RNA–Protein interactions for RNA: ENST00000569783.1

CDH11-218, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-218ENST00000569783 ZIC5Q96T25 663 aa24.74■■□□□ 1.55
CDH11-218ENST00000569783 MPHOSPH8Q99549 860 aa24.74■■□□□ 1.55
CDH11-218ENST00000569783 LEMD3Q9Y2U8 911 aa24.74■■□□□ 1.55
CDH11-218ENST00000569783 PITPNM2Q9BZ72 1349 aa24.73■■□□□ 1.55
CDH11-218ENST00000569783 FAM155AB1AL88 458 aaPredicted RBP24.73■■□□□ 1.55
CDH11-218ENST00000569783 DNAAF4Q8WXU2 420 aa24.73■■□□□ 1.55
CDH11-218ENST00000569783 COA1Q9GZY4 146 aa24.73■■□□□ 1.55
CDH11-218ENST00000569783 POLR2AP24928 1970 aaKnown RBP24.73■■□□□ 1.55
CDH11-218ENST00000569783 MYO3BQ8WXR4 1341 aa24.72■■□□□ 1.55
CDH11-218ENST00000569783 ANP32CO43423 234 aa24.72■■□□□ 1.55
CDH11-218ENST00000569783 ITGA6P23229 1130 aa24.72■■□□□ 1.55
CDH11-218ENST00000569783 PLA2G12BQ9BX93 195 aa24.72■■□□□ 1.55
CDH11-218ENST00000569783 ANKRD2Q9GZV1 360 aa24.72■■□□□ 1.55
CDH11-218ENST00000569783 FANCIQ9NVI1 1328 aa24.71■■□□□ 1.55
CDH11-218ENST00000569783 WTIPA6NIX2 430 aaPredicted RBP24.71■■□□□ 1.55
CDH11-218ENST00000569783 KIF23Q02241 960 aaPredicted RBP24.71■■□□□ 1.55
CDH11-218ENST00000569783 LINS1Q8NG48 757 aa24.71■■□□□ 1.55
CDH11-218ENST00000569783 SALL2Q9Y467 1007 aaPredicted RBP24.71■■□□□ 1.55
CDH11-218ENST00000569783 FKBP1BP68106 108 aa24.7■■□□□ 1.54
CDH11-218ENST00000569783 STRIP1Q5VSL9 837 aa24.7■■□□□ 1.54
CDH11-218ENST00000569783 WDR63Q8IWG1 891 aa24.7■■□□□ 1.54
CDH11-218ENST00000569783 SAGE1Q9NXZ1 904 aa24.7■■□□□ 1.54
CDH11-218ENST00000569783 MYH3P11055 1940 aa24.7■■□□□ 1.54
CDH11-218ENST00000569783 ZNF804BA4D1E1 1349 aa24.69■■□□□ 1.54
CDH11-218ENST00000569783 SLC10A3P09131 477 aa24.69■■□□□ 1.54
CDH11-218ENST00000569783 KCNJ4P48050 445 aa24.69■■□□□ 1.54
CDH11-218ENST00000569783 FAM161AQ3B820 660 aa24.69■■□□□ 1.54
CDH11-218ENST00000569783 DACT2Q5SW24 774 aa24.69■■□□□ 1.54
CDH11-218ENST00000569783 MCOLN1Q9GZU1 580 aa24.69■■□□□ 1.54
CDH11-218ENST00000569783 PSME4Q14997 1843 aa24.68■■□□□ 1.54
CDH11-218ENST00000569783 DGKZQ13574 1117 aa24.68■■□□□ 1.54
CDH11-218ENST00000569783 ANKRD18BA2A2Z9 1011 aa24.67■■□□□ 1.54
CDH11-218ENST00000569783 CSF1RP07333 972 aa24.67■■□□□ 1.54
CDH11-218ENST00000569783 MMP14P50281 582 aa24.67■■□□□ 1.54
CDH11-218ENST00000569783 TTLL5Q6EMB2 1281 aa24.67■■□□□ 1.54
CDH11-218ENST00000569783 REM2Q8IYK8 340 aaPredicted RBP24.67■■□□□ 1.54
CDH11-218ENST00000569783 VAMP4O75379 141 aa24.66■■□□□ 1.54
CDH11-218ENST00000569783 CASP7P55210 303 aa24.66■■□□□ 1.54
CDH11-218ENST00000569783 MXD3Q9BW11 206 aa24.66■■□□□ 1.54
CDH11-218ENST00000569783 HDAC9Q9UKV0 1011 aa24.66■■□□□ 1.54
CDH11-218ENST00000569783 SPEF2Q9C093 1822 aa24.65■■□□□ 1.54
CDH11-218ENST00000569783 TRPA1O75762 1119 aa24.65■■□□□ 1.54
CDH11-218ENST00000569783 NF2P35240 595 aa24.65■■□□□ 1.54
CDH11-218ENST00000569783 EXOSC9Q06265 439 aaKnown RBP24.65■■□□□ 1.54
CDH11-218ENST00000569783 NBPF9Q3BBW0 867 aa24.65■■□□□ 1.54
CDH11-218ENST00000569783 TXNRD3Q86VQ6 643 aa24.65■■□□□ 1.54
CDH11-218ENST00000569783 WNT10BO00744 389 aa24.64■■□□□ 1.54
CDH11-218ENST00000569783 ZEB1P37275 1124 aaPredicted RBP24.64■■□□□ 1.54
CDH11-218ENST00000569783 CHRNDQ07001 517 aa24.64■■□□□ 1.54
CDH11-218ENST00000569783 RASAL3Q86YV0 1011 aa24.64■■□□□ 1.54
CDH11-218ENST00000569783 CSRNP1Q96S65 589 aa24.64■■□□□ 1.54
CDH11-218ENST00000569783 RNF186Q9NXI6 227 aa24.64■■□□□ 1.54
CDH11-218ENST00000569783 SCAF8Q9UPN6 1271 aaKnown RBP24.64■■□□□ 1.54
CDH11-218ENST00000569783 CASP8AP2Q9UKL3 1982 aa24.63■■□□□ 1.53
CDH11-218ENST00000569783 IFIT5Q13325 482 aaKnown RBP24.63■■□□□ 1.53
CDH11-218ENST00000569783 TTLL12Q14166 644 aaPredicted RBP24.63■■□□□ 1.53
CDH11-218ENST00000569783 CHMP3Q9Y3E7 222 aa24.63■■□□□ 1.53
CDH11-218ENST00000569783 GTF2IP78347 998 aa24.62■■□□□ 1.53
CDH11-218ENST00000569783 KIAA0825Q8IV33 1275 aa24.62■■□□□ 1.53
CDH11-218ENST00000569783 PAPPA2Q9BXP8 1791 aa24.62■■□□□ 1.53
CDH11-218ENST00000569783 KLRK1P26718 216 aa24.61■■□□□ 1.53
CDH11-218ENST00000569783 PRAMEF18Q5VWM3 479 aa24.61■■□□□ 1.53
CDH11-218ENST00000569783 F6X3S4 739 aa24.6■■□□□ 1.53
CDH11-218ENST00000569783 SASH1O94885 1247 aa24.6■■□□□ 1.53
CDH11-218ENST00000569783 MLLT1Q03111 559 aaPredicted RBP24.6■■□□□ 1.53
CDH11-218ENST00000569783 UBE2Q2LH0YL09 131 aa24.59■■□□□ 1.53
CDH11-218ENST00000569783 BEND3Q5T5X7 828 aa24.59■■□□□ 1.53
CDH11-218ENST00000569783 MOB2Q70IA6 237 aa24.59■■□□□ 1.53
CDH11-218ENST00000569783 APOBEC3FQ8IUX4 373 aaKnown RBP24.59■■□□□ 1.53
CDH11-218ENST00000569783 CD209Q9NNX6 404 aa24.59■■□□□ 1.53
CDH11-218ENST00000569783 CACNA1FO60840 1977 aa24.59■■□□□ 1.53
CDH11-218ENST00000569783 TAF5LO75529 589 aa24.58■■□□□ 1.53
CDH11-218ENST00000569783 FOXO4P98177 505 aa24.58■■□□□ 1.53
CDH11-218ENST00000569783 CCDC57Q2TAC2 916 aa24.58■■□□□ 1.53
CDH11-218ENST00000569783 TAF7LQ5H9L4 462 aa24.58■■□□□ 1.53
CDH11-218ENST00000569783 ZNF316A6NFI3 1004 aaPredicted RBP24.57■■□□□ 1.52
CDH11-218ENST00000569783 RGS19P49795 217 aa24.57■■□□□ 1.52
CDH11-218ENST00000569783 ZNF804AQ7Z570 1209 aa24.57■■□□□ 1.52
CDH11-218ENST00000569783 HELBQ8NG08 1087 aaPredicted RBP24.57■■□□□ 1.52
CDH11-218ENST00000569783 LMBR1LQ6UX01 489 aa24.56■■□□□ 1.52
CDH11-218ENST00000569783 C15orf52Q6ZUT6 534 aaKnown RBP24.56■■□□□ 1.52
CDH11-218ENST00000569783 ARMC9Q7Z3E5 817 aa24.56■■□□□ 1.52
CDH11-218ENST00000569783 C9orf78Q9NZ63 289 aaPredicted RBP24.56■■□□□ 1.52
CDH11-218ENST00000569783 AKAP11Q9UKA4 1901 aa24.55■■□□□ 1.52
CDH11-218ENST00000569783 GRM8O00222 908 aa24.55■■□□□ 1.52
CDH11-218ENST00000569783 DLGAP5Q15398 846 aa24.55■■□□□ 1.52
CDH11-218ENST00000569783 FAM9BQ8IZU0 186 aa24.55■■□□□ 1.52
CDH11-218ENST00000569783 SNAP23O00161 211 aa24.54■■□□□ 1.52
CDH11-218ENST00000569783 LDHAL6AQ6ZMR3 332 aa24.54■■□□□ 1.52
CDH11-218ENST00000569783 CNNM1Q9NRU3 951 aa24.54■■□□□ 1.52
CDH11-218ENST00000569783 SLC4A10Q6U841 1118 aa24.53■■□□□ 1.52
CDH11-218ENST00000569783 SPINK5Q9NQ38 1064 aaPredicted RBP24.53■■□□□ 1.52
CDH11-218ENST00000569783 MYO1BO43795 1136 aa24.52■■□□□ 1.52
CDH11-218ENST00000569783 PLIN1O60240 522 aa24.52■■□□□ 1.52
CDH11-218ENST00000569783 PRKG1Q13976 671 aa24.52■■□□□ 1.52
CDH11-218ENST00000569783 ALDH1L1O75891 902 aa24.51■■□□□ 1.51
CDH11-218ENST00000569783 IL1R1P14778 569 aa24.51■■□□□ 1.51
CDH11-218ENST00000569783 CTU1Q7Z7A3 348 aaKnown RBP24.51■■□□□ 1.51
CDH11-218ENST00000569783 ZBED3Q96IU2 234 aaPredicted RBP24.51■■□□□ 1.51
CDH11-218ENST00000569783 SRCIN1Q9C0H9 1055 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms