RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 DMRTB1Q96MA1 342 aa5.92□□□□□ -1.46
UBR1-211ENST00000569971 FAM129BQ96TA1 746 aa5.92□□□□□ -1.46
UBR1-211ENST00000569971 FAM13BQ9NYF5 915 aa5.92□□□□□ -1.46
UBR1-211ENST00000569971 GPR182O15218 404 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 RECKO95980 971 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 LDHBP07195 334 aaKnown RBP5.91□□□□□ -1.46
UBR1-211ENST00000569971 MZF1P28698 734 aaPredicted RBP5.91□□□□□ -1.46
UBR1-211ENST00000569971 ZAP70P43403 619 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 ARSDP51689 593 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 NRLP54845 237 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 PDE3BQ13370 1112 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 TSNAXIP1Q2TAA8 658 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 DHX32Q7L7V1 743 aaKnown RBP5.91□□□□□ -1.46
UBR1-211ENST00000569971 MAP4K3Q8IVH8 894 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 BACH2Q9BYV9 841 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 IGFLR1Q9H665 355 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 RNF19AQ9NV58 838 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 WWC3Q9ULE0 1092 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 BCS1LQ9Y276 419 aa5.91□□□□□ -1.46
UBR1-211ENST00000569971 EGFRP00533 1210 aa5.9□□□□□ -1.46
UBR1-211ENST00000569971 PDGFAP04085 211 aa5.9□□□□□ -1.46
UBR1-211ENST00000569971 HOXD8P13378 290 aaPredicted RBP5.9□□□□□ -1.46
UBR1-211ENST00000569971 TREML1Q86YW5 311 aa5.9□□□□□ -1.46
UBR1-211ENST00000569971 CACTIN-AS1Q8N1I8 211 aa5.9□□□□□ -1.46
UBR1-211ENST00000569971 GPR152Q8TDT2 470 aa5.9□□□□□ -1.46
UBR1-211ENST00000569971 FAM161BQ96MY7 647 aa5.9□□□□□ -1.46
UBR1-211ENST00000569971 SETDB2Q96T68 719 aa5.9□□□□□ -1.46
UBR1-211ENST00000569971 DUSP9Q99956 384 aaKnown RBP5.9□□□□□ -1.46
UBR1-211ENST00000569971 USP35Q9P2H5 1018 aa5.9□□□□□ -1.46
UBR1-211ENST00000569971 GRNP28799 593 aaKnown RBP5.89□□□□□ -1.47
UBR1-211ENST00000569971 NOS3P29474 1203 aa5.89□□□□□ -1.47
UBR1-211ENST00000569971 IDH3AP50213 366 aa5.89□□□□□ -1.47
UBR1-211ENST00000569971 XPCQ01831 940 aaPredicted RBP5.89□□□□□ -1.47
UBR1-211ENST00000569971 MRPL58Q14197 206 aaKnown RBP5.89□□□□□ -1.47
UBR1-211ENST00000569971 PERM1Q5SV97 790 aa5.89□□□□□ -1.47
UBR1-211ENST00000569971 ELMSAN1Q6PJG2 1045 aa5.89□□□□□ -1.47
UBR1-211ENST00000569971 PRR23CQ6ZRP0 262 aa5.89□□□□□ -1.47
UBR1-211ENST00000569971 DZIP1LQ8IYY4 767 aaKnown RBP5.89□□□□□ -1.47
UBR1-211ENST00000569971 GJD3Q8N144 294 aa5.89□□□□□ -1.47
UBR1-211ENST00000569971 TMEM130Q8N3G9 435 aa5.89□□□□□ -1.47
UBR1-211ENST00000569971 BCL11AQ9H165 835 aa5.89□□□□□ -1.47
UBR1-211ENST00000569971 PARP2Q9UGN5 583 aa5.89□□□□□ -1.47
UBR1-211ENST00000569971 DLL1O00548 723 aa5.88□□□□□ -1.47
UBR1-211ENST00000569971 GSC2O15499 205 aa5.88□□□□□ -1.47
UBR1-211ENST00000569971 PRPF40AO75400 957 aaKnown RBP5.88□□□□□ -1.47
UBR1-211ENST00000569971 MICAL2O94851 1124 aa5.88□□□□□ -1.47
UBR1-211ENST00000569971 CPB1P15086 417 aa5.88□□□□□ -1.47
UBR1-211ENST00000569971 SOX18P35713 384 aa5.88□□□□□ -1.47
UBR1-211ENST00000569971 USP5P45974 858 aa5.88□□□□□ -1.47
UBR1-211ENST00000569971 IREB2P48200 963 aaKnown RBP5.88□□□□□ -1.47
UBR1-211ENST00000569971 LDLRAD1Q5T700 205 aa5.88□□□□□ -1.47
UBR1-211ENST00000569971 TTC16Q8NEE8 873 aa5.88□□□□□ -1.47
UBR1-211ENST00000569971 ALKBH8Q96BT7 664 aaKnown RBP5.88□□□□□ -1.47
UBR1-211ENST00000569971 MRPL18Q9H0U6 180 aaKnown RBP5.88□□□□□ -1.47
UBR1-211ENST00000569971 GGNBP2Q9H3C7 697 aa5.88□□□□□ -1.47
UBR1-211ENST00000569971 OPLAHO14841 1288 aa5.87□□□□□ -1.47
UBR1-211ENST00000569971 RARAP10276 462 aa5.87□□□□□ -1.47
UBR1-211ENST00000569971 ENOX2Q16206 610 aaKnown RBP5.87□□□□□ -1.47
UBR1-211ENST00000569971 Q6ZS46 218 aa5.87□□□□□ -1.47
UBR1-211ENST00000569971 NUDT16Q96DE0 195 aaKnown RBP5.87□□□□□ -1.47
UBR1-211ENST00000569971 MEGF10Q96KG7 1140 aa5.87□□□□□ -1.47
UBR1-211ENST00000569971 ZFATQ9P243 1243 aa5.87□□□□□ -1.47
UBR1-211ENST00000569971 PNMA6FA0A0J9YX94 578 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 A6NHS1 94 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 BTBD11A6QL63 1104 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 ZBTB42B2RXF5 422 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 DEAF1O75398 565 aaPredicted RBP5.86□□□□□ -1.47
UBR1-211ENST00000569971 PCSK2P16519 638 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 FGD1P98174 961 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 ATP2B2Q01814 1243 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 PSMD2Q13200 908 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 C8orf34Q49A92 452 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 C9orf131Q5VYM1 1079 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 MCTP1Q6DN14 999 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 TMC4Q7Z404 712 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 MUC3BQ9H195 1237 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 AKTIPQ9H8T0 292 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 GOLGA2P5Q9HBQ8 144 aa5.86□□□□□ -1.47
UBR1-211ENST00000569971 TLR7Q9NYK1 1049 aaKnown RBP5.86□□□□□ -1.47
UBR1-211ENST00000569971 FNDC3AQ9Y2H6 1198 aaKnown RBP5.86□□□□□ -1.47
UBR1-211ENST00000569971 DAB2P98082 770 aa5.85□□□□□ -1.47
UBR1-211ENST00000569971 PLAURQ03405 335 aa5.85□□□□□ -1.47
UBR1-211ENST00000569971 ORC1Q13415 861 aa5.85□□□□□ -1.47
UBR1-211ENST00000569971 CSRNP1Q96S65 589 aa5.85□□□□□ -1.47
UBR1-211ENST00000569971 SMG9Q9H0W8 520 aaKnown RBP5.85□□□□□ -1.47
UBR1-211ENST00000569971 RBSNQ9H1K0 784 aa5.85□□□□□ -1.47
UBR1-211ENST00000569971 MRS2Q9HD23 443 aa5.85□□□□□ -1.47
UBR1-211ENST00000569971 COL17A1Q9UMD9 1497 aaPredicted RBP5.84□□□□□ -1.47
UBR1-211ENST00000569971 SCAMP3O14828 347 aaKnown RBP5.84□□□□□ -1.47
UBR1-211ENST00000569971 SORBS3O60504 671 aa5.84□□□□□ -1.47
UBR1-211ENST00000569971 RPLP1P05386 114 aaKnown RBP5.84□□□□□ -1.47
UBR1-211ENST00000569971 FSTP19883 344 aa5.84□□□□□ -1.47
UBR1-211ENST00000569971 CD97P48960 835 aa5.84□□□□□ -1.47
UBR1-211ENST00000569971 HDLBPQ00341 1268 aaKnown RBP5.84□□□□□ -1.47
UBR1-211ENST00000569971 ALG1LQ6GMV1 187 aa5.84□□□□□ -1.47
UBR1-211ENST00000569971 TMEM87AQ8NBN3 555 aa5.84□□□□□ -1.47
UBR1-211ENST00000569971 PIK3R5Q8WYR1 880 aa5.84□□□□□ -1.47
UBR1-211ENST00000569971 VTI1BQ9UEU0 232 aa5.84□□□□□ -1.47
UBR1-211ENST00000569971 USP20Q9Y2K6 914 aa5.84□□□□□ -1.47
UBR1-211ENST00000569971 SHROOM4Q9ULL8 1493 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms