RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 SNX21Q969T3 373 aa13.2□□□□□ -0.3
PDXDC1-216ENST00000569715 ARID4AP29374 1257 aaPredicted RBP13.19□□□□□ -0.3
PDXDC1-216ENST00000569715 HSCBQ8IWL3 235 aa13.19□□□□□ -0.3
PDXDC1-216ENST00000569715 MCCP23508 829 aa13.19□□□□□ -0.3
PDXDC1-216ENST00000569715 BCAMP50895 628 aa13.19□□□□□ -0.3
PDXDC1-216ENST00000569715 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
PDXDC1-216ENST00000569715 NRXN2Q9P2S2 1712 aa13.19□□□□□ -0.3
PDXDC1-216ENST00000569715 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
PDXDC1-216ENST00000569715 ZNF512BQ96KM6 892 aaPredicted RBP13.19□□□□□ -0.3
PDXDC1-216ENST00000569715 CYP2E1P05181 493 aaPredicted RBP13.18□□□□□ -0.3
PDXDC1-216ENST00000569715 ST5P78524 1137 aa13.18□□□□□ -0.3
PDXDC1-216ENST00000569715 RASGRF1Q13972 1273 aa13.18□□□□□ -0.3
PDXDC1-216ENST00000569715 EPB41L2O43491 1005 aaKnown RBP13.18□□□□□ -0.3
PDXDC1-216ENST00000569715 KLRK1P26718 216 aa13.18□□□□□ -0.3
PDXDC1-216ENST00000569715 PIH1D3Q9NQM4 214 aaKnown RBP13.18□□□□□ -0.3
PDXDC1-216ENST00000569715 HMG20BQ9P0W2 317 aa13.18□□□□□ -0.3
PDXDC1-216ENST00000569715 HMGB2P26583 209 aaKnown RBP13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 DEFB132Q7Z7B7 95 aa13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 SNX14Q9Y5W7 946 aa13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 DOCK2Q92608 1830 aa13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 GYG1P46976 350 aa13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 CRY2Q49AN0 593 aa13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 PRPF40BQ6NWY9 871 aaKnown RBP13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 IQSEC3Q9UPP2 1182 aaPredicted RBP13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 RBM8AQ9Y5S9 174 aaKnown RBP13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 ANAPC15P60006 121 aa13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 GRAPQ13588 217 aa13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 GRAPLQ8TC17 118 aaPredicted RBP13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 MAP4K1Q92918 833 aa13.17□□□□□ -0.3
PDXDC1-216ENST00000569715 MAST3O60307 1309 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 UQCRFS1P1P0C7P4 283 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 MCMDC2Q4G0Z9 681 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 M0R2C6 588 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 NLGN1Q8N2Q7 840 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 SPATA5Q8NB90 893 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 IL17RAQ96F46 866 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 UPF3BQ9BZI7 483 aaKnown RBP13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 MMP10P09238 476 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 UBE4AQ14139 1066 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 FLAD1Q8NFF5 587 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 RPGRQ92834 1020 aaKnown RBP13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 OSBP2Q969R2 916 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 TAF6LQ9Y6J9 622 aa13.16□□□□□ -0.3
PDXDC1-216ENST00000569715 COL11A2P13942 1736 aaPredicted RBP13.15□□□□□ -0.3
PDXDC1-216ENST00000569715 SLC15A2Q16348 729 aa13.15□□□□□ -0.3
PDXDC1-216ENST00000569715 VPS53Q5VIR6 699 aa13.15□□□□□ -0.3
PDXDC1-216ENST00000569715 NEK4P51957 841 aa13.15□□□□□ -0.3
PDXDC1-216ENST00000569715 K7ELQ4 463 aaPredicted RBP13.15□□□□□ -0.31
PDXDC1-216ENST00000569715 HELLSQ9NRZ9 838 aa13.15□□□□□ -0.31
PDXDC1-216ENST00000569715 QSER1Q2KHR3 1735 aa13.14□□□□□ -0.31
PDXDC1-216ENST00000569715 ZNF804BA4D1E1 1349 aa13.14□□□□□ -0.31
PDXDC1-216ENST00000569715 MYH13Q9UKX3 1938 aa13.14□□□□□ -0.31
PDXDC1-216ENST00000569715 KCNJ4P48050 445 aa13.14□□□□□ -0.31
PDXDC1-216ENST00000569715 CREB3L3Q68CJ9 461 aa13.14□□□□□ -0.31
PDXDC1-216ENST00000569715 IDH1O75874 414 aaKnown RBP13.14□□□□□ -0.31
PDXDC1-216ENST00000569715 COL9A3Q14050 684 aaPredicted RBP13.14□□□□□ -0.31
PDXDC1-216ENST00000569715 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
PDXDC1-216ENST00000569715 WWC3Q9ULE0 1092 aa13.14□□□□□ -0.31
PDXDC1-216ENST00000569715 FAM84BQ96KN1 310 aaPredicted RBP13.14□□□□□ -0.31
PDXDC1-216ENST00000569715 PDGFDQ9GZP0 370 aaPredicted RBP13.14□□□□□ -0.31
PDXDC1-216ENST00000569715 SLC27A2O14975 620 aa13.13□□□□□ -0.31
PDXDC1-216ENST00000569715 CPA1P15085 419 aa13.13□□□□□ -0.31
PDXDC1-216ENST00000569715 WASHC4Q2M389 1173 aa13.13□□□□□ -0.31
PDXDC1-216ENST00000569715 TXNRD3Q86VQ6 643 aa13.13□□□□□ -0.31
PDXDC1-216ENST00000569715 KCNB2Q92953 911 aa13.13□□□□□ -0.31
PDXDC1-216ENST00000569715 PUS7LQ9H0K6 701 aaKnown RBP13.13□□□□□ -0.31
PDXDC1-216ENST00000569715 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
PDXDC1-216ENST00000569715 ANKRD2Q9GZV1 360 aa13.13□□□□□ -0.31
PDXDC1-216ENST00000569715 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
PDXDC1-216ENST00000569715 KLRG2A4D1S0 409 aaPredicted RBP13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 ST18O60284 1047 aa13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 ADD2P35612 726 aa13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 TTF1Q15361 905 aaPredicted RBP13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 SLC9C2Q5TAH2 1124 aa13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 GPR101Q96P66 508 aaPredicted RBP13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 IRS2Q9Y4H2 1338 aa13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 CACNA1SQ13698 1873 aa13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 ZFYP08048 801 aaPredicted RBP13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 NOL8Q76FK4 1167 aaKnown RBP13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 TICAM2Q86XR7 235 aa13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 RBM17Q96I25 401 aaKnown RBP13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 ANKIB1Q9P2G1 1089 aa13.12□□□□□ -0.31
PDXDC1-216ENST00000569715 GOLGB1Q14789 3259 aaKnown RBP13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 A0A0G2JLW4 131 aa13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 FOXP2O15409 715 aa13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 PDE6AP16499 860 aa13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 BAG6P46379 1132 aa13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 APPBP2Q92624 585 aa13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.11□□□□□ -0.318e-7■■□□□ 14.4
PDXDC1-216ENST00000569715 PARP3Q9Y6F1 533 aa13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 SF3B2Q13435 895 aaKnown RBP13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 JAKMIP1Q96N16 626 aaKnown RBP13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 LRRC37AA6NMS7 1700 aa13.11□□□□□ -0.31
PDXDC1-216ENST00000569715 ZNF532Q9HCE3 1301 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms