RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 POLMQ9NP87 494 aaPredicted RBP8.54□□□□□ -1.04
LINC00556-201ENST00000569603 GPSM3Q9Y4H4 160 aa8.54□□□□□ -1.04
LINC00556-201ENST00000569603 CHD4Q14839 1912 aa8.53□□□□□ -1.04
LINC00556-201ENST00000569603 TAF1LQ8IZX4 1826 aa8.53□□□□□ -1.04
LINC00556-201ENST00000569603 CDC14CA4D256 554 aa8.53□□□□□ -1.04
LINC00556-201ENST00000569603 LILRA1O75019 489 aa8.53□□□□□ -1.04
LINC00556-201ENST00000569603 ADD1P35611 737 aaKnown RBP8.53□□□□□ -1.04
LINC00556-201ENST00000569603 RRS1Q15050 365 aaKnown RBP8.53□□□□□ -1.04
LINC00556-201ENST00000569603 NBPF20Q3BBV1 942 aa8.53□□□□□ -1.04
LINC00556-201ENST00000569603 FOXD4L5Q5VV16 416 aaPredicted RBP8.53□□□□□ -1.04
LINC00556-201ENST00000569603 VWA5B2Q8N398 1253 aa8.53□□□□□ -1.04
LINC00556-201ENST00000569603 WHAMMQ8TF30 809 aa8.53□□□□□ -1.04
LINC00556-201ENST00000569603 DDRGK1Q96HY6 314 aa8.53□□□□□ -1.04
LINC00556-201ENST00000569603 GGNBP2Q9H3C7 697 aa8.53□□□□□ -1.04
LINC00556-201ENST00000569603 STK32BQ9NY57 414 aa8.53□□□□□ -1.04
LINC00556-201ENST00000569603 ADAMTS8Q9UP79 889 aa8.53□□□□□ -1.04
LINC00556-201ENST00000569603 MAP2P11137 1827 aaKnown RBP8.52□□□□□ -1.04
LINC00556-201ENST00000569603 ITGB4P16144 1822 aa8.52□□□□□ -1.04
LINC00556-201ENST00000569603 FLT4P35916 1363 aa8.52□□□□□ -1.05
LINC00556-201ENST00000569603 ERVH48-1M5A8F1 160 aa8.52□□□□□ -1.05
LINC00556-201ENST00000569603 ADH1AP07327 375 aa8.52□□□□□ -1.05
LINC00556-201ENST00000569603 TMF1P82094 1093 aa8.52□□□□□ -1.05
LINC00556-201ENST00000569603 HSP90AB2PQ58FF8 381 aa8.52□□□□□ -1.05
LINC00556-201ENST00000569603 SLC27A3Q5K4L6 730 aa8.52□□□□□ -1.05
LINC00556-201ENST00000569603 LTV1Q96GA3 475 aaPredicted RBP8.52□□□□□ -1.05
LINC00556-201ENST00000569603 SYT17Q9BSW7 474 aa8.52□□□□□ -1.05
LINC00556-201ENST00000569603 CGNL1Q0VF96 1302 aa8.52□□□□□ -1.05
LINC00556-201ENST00000569603 PNPLA7Q6ZV29 1317 aa8.52□□□□□ -1.05
LINC00556-201ENST00000569603 C5P01031 1676 aa8.51□□□□□ -1.05
LINC00556-201ENST00000569603 BRD2P25440 801 aaKnown RBP8.51□□□□□ -1.05
LINC00556-201ENST00000569603 TMEM151AQ8N4L1 468 aa8.51□□□□□ -1.05
LINC00556-201ENST00000569603 ZCRB1Q8TBF4 217 aaKnown RBP8.51□□□□□ -1.05
LINC00556-201ENST00000569603 FHDC1Q9C0D6 1143 aaPredicted RBP8.51□□□□□ -1.05
LINC00556-201ENST00000569603 CLSPNQ9HAW4 1339 aa8.51□□□□□ -1.05
LINC00556-201ENST00000569603 ESPNB1AK53 854 aa8.5□□□□□ -1.05
LINC00556-201ENST00000569603 CYP27B1O15528 508 aa8.5□□□□□ -1.05
LINC00556-201ENST00000569603 AMPHP49418 695 aa8.5□□□□□ -1.05
LINC00556-201ENST00000569603 DZIP3Q86Y13 1208 aaKnown RBP8.5□□□□□ -1.05
LINC00556-201ENST00000569603 SVOPQ8N4V2 548 aa8.5□□□□□ -1.05
LINC00556-201ENST00000569603 DDX54Q8TDD1 881 aaKnown RBP8.5□□□□□ -1.05
LINC00556-201ENST00000569603 NSD3Q9BZ95 1437 aa8.5□□□□□ -1.05
LINC00556-201ENST00000569603 PPP1R1BQ9UD71 204 aaPredicted RBP8.5□□□□□ -1.05
LINC00556-201ENST00000569603 RNF225M0QZC1 329 aaPredicted RBP8.49□□□□□ -1.05
LINC00556-201ENST00000569603 IGSF3O75054 1194 aa8.49□□□□□ -1.05
LINC00556-201ENST00000569603 SLURP2P0DP57 97 aa8.49□□□□□ -1.05
LINC00556-201ENST00000569603 YY1P25490 414 aa8.49□□□□□ -1.05
LINC00556-201ENST00000569603 KCNQ4P56696 695 aa8.49□□□□□ -1.05
LINC00556-201ENST00000569603 RASSF7Q02833 373 aa8.49□□□□□ -1.05
LINC00556-201ENST00000569603 SV2AQ7L0J3 742 aa8.49□□□□□ -1.05
LINC00556-201ENST00000569603 USHBP1Q8N6Y0 703 aa8.49□□□□□ -1.05
LINC00556-201ENST00000569603 UBR3Q6ZT12 1888 aa8.49□□□□□ -1.05
LINC00556-201ENST00000569603 SMG6Q86US8 1419 aaKnown RBP8.48□□□□□ -1.05
LINC00556-201ENST00000569603 RFC5P40937 340 aa8.48□□□□□ -1.05
LINC00556-201ENST00000569603 PTGIRP43119 386 aa8.48□□□□□ -1.05
LINC00556-201ENST00000569603 CDCA8Q53HL2 280 aa8.48□□□□□ -1.05
LINC00556-201ENST00000569603 TRIM34Q9BYJ4 488 aa8.48□□□□□ -1.05
LINC00556-201ENST00000569603 CUEDC1Q9NWM3 386 aaPredicted RBP8.48□□□□□ -1.05
LINC00556-201ENST00000569603 WASHC2AQ641Q2 1341 aa8.48□□□□□ -1.05
LINC00556-201ENST00000569603 PLEKHG2Q9H7P9 1386 aa8.48□□□□□ -1.05
LINC00556-201ENST00000569603 ARHGEF15O94989 841 aa8.47□□□□□ -1.05
LINC00556-201ENST00000569603 AMIGO3Q86WK7 504 aa8.47□□□□□ -1.05
LINC00556-201ENST00000569603 CYLDQ9NQC7 956 aa8.47□□□□□ -1.05
LINC00556-201ENST00000569603 POLKQ9UBT6 870 aa8.47□□□□□ -1.05
LINC00556-201ENST00000569603 PCDH11XQ9BZA7 1347 aa8.47□□□□□ -1.05
LINC00556-201ENST00000569603 PCDH11YQ9BZA8 1340 aa8.47□□□□□ -1.05
LINC00556-201ENST00000569603 C4BP0C0L5 1744 aa8.46□□□□□ -1.05
LINC00556-201ENST00000569603 GDF11O95390 407 aa8.46□□□□□ -1.06
LINC00556-201ENST00000569603 COL23A1Q86Y22 540 aaPredicted RBP8.46□□□□□ -1.06
LINC00556-201ENST00000569603 PCNTO95613 3336 aa8.46□□□□□ -1.06
LINC00556-201ENST00000569603 GAS6Q14393 721 aa8.45□□□□□ -1.06
LINC00556-201ENST00000569603 PNMA1Q8ND90 353 aa8.45□□□□□ -1.06
LINC00556-201ENST00000569603 RAPGEF4Q8WZA2 1011 aa8.45□□□□□ -1.06
LINC00556-201ENST00000569603 CCNL1Q9UK58 526 aaPredicted RBP8.45□□□□□ -1.06
LINC00556-201ENST00000569603 ZNF831Q5JPB2 1677 aa8.45□□□□□ -1.06
LINC00556-201ENST00000569603 PALLDQ8WX93 1383 aa8.45□□□□□ -1.06
LINC00556-201ENST00000569603 RHOQP17081 205 aa8.44□□□□□ -1.06
LINC00556-201ENST00000569603 TATP17735 454 aaPredicted RBP8.44□□□□□ -1.06
LINC00556-201ENST00000569603 LYSMD3Q7Z3D4 306 aa8.44□□□□□ -1.06
LINC00556-201ENST00000569603 PIGBQ92521 554 aa8.44□□□□□ -1.06
LINC00556-201ENST00000569603 SYTL4Q96C24 671 aaPredicted RBP8.44□□□□□ -1.06
LINC00556-201ENST00000569603 TFCP2L1Q9NZI6 479 aa8.44□□□□□ -1.06
LINC00556-201ENST00000569603 MYH14Q7Z406 1995 aaKnown RBP8.43□□□□□ -1.06
LINC00556-201ENST00000569603 PRICKLE2Q7Z3G6 844 aa8.43□□□□□ -1.06
LINC00556-201ENST00000569603 NLGN2Q8NFZ4 835 aa8.43□□□□□ -1.06
LINC00556-201ENST00000569603 IGSF1Q8N6C5 1336 aa8.43□□□□□ -1.06
LINC00556-201ENST00000569603 KDRP35968 1356 aa8.43□□□□□ -1.06
LINC00556-201ENST00000569603 COL5A3P25940 1745 aaPredicted RBP8.43□□□□□ -1.06
LINC00556-201ENST00000569603 GIGYF1O75420 1035 aaPredicted RBP8.42□□□□□ -1.06
LINC00556-201ENST00000569603 IRS1P35568 1242 aa8.42□□□□□ -1.06
LINC00556-201ENST00000569603 PDE4CQ08493 712 aa8.42□□□□□ -1.06
LINC00556-201ENST00000569603 EIF4A2Q14240 407 aaKnown RBP8.42□□□□□ -1.06
LINC00556-201ENST00000569603 TAF7LQ5H9L4 462 aa8.42□□□□□ -1.06
LINC00556-201ENST00000569603 LYPD4Q6UWN0 246 aa8.42□□□□□ -1.06
LINC00556-201ENST00000569603 CICQ96RK0 1608 aaPredicted RBP8.42□□□□□ -1.06
LINC00556-201ENST00000569603 KIAA1551Q9HCM1 1747 aa8.42□□□□□ -1.06
LINC00556-201ENST00000569603 KIF13BQ9NQT8 1826 aa8.42□□□□□ -1.06
LINC00556-201ENST00000569603 KDM6AO15550 1401 aaPredicted RBP8.41□□□□□ -1.06
LINC00556-201ENST00000569603 HSPA5P11021 654 aaKnown RBP8.41□□□□□ -1.06
LINC00556-201ENST00000569603 PHKG2P15735 406 aa8.41□□□□□ -1.06
LINC00556-201ENST00000569603 YBX3P16989 372 aaKnown RBP eCLIP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms