RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 LMBRD1Q9NUN5 540 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 TLR7Q9NYK1 1049 aaKnown RBP6.83□□□□□ -1.32
CDH13-213ENST00000569454 CEP126Q9P2H0 1117 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 KIF3AQ9Y496 699 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 NRAPQ86VF7 1730 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 ITGB4P16144 1822 aa6.83□□□□□ -1.32
CDH13-213ENST00000569454 SPATA31A6Q5VVP1 1343 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 ZNF831Q5JPB2 1677 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 RREB1Q92766 1687 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 A0A0D9SFI3 127 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 TAF5LO75529 589 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 CSF1RP07333 972 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 ZSCAN22P10073 491 aaPredicted RBP6.82□□□□□ -1.32
CDH13-213ENST00000569454 RPS6KB1P23443 525 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 PIP4K2AP48426 406 aaPredicted RBP6.82□□□□□ -1.32
CDH13-213ENST00000569454 PTH1RQ03431 593 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 IFIT5Q13325 482 aaKnown RBP6.82□□□□□ -1.32
CDH13-213ENST00000569454 TAF7LQ5H9L4 462 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 CCDC158Q5M9N0 1113 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 ZSCAN25Q6NSZ9 544 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 ATG9AQ7Z3C6 839 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 DNAJC10Q8IXB1 793 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 RASEFQ8IZ41 740 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 FAM43AQ8N2R8 423 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 KLHDC4Q8TBB5 520 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 NGLY1Q96IV0 654 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 ZNF512BQ96KM6 892 aaPredicted RBP6.82□□□□□ -1.32
CDH13-213ENST00000569454 FAM227BQ96M60 508 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 DBNDD2Q9BQY9 259 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 PAG1Q9NWQ8 432 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 ZDHHC9Q9Y397 364 aa6.82□□□□□ -1.32
CDH13-213ENST00000569454 PHLPP1O60346 1717 aa6.81□□□□□ -1.32
CDH13-213ENST00000569454 DOT1LQ8TEK3 1739 aa6.81□□□□□ -1.32
CDH13-213ENST00000569454 STX6O43752 255 aa6.81□□□□□ -1.32
CDH13-213ENST00000569454 LETM1O95202 739 aaPredicted RBP6.81□□□□□ -1.32
CDH13-213ENST00000569454 IFIT1P09914 478 aaKnown RBP6.81□□□□□ -1.32
CDH13-213ENST00000569454 CYP19A1P11511 503 aaPredicted RBP6.81□□□□□ -1.32
CDH13-213ENST00000569454 RGS19P49795 217 aa6.81□□□□□ -1.32
CDH13-213ENST00000569454 PARP10Q53GL7 1025 aa6.81□□□□□ -1.32
CDH13-213ENST00000569454 GORABQ5T7V8 394 aa6.81□□□□□ -1.32
CDH13-213ENST00000569454 BARGINQ6ZT62 677 aa6.81□□□□□ -1.32
CDH13-213ENST00000569454 SMARCC1Q92922 1105 aaPredicted RBP6.81□□□□□ -1.32
CDH13-213ENST00000569454 DNAJC2Q99543 621 aaKnown RBP6.81□□□□□ -1.32
CDH13-213ENST00000569454 CTNNA3Q9UI47 895 aa6.81□□□□□ -1.32
CDH13-213ENST00000569454 ASAP1Q9ULH1 1129 aa6.81□□□□□ -1.32
CDH13-213ENST00000569454 RTL9Q8NET4 1388 aa6.81□□□□□ -1.32
CDH13-213ENST00000569454 PKD1L2Q7Z442 2459 aa6.81□□□□□ -1.32
CDH13-213ENST00000569454 SPATA31A1Q5TZJ5 1347 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 A0A1B0GUL7 405 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 ANKRD18BA2A2Z9 1011 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 PDE8AO60658 829 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 PRPF40AO75400 957 aaKnown RBP6.8□□□□□ -1.32
CDH13-213ENST00000569454 ATRNO75882 1429 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 F13A1P00488 732 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 XRCC6P12956 609 aaKnown RBP eCLIP6.8□□□□□ -1.32
CDH13-213ENST00000569454 CTSWP56202 376 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 IRX5P78411 483 aaPredicted RBP6.8□□□□□ -1.32
CDH13-213ENST00000569454 CCDC173Q0VFZ6 552 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 PKP1Q13835 747 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 TTF1Q15361 905 aaPredicted RBP6.8□□□□□ -1.32
CDH13-213ENST00000569454 DDB1Q16531 1140 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 RIC1Q4ADV7 1423 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 TTC39AQ5SRH9 613 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 ZMYM1Q5SVZ6 1142 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 CAVIN1Q6NZI2 390 aaKnown RBP6.8□□□□□ -1.32
CDH13-213ENST00000569454 NOL8Q76FK4 1167 aaKnown RBP6.8□□□□□ -1.32
CDH13-213ENST00000569454 NLRP10Q86W26 655 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 FAM184AQ8NB25 1140 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 UBE2Q2Q8WVN8 375 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 NEUROD6Q96NK8 337 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 LLPHQ9BRT6 129 aaKnown RBP6.8□□□□□ -1.32
CDH13-213ENST00000569454 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.8□□□□□ -1.32
CDH13-213ENST00000569454 BRPF3Q9ULD4 1205 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 SLIT2O94813 1529 aa6.8□□□□□ -1.32
CDH13-213ENST00000569454 GOLIM4O00461 696 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 RNF113AO15541 343 aaKnown RBP6.79□□□□□ -1.32
CDH13-213ENST00000569454 UQCRFS1P1P0C7P4 283 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 SYT1P21579 422 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 GJB2P29033 226 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 NASPP49321 788 aaPredicted RBP6.79□□□□□ -1.32
CDH13-213ENST00000569454 UBE2HP62256 183 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 HMGN5P82970 282 aaKnown RBP6.79□□□□□ -1.32
CDH13-213ENST00000569454 SF3B2Q13435 895 aaKnown RBP6.79□□□□□ -1.32
CDH13-213ENST00000569454 ATP2B3Q16720 1220 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 ADCK5Q3MIX3 580 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 ZSCAN23Q3MJ62 389 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 DDX46Q7L014 1031 aaKnown RBP6.79□□□□□ -1.32
CDH13-213ENST00000569454 ZNF589Q86UQ0 364 aaPredicted RBP6.79□□□□□ -1.32
CDH13-213ENST00000569454 DZIP3Q86Y13 1208 aaKnown RBP6.79□□□□□ -1.32
CDH13-213ENST00000569454 PROM2Q8N271 834 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 FBXL16Q8N461 479 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 RGS22Q8NE09 1264 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 TRIM44Q96DX7 344 aaPredicted RBP6.79□□□□□ -1.32
CDH13-213ENST00000569454 NEK1Q96PY6 1258 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 CCDC87Q9NVE4 849 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 ZNF652Q9Y2D9 606 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 ZNF330Q9Y3S2 320 aaPredicted RBP6.79□□□□□ -1.32
CDH13-213ENST00000569454 PCDHB13Q9Y5F0 798 aa6.79□□□□□ -1.32
CDH13-213ENST00000569454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.79□□□□□ -1.32
CDH13-213ENST00000569454 MYH3P11055 1940 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms