RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 GPRC5DQ9NZD1 345 aa12.27□□□□□ -0.45
CLN6-209ENST00000569336 PSMD14O00487 310 aa12.26□□□□□ -0.45
CLN6-209ENST00000569336 GMPSP49915 693 aaPredicted RBP12.26□□□□□ -0.45
CLN6-209ENST00000569336 USP50Q70EL3 339 aaPredicted RBP12.26□□□□□ -0.45
CLN6-209ENST00000569336 ZNF804AQ7Z570 1209 aa12.26□□□□□ -0.45
CLN6-209ENST00000569336 DZIP1LQ8IYY4 767 aaKnown RBP12.26□□□□□ -0.45
CLN6-209ENST00000569336 MEIS3Q99687 375 aa12.26□□□□□ -0.45
CLN6-209ENST00000569336 ADARB2Q9NS39 739 aaKnown RBP12.26□□□□□ -0.45
CLN6-209ENST00000569336 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
CLN6-209ENST00000569336 LRRFIP2Q9Y608 721 aaKnown RBP12.26□□□□□ -0.45
CLN6-209ENST00000569336 MYO3BQ8WXR4 1341 aa12.26□□□□□ -0.45
CLN6-209ENST00000569336 MYO5AQ9Y4I1 1855 aaKnown RBP12.25□□□□□ -0.45
CLN6-209ENST00000569336 MYH7P12883 1935 aa12.25□□□□□ -0.45
CLN6-209ENST00000569336 H7C1D1 291 aa12.25□□□□□ -0.45
CLN6-209ENST00000569336 C15orf52Q6ZUT6 534 aaKnown RBP12.25□□□□□ -0.45
CLN6-209ENST00000569336 DPF2Q92785 391 aa12.25□□□□□ -0.45
CLN6-209ENST00000569336 MAST2Q6P0Q8 1798 aa12.25□□□□□ -0.45
CLN6-209ENST00000569336 USP17L3A6NCW0 530 aa12.24□□□□□ -0.45
CLN6-209ENST00000569336 USP17L4A6NCW7 530 aa12.24□□□□□ -0.45
CLN6-209ENST00000569336 TAF5LO75529 589 aa12.24□□□□□ -0.45
CLN6-209ENST00000569336 GNAI2P04899 355 aa12.24□□□□□ -0.45
CLN6-209ENST00000569336 VIL1P09327 827 aaKnown RBP12.24□□□□□ -0.45
CLN6-209ENST00000569336 UBE4AQ14139 1066 aa12.24□□□□□ -0.45
CLN6-209ENST00000569336 METTL24Q5JXM2 366 aa12.24□□□□□ -0.45
CLN6-209ENST00000569336 USP17L1Q7RTZ2 530 aa12.24□□□□□ -0.45
CLN6-209ENST00000569336 ITPRIPQ8IWB1 547 aa12.24□□□□□ -0.45
CLN6-209ENST00000569336 TMEM57Q8N5G2 664 aa12.24□□□□□ -0.45
CLN6-209ENST00000569336 AGBL3Q8NEM8 1001 aa12.24□□□□□ -0.45
CLN6-209ENST00000569336 HELBQ8NG08 1087 aaPredicted RBP12.24□□□□□ -0.45
CLN6-209ENST00000569336 RCAN3Q9UKA8 241 aa12.24□□□□□ -0.45
CLN6-209ENST00000569336 CLEC11AQ9Y240 323 aa12.24□□□□□ -0.45
CLN6-209ENST00000569336 AKAP11Q9UKA4 1901 aa12.23□□□□□ -0.45
CLN6-209ENST00000569336 PLIN1O60240 522 aa12.23□□□□□ -0.45
CLN6-209ENST00000569336 EPS15P42566 896 aa12.23□□□□□ -0.45
CLN6-209ENST00000569336 MTX1Q13505 466 aa12.23□□□□□ -0.45
CLN6-209ENST00000569336 RSBN1LQ6PCB5 846 aaPredicted RBP12.23□□□□□ -0.45
CLN6-209ENST00000569336 MICALL2Q8IY33 904 aa12.23□□□□□ -0.45
CLN6-209ENST00000569336 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.23□□□□□ -0.45
CLN6-209ENST00000569336 CNOT7Q9UIV1 285 aaKnown RBP12.23□□□□□ -0.45
CLN6-209ENST00000569336 RIPOR2Q9Y4F9 1068 aa12.23□□□□□ -0.45
CLN6-209ENST00000569336 IRS2Q9Y4H2 1338 aa12.22□□□□□ -0.45
CLN6-209ENST00000569336 EYA2O00167 538 aa12.22□□□□□ -0.45
CLN6-209ENST00000569336 CIAO1O76071 339 aa12.22□□□□□ -0.45
CLN6-209ENST00000569336 PDE8BO95263 885 aa12.22□□□□□ -0.45
CLN6-209ENST00000569336 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
CLN6-209ENST00000569336 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
CLN6-209ENST00000569336 MMP14P50281 582 aa12.22□□□□□ -0.45
CLN6-209ENST00000569336 PUM3Q15397 648 aaKnown RBP12.22□□□□□ -0.45
CLN6-209ENST00000569336 STRIP1Q5VSL9 837 aa12.22□□□□□ -0.45
CLN6-209ENST00000569336 FBXW7Q969H0 707 aa12.22□□□□□ -0.45
CLN6-209ENST00000569336 PUS3Q9BZE2 481 aaKnown RBP12.22□□□□□ -0.45
CLN6-209ENST00000569336 TNNQ9UQP3 1299 aa12.22□□□□□ -0.45
CLN6-209ENST00000569336 CDK5RAP2Q96SN8 1893 aa12.22□□□□□ -0.45
CLN6-209ENST00000569336 LAMB1P07942 1786 aa12.21□□□□□ -0.45
CLN6-209ENST00000569336 SRGAP3O43295 1099 aa12.21□□□□□ -0.45
CLN6-209ENST00000569336 KLRK1P26718 216 aa12.21□□□□□ -0.45
CLN6-209ENST00000569336 RFX5P48382 616 aaPredicted RBP12.21□□□□□ -0.45
CLN6-209ENST00000569336 PTPN12Q05209 780 aaKnown RBP12.21□□□□□ -0.45
CLN6-209ENST00000569336 LRRC24Q50LG9 513 aa12.21□□□□□ -0.45
CLN6-209ENST00000569336 TXNRD3Q86VQ6 643 aa12.21□□□□□ -0.45
CLN6-209ENST00000569336 VGLL2Q8N8G2 317 aa12.21□□□□□ -0.45
CLN6-209ENST00000569336 KLHDC4Q8TBB5 520 aa12.21□□□□□ -0.45
CLN6-209ENST00000569336 ZC3H15Q8WU90 426 aaKnown RBP12.21□□□□□ -0.45
CLN6-209ENST00000569336 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
CLN6-209ENST00000569336 DOCK2Q92608 1830 aa12.21□□□□□ -0.46
CLN6-209ENST00000569336 THSD7BQ9C0I4 1608 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 WTIPA6NIX2 430 aaPredicted RBP12.2□□□□□ -0.46
CLN6-209ENST00000569336 IFIT1P09914 478 aaKnown RBP12.2□□□□□ -0.46
CLN6-209ENST00000569336 USP17L8P0C7I0 530 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 IL1R1P14778 569 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 IL15P40933 162 aaPredicted RBP12.2□□□□□ -0.46
CLN6-209ENST00000569336 CAVIN4Q5BKX8 364 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 DACT2Q5SW24 774 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 TTLL5Q6EMB2 1281 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 VPS37DQ86XT2 251 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 OGFOD1Q8N543 542 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 SIL1Q9H173 461 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 CHMP4BQ9H444 224 aaKnown RBP12.2□□□□□ -0.46
CLN6-209ENST00000569336 CD209Q9NNX6 404 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 COPRSQ9NQ92 184 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 KCNQ5Q9NR82 932 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 FOCADQ5VW36 1801 aa12.2□□□□□ -0.46
CLN6-209ENST00000569336 PASKQ96RG2 1323 aa12.19□□□□□ -0.46
CLN6-209ENST00000569336 RLBP1P12271 317 aa12.19□□□□□ -0.46
CLN6-209ENST00000569336 SLC5A1P13866 664 aa12.19□□□□□ -0.46
CLN6-209ENST00000569336 HIBADHP31937 336 aaKnown RBP12.19□□□□□ -0.46
CLN6-209ENST00000569336 KIF4BQ2VIQ3 1234 aa12.19□□□□□ -0.46
CLN6-209ENST00000569336 MAP1SQ66K74 1059 aaPredicted RBP12.19□□□□□ -0.46
CLN6-209ENST00000569336 YTHDC1Q96MU7 727 aaKnown RBP12.19□□□□□ -0.46
CLN6-209ENST00000569336 CEP126Q9P2H0 1117 aa12.19□□□□□ -0.46
CLN6-209ENST00000569336 HDAC9Q9UKV0 1011 aa12.19□□□□□ -0.46
CLN6-209ENST00000569336 DDX19BQ9UMR2 479 aa12.19□□□□□ -0.46
CLN6-209ENST00000569336 PAPPA2Q9BXP8 1791 aa12.19□□□□□ -0.46
CLN6-209ENST00000569336 OTOFQ9HC10 1997 aa12.19□□□□□ -0.46
CLN6-209ENST00000569336 SNAP23O00161 211 aa12.18□□□□□ -0.46
CLN6-209ENST00000569336 ZNF280AP59817 542 aaPredicted RBP12.18□□□□□ -0.46
CLN6-209ENST00000569336 FKBP1AP62942 108 aaKnown RBP12.18□□□□□ -0.46
CLN6-209ENST00000569336 GTF2IP78347 998 aa12.18□□□□□ -0.46
CLN6-209ENST00000569336 TBC1D10BQ4KMP7 808 aaPredicted RBP12.18□□□□□ -0.46
CLN6-209ENST00000569336 ATG9AQ7Z3C6 839 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms