RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 LINS1Q8NG48 757 aa16.74■□□□□ 0.27
SPG7-221ENST00000569720 CCDC102AQ96A19 550 aa16.74■□□□□ 0.27
SPG7-221ENST00000569720 MPHOSPH8Q99549 860 aa16.74■□□□□ 0.27
SPG7-221ENST00000569720 ANKRD2Q9GZV1 360 aa16.74■□□□□ 0.27
SPG7-221ENST00000569720 MYOZ2Q9NPC6 264 aa16.74■□□□□ 0.27
SPG7-221ENST00000569720 TSKSQ9UJT2 592 aa16.74■□□□□ 0.27
SPG7-221ENST00000569720 LEMD3Q9Y2U8 911 aa16.74■□□□□ 0.27
SPG7-221ENST00000569720 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
SPG7-221ENST00000569720 ITGA6P23229 1130 aa16.73■□□□□ 0.27
SPG7-221ENST00000569720 ANGEL2Q5VTE6 544 aaKnown RBP16.73■□□□□ 0.27
SPG7-221ENST00000569720 ABHD8Q96I13 439 aa16.73■□□□□ 0.27
SPG7-221ENST00000569720 GMLQ99445 158 aa16.73■□□□□ 0.27
SPG7-221ENST00000569720 CASP8AP2Q9UKL3 1982 aa16.72■□□□□ 0.27
SPG7-221ENST00000569720 VAMP4O75379 141 aa16.72■□□□□ 0.27
SPG7-221ENST00000569720 ZNF157P51786 506 aaPredicted RBP16.72■□□□□ 0.27
SPG7-221ENST00000569720 DIEXFQ68CQ4 756 aaKnown RBP16.72■□□□□ 0.27
SPG7-221ENST00000569720 OGFOD1Q8N543 542 aa16.72■□□□□ 0.27
SPG7-221ENST00000569720 FBXW7Q969H0 707 aa16.72■□□□□ 0.27
SPG7-221ENST00000569720 CDCA5Q96FF9 252 aa16.72■□□□□ 0.27
SPG7-221ENST00000569720 COA1Q9GZY4 146 aa16.72■□□□□ 0.27
SPG7-221ENST00000569720 AKAP11Q9UKA4 1901 aa16.72■□□□□ 0.27
SPG7-221ENST00000569720 ASTN2O75129 1339 aaPredicted RBP16.71■□□□□ 0.27
SPG7-221ENST00000569720 MYO3BQ8WXR4 1341 aa16.71■□□□□ 0.27
SPG7-221ENST00000569720 PITPNM2Q9BZ72 1349 aa16.71■□□□□ 0.27
SPG7-221ENST00000569720 EXOSC9Q06265 439 aaKnown RBP16.71■□□□□ 0.27
SPG7-221ENST00000569720 FAM161AQ3B820 660 aa16.71■□□□□ 0.27
SPG7-221ENST00000569720 ZNF804BA4D1E1 1349 aa16.7■□□□□ 0.26
SPG7-221ENST00000569720 WTIPA6NIX2 430 aaPredicted RBP16.7■□□□□ 0.26
SPG7-221ENST00000569720 CSF1RP07333 972 aa16.7■□□□□ 0.26
SPG7-221ENST00000569720 KCNJ4P48050 445 aa16.7■□□□□ 0.26
SPG7-221ENST00000569720 MMP14P50281 582 aa16.7■□□□□ 0.26
SPG7-221ENST00000569720 CASP7P55210 303 aa16.7■□□□□ 0.26
SPG7-221ENST00000569720 STRIP1Q5VSL9 837 aa16.7■□□□□ 0.26
SPG7-221ENST00000569720 ZNF646O15015 1829 aaPredicted RBP16.69■□□□□ 0.26
SPG7-221ENST00000569720 ANKRD18BA2A2Z9 1011 aa16.69■□□□□ 0.26
SPG7-221ENST00000569720 FAM155AB1AL88 458 aaPredicted RBP16.69■□□□□ 0.26
SPG7-221ENST00000569720 FKBP1BP68106 108 aa16.69■□□□□ 0.26
SPG7-221ENST00000569720 DACT2Q5SW24 774 aa16.69■□□□□ 0.26
SPG7-221ENST00000569720 ZIC5Q96T25 663 aa16.69■□□□□ 0.26
SPG7-221ENST00000569720 KIF23Q02241 960 aaPredicted RBP16.68■□□□□ 0.26
SPG7-221ENST00000569720 CHMP3Q9Y3E7 222 aa16.68■□□□□ 0.26
SPG7-221ENST00000569720 PAPPA2Q9BXP8 1791 aa16.68■□□□□ 0.26
SPG7-221ENST00000569720 SLC10A3P09131 477 aa16.67■□□□□ 0.26
SPG7-221ENST00000569720 CHRNDQ07001 517 aa16.67■□□□□ 0.26
SPG7-221ENST00000569720 IFIT5Q13325 482 aaKnown RBP16.67■□□□□ 0.26
SPG7-221ENST00000569720 TTLL5Q6EMB2 1281 aa16.67■□□□□ 0.26
SPG7-221ENST00000569720 TXNRD3Q86VQ6 643 aa16.67■□□□□ 0.26
SPG7-221ENST00000569720 SAGE1Q9NXZ1 904 aa16.67■□□□□ 0.26
SPG7-221ENST00000569720 HDAC9Q9UKV0 1011 aa16.67■□□□□ 0.26
SPG7-221ENST00000569720 NF2P35240 595 aa16.66■□□□□ 0.26
SPG7-221ENST00000569720 NBPF9Q3BBW0 867 aa16.66■□□□□ 0.26
SPG7-221ENST00000569720 BEND3Q5T5X7 828 aa16.66■□□□□ 0.26
SPG7-221ENST00000569720 REM2Q8IYK8 340 aaPredicted RBP16.66■□□□□ 0.26
SPG7-221ENST00000569720 FAM9BQ8IZU0 186 aa16.66■□□□□ 0.26
SPG7-221ENST00000569720 MXD3Q9BW11 206 aa16.66■□□□□ 0.26
SPG7-221ENST00000569720 A0A1B0GUL6 1792 aa16.65■□□□□ 0.26
SPG7-221ENST00000569720 CCDC85CA6NKD9 419 aa16.65■□□□□ 0.26
SPG7-221ENST00000569720 F6X3S4 739 aa16.65■□□□□ 0.26
SPG7-221ENST00000569720 WNT10BO00744 389 aa16.65■□□□□ 0.26
SPG7-221ENST00000569720 KLRK1P26718 216 aa16.64■□□□□ 0.25
SPG7-221ENST00000569720 GTF2IP78347 998 aa16.64■□□□□ 0.25
SPG7-221ENST00000569720 FOXO4P98177 505 aa16.64■□□□□ 0.25
SPG7-221ENST00000569720 DGKZQ13574 1117 aa16.64■□□□□ 0.25
SPG7-221ENST00000569720 TTLL12Q14166 644 aaPredicted RBP16.64■□□□□ 0.25
SPG7-221ENST00000569720 CCDC57Q2TAC2 916 aa16.64■□□□□ 0.25
SPG7-221ENST00000569720 TAF7LQ5H9L4 462 aa16.64■□□□□ 0.25
SPG7-221ENST00000569720 MCOLN1Q9GZU1 580 aa16.64■□□□□ 0.25
SPG7-221ENST00000569720 C9orf78Q9NZ63 289 aaPredicted RBP16.64■□□□□ 0.25
SPG7-221ENST00000569720 GRM8O00222 908 aa16.63■□□□□ 0.25
SPG7-221ENST00000569720 TRPA1O75762 1119 aa16.63■□□□□ 0.25
SPG7-221ENST00000569720 ZNF804AQ7Z570 1209 aa16.63■□□□□ 0.25
SPG7-221ENST00000569720 RASAL3Q86YV0 1011 aa16.63■□□□□ 0.25
SPG7-221ENST00000569720 KIAA0825Q8IV33 1275 aa16.63■□□□□ 0.25
SPG7-221ENST00000569720 CSRNP1Q96S65 589 aa16.63■□□□□ 0.25
SPG7-221ENST00000569720 CD209Q9NNX6 404 aa16.63■□□□□ 0.25
SPG7-221ENST00000569720 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
SPG7-221ENST00000569720 RNF186Q9NXI6 227 aa16.63■□□□□ 0.25
SPG7-221ENST00000569720 TAF5LO75529 589 aa16.62■□□□□ 0.25
SPG7-221ENST00000569720 ALDH1L1O75891 902 aa16.62■□□□□ 0.25
SPG7-221ENST00000569720 SASH1O94885 1247 aa16.62■□□□□ 0.25
SPG7-221ENST00000569720 LMBR1LQ6UX01 489 aa16.62■□□□□ 0.25
SPG7-221ENST00000569720 C15orf52Q6ZUT6 534 aaKnown RBP16.62■□□□□ 0.25
SPG7-221ENST00000569720 APOBEC3FQ8IUX4 373 aaKnown RBP16.62■□□□□ 0.25
SPG7-221ENST00000569720 HELBQ8NG08 1087 aaPredicted RBP16.62■□□□□ 0.25
SPG7-221ENST00000569720 SCAF8Q9UPN6 1271 aaKnown RBP16.62■□□□□ 0.25
SPG7-221ENST00000569720 ECM29Q5VYK3 1845 aa16.61■□□□□ 0.25
SPG7-221ENST00000569720 PRAMEF18Q5VWM3 479 aa16.61■□□□□ 0.25
SPG7-221ENST00000569720 SLC4A10Q6U841 1118 aa16.61■□□□□ 0.25
SPG7-221ENST00000569720 LDHAL6AQ6ZMR3 332 aa16.61■□□□□ 0.25
SPG7-221ENST00000569720 SRCIN1Q9C0H9 1055 aa16.61■□□□□ 0.25
SPG7-221ENST00000569720 CNNM1Q9NRU3 951 aa16.61■□□□□ 0.25
SPG7-221ENST00000569720 UBE2Q2LH0YL09 131 aa16.6■□□□□ 0.25
SPG7-221ENST00000569720 DLGAP5Q15398 846 aa16.6■□□□□ 0.25
SPG7-221ENST00000569720 SNAP23O00161 211 aa16.59■□□□□ 0.25
SPG7-221ENST00000569720 PLIN1O60240 522 aa16.59■□□□□ 0.25
SPG7-221ENST00000569720 IL1R1P14778 569 aa16.59■□□□□ 0.25
SPG7-221ENST00000569720 MOB2Q70IA6 237 aa16.59■□□□□ 0.25
SPG7-221ENST00000569720 ARMC9Q7Z3E5 817 aa16.59■□□□□ 0.25
SPG7-221ENST00000569720 COL1A1P02452 1464 aaPredicted RBP16.59■□□□□ 0.25
SPG7-221ENST00000569720 EPHA10Q5JZY3 1008 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms