP8.45□□□□□ -1.06
SMG6-204ENST00000570606 CHPF2Q9P2E5 772 aa8.45□□□□□ -1.06
SMG6-204ENST00000570606 DUOX1Q9NRD9 1551 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 KRT24Q2M2I5 525 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 SH3D19Q5HYK7 790 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 SLC10A5Q5PT55 438 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 MPNDQ8N594 471 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 ZNF428Q96B54 188 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 RUNDC1Q96C34 613 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 BCL2L13Q9BXK5 485 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 VPS33BQ9H267 617 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 PRDM10Q9NQV6 1147 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 WBP1LQ9NX94 342 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 GPRC5DQ9NZD1 345 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 TSKSQ9UJT2 592 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 ZNRF3Q9ULT6 936 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 CDHR2Q9BYE9 1310 aa8.44□□□□□ -1.06
SMG6-204ENST00000570606 WDR33Q9C0J8 1336 aaKnown RBP8.44□□□□□ -1.06
SMG6-204ENST00000570606 TRAF5O00463 557 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 BBOX1O75936 387 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 HOXB7P09629 217 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 PTPREP23469 700 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 ECE1P42892 770 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 GMPSP49915 693 aaPredicted RBP8.43□□□□□ -1.06
SMG6-204ENST00000570606 LBX1P52954 281 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 MAP2K1Q02750 393 aaPredicted RBP8.43□□□□□ -1.06
SMG6-204ENST00000570606 FMR1Q06787 632 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMG6-204ENST00000570606 KIAA2012Q0VF49 1180 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 DDX10Q13206 875 aaKnown RBP8.43□□□□□ -1.06
SMG6-204ENST00000570606 TCIRG1Q13488 830 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 CIAPIN1Q6FI81 312 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 TMC4Q7Z404 712 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 SP8Q8IXZ3 490 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 OTUD5Q96G74 571 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 CAPNS2Q96L46 248 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 BEGAINQ9BUH8 593 aa8.43□□□□□ -1.06
SMG6-204ENST00000570606 RTFDC1Q9BY42 306 aaPredicted RBP8.43□□□□□ -1.06
SMG6-204ENST00000570606 CHL1O00533 1208 aa8.42□□□□□ -1.06
SMG6-204ENST00000570606 RAD17O75943 681 aa8.42□□□□□ -1.06
SMG6-204ENST00000570606 CELF2O95319 508 aaKnown RBP8.42□□□□□ -1.06
SMG6-204ENST00000570606 HSPA8P11142 646 aaKnown RBP8.42□□□□□ -1.06
SMG6-204ENST00000570606 CXCL9Q07325 125 aa8.42□□□□□ -1.06
SMG6-204ENST00000570606 TNIP1Q15025 636 aa8.42□□□□□ -1.06
SMG6-204ENST00000570606 CYP4F22Q6NT55 531 aa8.42□□□□□ -1.06
SMG6-204ENST00000570606 PLBD2Q8NHP8 589 aa8.42□□□□□ -1.06
SMG6-204ENST00000570606 ZNF408Q9H9D4 720 aa8.42□□□□□ -1.06
SMG6-204ENST00000570606 DBF4Q9UBU7 674 aaPredicted RBP8.42□□□□□ -1.06
SMG6-204ENST00000570606 SPEF2Q9C093 1822 aa8.42□□□□□ -1.06
SMG6-204ENST00000570606 POLR2AP24928 1970 aaKnown RBP8.42□□□□□ -1.06
SMG6-204ENST00000570606 MYH3P11055 1940 aa8.41□□□□□ -1.06
SMG6-204ENST00000570606 C3orf80F5H4A9 247 aa8.41□□□□□ -1.06
SMG6-204ENST00000570606 ATP5J2-PTCD1G3V325 749 aa8.41□□□□□ -1.06
SMG6-204ENST00000570606 RTL5Q5HYW3 569 aaPredicted RBP8.41□□□□□ -1.06
SMG6-204ENST00000570606 TRPM4Q8TD43 1214 aa8.41□□□□□ -1.06
SMG6-204ENST00000570606 FAM89AQ96GI7 184 aa8.41□□□□□ -1.06
SMG6-204ENST00000570606 GLIS2Q9BZE0 524 aaPredicted RBP8.41□□□□□ -1.06
SMG6-204ENST00000570606 HYPKQ9NX55 129 aa8.41□□□□□ -1.06
SMG6-204ENST00000570606 TLL2Q9Y6L7 1015 aa8.41□□□□□ -1.06
SMG6-204ENST00000570606 COL4A1P02462 1669 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms