RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 SPEF2Q9C093 1822 aa26.97■■□□□ 1.91
PKD1-240ENST00000570253 PAPPA2Q9BXP8 1791 aa26.97■■□□□ 1.91
PKD1-240ENST00000570253 IGKV5-2P06315 115 aa26.97■■□□□ 1.91
PKD1-240ENST00000570253 MMP14P50281 582 aa26.97■■□□□ 1.91
PKD1-240ENST00000570253 CCT4P50991 539 aaKnown RBP26.97■■□□□ 1.91
PKD1-240ENST00000570253 TWISTNBQ3B726 338 aaPredicted RBP26.97■■□□□ 1.91
PKD1-240ENST00000570253 GMLQ99445 158 aa26.97■■□□□ 1.91
PKD1-240ENST00000570253 GREM2Q9H772 168 aa26.97■■□□□ 1.91
PKD1-240ENST00000570253 TSR2Q969E8 191 aaKnown RBP26.96■■□□□ 1.91
PKD1-240ENST00000570253 COA1Q9GZY4 146 aa26.96■■□□□ 1.91
PKD1-240ENST00000570253 LEMD3Q9Y2U8 911 aa26.96■■□□□ 1.91
PKD1-240ENST00000570253 NEURL1BA8MQ27 555 aa26.95■■□□□ 1.9
PKD1-240ENST00000570253 TTLL12Q14166 644 aaPredicted RBP26.95■■□□□ 1.9
PKD1-240ENST00000570253 CWF19L2Q2TBE0 894 aaKnown RBP26.95■■□□□ 1.9
PKD1-240ENST00000570253 UBE3BQ7Z3V4 1068 aa26.95■■□□□ 1.9
PKD1-240ENST00000570253 MPHOSPH8Q99549 860 aa26.95■■□□□ 1.9
PKD1-240ENST00000570253 ANKRD2Q9GZV1 360 aa26.95■■□□□ 1.9
PKD1-240ENST00000570253 MYH16Q9H6N6 1097 aa26.95■■□□□ 1.9
PKD1-240ENST00000570253 SLC4A2P04920 1241 aa26.94■■□□□ 1.9
PKD1-240ENST00000570253 CCDC27Q2M243 656 aa26.94■■□□□ 1.9
PKD1-240ENST00000570253 STRIP1Q5VSL9 837 aa26.94■■□□□ 1.9
PKD1-240ENST00000570253 RASAL3Q86YV0 1011 aa26.94■■□□□ 1.9
PKD1-240ENST00000570253 CSRNP1Q96S65 589 aa26.94■■□□□ 1.9
PKD1-240ENST00000570253 HDAC9Q9UKV0 1011 aa26.94■■□□□ 1.9
PKD1-240ENST00000570253 KCNJ4P48050 445 aa26.93■■□□□ 1.9
PKD1-240ENST00000570253 H7C1W4 665 aa26.91■■□□□ 1.9
PKD1-240ENST00000570253 DACT2Q5SW24 774 aa26.91■■□□□ 1.9
PKD1-240ENST00000570253 ITGA6P23229 1130 aa26.9■■□□□ 1.9
PKD1-240ENST00000570253 FKBP5Q13451 457 aaPredicted RBP26.9■■□□□ 1.9
PKD1-240ENST00000570253 ZNF804BA4D1E1 1349 aa26.9■■□□□ 1.9
PKD1-240ENST00000570253 IL16Q14005 1332 aa26.9■■□□□ 1.9
PKD1-240ENST00000570253 NBPF9Q3BBW0 867 aa26.89■■□□□ 1.9
PKD1-240ENST00000570253 TTLL5Q6EMB2 1281 aa26.89■■□□□ 1.9
PKD1-240ENST00000570253 CTU1Q7Z7A3 348 aaKnown RBP26.89■■□□□ 1.9
PKD1-240ENST00000570253 WWC1Q8IX03 1113 aa26.89■■□□□ 1.9
PKD1-240ENST00000570253 PLA2G12BQ9BX93 195 aa26.89■■□□□ 1.9
PKD1-240ENST00000570253 FLIIQ13045 1269 aa26.88■■□□□ 1.89
PKD1-240ENST00000570253 GCKRQ14397 625 aa26.88■■□□□ 1.89
PKD1-240ENST00000570253 APOBEC3FQ8IUX4 373 aaKnown RBP26.88■■□□□ 1.89
PKD1-240ENST00000570253 WNT10BO00744 389 aa26.87■■□□□ 1.89
PKD1-240ENST00000570253 DNAAF4Q8WXU2 420 aa26.87■■□□□ 1.89
PKD1-240ENST00000570253 UBE2Q2LH0YL09 131 aa26.86■■□□□ 1.89
PKD1-240ENST00000570253 G2E3Q7L622 706 aa26.86■■□□□ 1.89
PKD1-240ENST00000570253 ARMC9Q7Z3E5 817 aa26.86■■□□□ 1.89
PKD1-240ENST00000570253 LINS1Q8NG48 757 aa26.86■■□□□ 1.89
PKD1-240ENST00000570253 CACNA1FO60840 1977 aa26.86■■□□□ 1.89
PKD1-240ENST00000570253 ANKRD18BA2A2Z9 1011 aa26.85■■□□□ 1.89
PKD1-240ENST00000570253 MXD3Q9BW11 206 aa26.85■■□□□ 1.89
PKD1-240ENST00000570253 SCAF8Q9UPN6 1271 aaKnown RBP26.85■■□□□ 1.89
PKD1-240ENST00000570253 SREBF2Q12772 1141 aa26.84■■□□□ 1.89
PKD1-240ENST00000570253 NCBP3Q53F19 620 aaKnown RBP26.84■■□□□ 1.89
PKD1-240ENST00000570253 PRAMEF18Q5VWM3 479 aa26.84■■□□□ 1.89
PKD1-240ENST00000570253 WTIPA6NIX2 430 aaPredicted RBP26.83■■□□□ 1.89
PKD1-240ENST00000570253 SASH1O94885 1247 aa26.83■■□□□ 1.89
PKD1-240ENST00000570253 GTF2IP78347 998 aa26.83■■□□□ 1.89
PKD1-240ENST00000570253 MOB2Q70IA6 237 aa26.83■■□□□ 1.89
PKD1-240ENST00000570253 KIAA0825Q8IV33 1275 aa26.83■■□□□ 1.89
PKD1-240ENST00000570253 CHRNDQ07001 517 aa26.82■■□□□ 1.88
PKD1-240ENST00000570253 PKN2Q16513 984 aaKnown RBP26.82■■□□□ 1.88
PKD1-240ENST00000570253 TXNRD3Q86VQ6 643 aa26.82■■□□□ 1.88
PKD1-240ENST00000570253 CHMP3Q9Y3E7 222 aa26.82■■□□□ 1.88
PKD1-240ENST00000570253 CSF1RP07333 972 aa26.81■■□□□ 1.88
PKD1-240ENST00000570253 IFIT5Q13325 482 aaKnown RBP26.8■■□□□ 1.88
PKD1-240ENST00000570253 DLGAP5Q15398 846 aa26.8■■□□□ 1.88
PKD1-240ENST00000570253 COL1A1P02452 1464 aaPredicted RBP26.8■■□□□ 1.88
PKD1-240ENST00000570253 MYO1BO43795 1136 aa26.79■■□□□ 1.88
PKD1-240ENST00000570253 SOX10P56693 466 aa26.79■■□□□ 1.88
PKD1-240ENST00000570253 ZNF804AQ7Z570 1209 aa26.79■■□□□ 1.88
PKD1-240ENST00000570253 CD209Q9NNX6 404 aa26.79■■□□□ 1.88
PKD1-240ENST00000570253 FANCIQ9NVI1 1328 aa26.79■■□□□ 1.88
PKD1-240ENST00000570253 ZNF646O15015 1829 aaPredicted RBP26.79■■□□□ 1.88
PKD1-240ENST00000570253 SLC34A2O95436 690 aa26.78■■□□□ 1.88
PKD1-240ENST00000570253 TM4SF4P48230 202 aa26.78■■□□□ 1.88
PKD1-240ENST00000570253 PRKG1Q13976 671 aa26.78■■□□□ 1.88
PKD1-240ENST00000570253 TBC1D8O95759 1140 aa26.77■■□□□ 1.88
PKD1-240ENST00000570253 KLRK1P26718 216 aa26.77■■□□□ 1.88
PKD1-240ENST00000570253 CASP7P55210 303 aa26.77■■□□□ 1.88
PKD1-240ENST00000570253 MKRN3Q13064 507 aaKnown RBP26.77■■□□□ 1.88
PKD1-240ENST00000570253 TAF7LQ5H9L4 462 aa26.77■■□□□ 1.88
PKD1-240ENST00000570253 MRS2Q9HD23 443 aa26.77■■□□□ 1.88
PKD1-240ENST00000570253 WDR63Q8IWG1 891 aa26.76■■□□□ 1.87
PKD1-240ENST00000570253 ZNF296Q8WUU4 475 aaPredicted RBP26.76■■□□□ 1.87
PKD1-240ENST00000570253 ANGEL1Q9UNK9 670 aaKnown RBP26.76■■□□□ 1.87
PKD1-240ENST00000570253 ALDH1A1P00352 501 aa26.75■■□□□ 1.87
PKD1-240ENST00000570253 CCDC184Q52MB2 194 aa26.75■■□□□ 1.87
PKD1-240ENST00000570253 PPP2R3BQ9Y5P8 575 aa26.75■■□□□ 1.87
PKD1-240ENST00000570253 PPP1R12BO60237 982 aaPredicted RBP26.74■■□□□ 1.87
PKD1-240ENST00000570253 PTPN12Q05209 780 aaKnown RBP26.74■■□□□ 1.87
PKD1-240ENST00000570253 CCDC57Q2TAC2 916 aa26.74■■□□□ 1.87
PKD1-240ENST00000570253 NOM1Q5C9Z4 860 aaKnown RBP26.74■■□□□ 1.87
PKD1-240ENST00000570253 C15orf52Q6ZUT6 534 aaKnown RBP26.74■■□□□ 1.87
PKD1-240ENST00000570253 GPR25O00155 361 aa26.73■■□□□ 1.87
PKD1-240ENST00000570253 VAMP4O75379 141 aa26.73■■□□□ 1.87
PKD1-240ENST00000570253 TAF5LO75529 589 aa26.73■■□□□ 1.87
PKD1-240ENST00000570253 DEFB129Q9H1M3 183 aa26.73■■□□□ 1.87
PKD1-240ENST00000570253 HPS5Q9UPZ3 1129 aa26.73■■□□□ 1.87
PKD1-240ENST00000570253 SALL2Q9Y467 1007 aaPredicted RBP26.73■■□□□ 1.87
PKD1-240ENST00000570253 EXOSC9Q06265 439 aaKnown RBP26.72■■□□□ 1.87
PKD1-240ENST00000570253 MTMR14Q8NCE2 650 aa26.72■■□□□ 1.87
PKD1-240ENST00000570253 HELBQ8NG08 1087 aaPredicted RBP26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms