RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 ANKRD1Q15327 319 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 AMHR2Q16671 573 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 LRRFIP1Q32MZ4 808 aaKnown RBP6.44□□□□□ -1.38
SF3B3-213ENST00000569687 ZMYM1Q5SVZ6 1142 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 PARP9Q8IXQ6 854 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 FAM89AQ96GI7 184 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 JAKMIP1Q96N16 626 aaKnown RBP6.44□□□□□ -1.38
SF3B3-213ENST00000569687 NEUROD6Q96NK8 337 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 PHF12Q96QT6 1004 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 PUS3Q9BZE2 481 aaKnown RBP6.44□□□□□ -1.38
SF3B3-213ENST00000569687 PAG1Q9NWQ8 432 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-213ENST00000569687 SH3TC1Q8TE82 1336 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 WDR33Q9C0J8 1336 aaKnown RBP6.44□□□□□ -1.38
SF3B3-213ENST00000569687 PALLDQ8WX93 1383 aa6.44□□□□□ -1.38
SF3B3-213ENST00000569687 RPAP1Q9BWH6 1393 aaPredicted RBP6.44□□□□□ -1.38
SF3B3-213ENST00000569687 ITGB4P16144 1822 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 ANKRD18BA2A2Z9 1011 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 GOLGA6L3A6NEY3 463 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 IRS4O14654 1257 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-213ENST00000569687 RNF113AO15541 343 aaKnown RBP6.43□□□□□ -1.38
SF3B3-213ENST00000569687 ONECUT3O60422 494 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-213ENST00000569687 PDE8AO60658 829 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 ZFYP08048 801 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-213ENST00000569687 IFIT1P09914 478 aaKnown RBP6.43□□□□□ -1.38
SF3B3-213ENST00000569687 HSP90B1P14625 803 aaKnown RBP6.43□□□□□ -1.38
SF3B3-213ENST00000569687 CASTP20810 708 aaKnown RBP6.43□□□□□ -1.38
SF3B3-213ENST00000569687 RPS6KB1P23443 525 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 MRE11P49959 708 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 FXR2P51116 673 aaKnown RBP eCLIP6.43□□□□□ -1.383e-6■■■□□ 17
SF3B3-213ENST00000569687 PKP1Q13835 747 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 ADCK5Q3MIX3 580 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 CCDC158Q5M9N0 1113 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 DZIP3Q86Y13 1208 aaKnown RBP6.43□□□□□ -1.38
SF3B3-213ENST00000569687 FBXO41Q8TF61 875 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 XAGE2Q96GT9 111 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 ZNF594Q96JF6 807 aaPredicted RBP6.43□□□□□ -1.38
SF3B3-213ENST00000569687 DSCC1Q9BVC3 393 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 CCDC87Q9NVE4 849 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 ZBTB1Q9Y2K1 713 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 CHMP3Q9Y3E7 222 aa6.43□□□□□ -1.38
SF3B3-213ENST00000569687 AFDNP55196 1824 aaKnown RBP6.42□□□□□ -1.38
SF3B3-213ENST00000569687 LOC102724428A0A0B4J2F2 783 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 A0A0G2JS52 829 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 GRXCR2A6NFK2 248 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 HMGB1P09429 215 aaKnown RBP6.42□□□□□ -1.38
SF3B3-213ENST00000569687 XRCC6P12956 609 aaKnown RBP eCLIP6.42□□□□□ -1.38
SF3B3-213ENST00000569687 KCNJ4P48050 445 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 CTSWP56202 376 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 SIK1P57059 783 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 ZNF445P59923 1031 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 PARP10Q53GL7 1025 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 BLOC1S2Q6QNY1 142 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 CLEC4GQ6UXB4 293 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 ZNF589Q86UQ0 364 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-213ENST00000569687 FBXL16Q8N461 479 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 VGLL2Q8N8G2 317 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 TMEM87AQ8NBN3 555 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 SYTL4Q96C24 671 aaPredicted RBP6.42□□□□□ -1.38
SF3B3-213ENST00000569687 EDC3Q96F86 508 aaKnown RBP6.42□□□□□ -1.38
SF3B3-213ENST00000569687 ACSBG1Q96GR2 724 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 NEK1Q96PY6 1258 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 QTRT2Q9H974 415 aaKnown RBP6.42□□□□□ -1.38
SF3B3-213ENST00000569687 TRMT112Q9UI30 125 aaKnown RBP6.42□□□□□ -1.38
SF3B3-213ENST00000569687 TRPC6Q9Y210 931 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 RTL9Q8NET4 1388 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 TJP1Q07157 1748 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 ZNF609O15014 1411 aa6.42□□□□□ -1.38
SF3B3-213ENST00000569687 AK9Q5TCS8 1911 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 GOLIM4O00461 696 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 PRPF40AO75400 957 aaKnown RBP6.41□□□□□ -1.38
SF3B3-213ENST00000569687 CAMTA2O94983 1202 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 PDE8BO95263 885 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 ZSCAN22P10073 491 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-213ENST00000569687 SYT1P21579 422 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 FGFR2P21802 821 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 ITGA6P23229 1130 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 ATP6V1AP38606 617 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 CRKLP46109 303 aaKnown RBP6.41□□□□□ -1.38
SF3B3-213ENST00000569687 EXOSC10Q01780 885 aaKnown RBP6.41□□□□□ -1.38
SF3B3-213ENST00000569687 ITPK1Q13572 414 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 ME3Q16798 604 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 TAF7LQ5H9L4 462 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 SLC10A5Q5PT55 438 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 RC3H1Q5TC82 1133 aaKnown RBP6.41□□□□□ -1.38
SF3B3-213ENST00000569687 SUSD4Q5VX71 490 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 ZNF772Q68DY9 489 aaPredicted RBP6.41□□□□□ -1.38
SF3B3-213ENST00000569687 MCTP1Q6DN14 999 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 LDHAL6AQ6ZMR3 332 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 DDX46Q7L014 1031 aaKnown RBP6.41□□□□□ -1.38
SF3B3-213ENST00000569687 SYNE4Q8N205 404 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 CHMP4CQ96CF2 233 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 DNAJC2Q99543 621 aaKnown RBP6.41□□□□□ -1.38
SF3B3-213ENST00000569687 UTP14AQ9BVJ6 771 aaKnown RBP6.41□□□□□ -1.38
SF3B3-213ENST00000569687 AGXT2Q9BYV1 514 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 GREM2Q9H772 168 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 CTNNA3Q9UI47 895 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 TPCN1Q9ULQ1 816 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 TBC1D2BQ9UPU7 963 aa6.41□□□□□ -1.38
SF3B3-213ENST00000569687 SMC3Q9UQE7 1217 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms