RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 SCARF1Q14162 830 aa8.16□□□□□ -1.1
HERC2-211ENST00000569335 DCTN1Q14203 1278 aa8.16□□□□□ -1.1
HERC2-211ENST00000569335 TAF7Q15545 349 aaPredicted RBP8.16□□□□□ -1.1
HERC2-211ENST00000569335 ZNF784Q8NCA9 323 aaPredicted RBP8.16□□□□□ -1.1
HERC2-211ENST00000569335 ZNF592Q92610 1267 aa8.16□□□□□ -1.1
HERC2-211ENST00000569335 TBC1D32Q96NH3 1257 aa8.16□□□□□ -1.1
HERC2-211ENST00000569335 DCTPP1Q9H773 170 aa8.16□□□□□ -1.1
HERC2-211ENST00000569335 ATP10DQ9P241 1426 aa8.16□□□□□ -1.1
HERC2-211ENST00000569335 FAM208AQ9UK61 1670 aaKnown RBP8.16□□□□□ -1.1
HERC2-211ENST00000569335 KDM3BQ7LBC6 1761 aa8.15□□□□□ -1.1
HERC2-211ENST00000569335 HEG1Q9ULI3 1381 aa8.15□□□□□ -1.1
HERC2-211ENST00000569335 GCP02774 474 aa8.15□□□□□ -1.1
HERC2-211ENST00000569335 CCT4P50991 539 aaKnown RBP8.15□□□□□ -1.1
HERC2-211ENST00000569335 ESCO1Q5FWF5 840 aa8.15□□□□□ -1.1
HERC2-211ENST00000569335 BMP2KLQ5H9B9 411 aa8.15□□□□□ -1.1
HERC2-211ENST00000569335 C6orf118Q5T5N4 469 aa8.15□□□□□ -1.1
HERC2-211ENST00000569335 LCE2AQ5TA79 106 aaPredicted RBP8.15□□□□□ -1.1
HERC2-211ENST00000569335 CHD1LQ86WJ1 897 aa8.15□□□□□ -1.1
HERC2-211ENST00000569335 SIRT2Q8IXJ6 389 aa8.15□□□□□ -1.1
HERC2-211ENST00000569335 ANKRD44Q8N8A2 993 aa8.15□□□□□ -1.1
HERC2-211ENST00000569335 IL17REQ8NFR9 667 aa8.15□□□□□ -1.1
HERC2-211ENST00000569335 CEP126Q9P2H0 1117 aa8.15□□□□□ -1.1
HERC2-211ENST00000569335 TSPYL4Q9UJ04 414 aa8.15□□□□□ -1.1
HERC2-211ENST00000569335 RAD21O60216 631 aa8.14□□□□□ -1.11
HERC2-211ENST00000569335 LILRA1O75019 489 aa8.14□□□□□ -1.11
HERC2-211ENST00000569335 WASHC4Q2M389 1173 aa8.14□□□□□ -1.11
HERC2-211ENST00000569335 AKAP4Q5JQC9 854 aa8.14□□□□□ -1.11
HERC2-211ENST00000569335 CCDC30Q5VVM6 783 aa8.14□□□□□ -1.11
HERC2-211ENST00000569335 Q6ZVU0 165 aa8.14□□□□□ -1.11
HERC2-211ENST00000569335 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
HERC2-211ENST00000569335 CPDO75976 1380 aa8.13□□□□□ -1.11
HERC2-211ENST00000569335 STRCP1A6NGW2 1772 aa8.13□□□□□ -1.11
HERC2-211ENST00000569335 COL18A1P39060 1754 aa8.13□□□□□ -1.11
HERC2-211ENST00000569335 CRYBG1Q9Y4K1 1723 aa8.13□□□□□ -1.11
HERC2-211ENST00000569335 FOXO3O43524 673 aa8.13□□□□□ -1.11
HERC2-211ENST00000569335 UPP2O95045 317 aa8.13□□□□□ -1.11
HERC2-211ENST00000569335 BMP2P12643 396 aa8.13□□□□□ -1.11
HERC2-211ENST00000569335 ADD1P35611 737 aaKnown RBP8.13□□□□□ -1.11
HERC2-211ENST00000569335 PLEKHO1Q53GL0 409 aaPredicted RBP8.13□□□□□ -1.11
HERC2-211ENST00000569335 RNF20Q5VTR2 975 aa8.13□□□□□ -1.11
HERC2-211ENST00000569335 NBPF6Q5VWK0 638 aa8.13□□□□□ -1.11
HERC2-211ENST00000569335 PROSER2Q86WR7 435 aaPredicted RBP8.13□□□□□ -1.11
HERC2-211ENST00000569335 NBPF4Q96M43 638 aa8.13□□□□□ -1.11
HERC2-211ENST00000569335 TSEN34Q9BSV6 310 aaKnown RBP8.13□□□□□ -1.11
HERC2-211ENST00000569335 UPF2Q9HAU5 1272 aaKnown RBP8.13□□□□□ -1.11
HERC2-211ENST00000569335 CYLDQ9NQC7 956 aa8.13□□□□□ -1.11
HERC2-211ENST00000569335 TMEM94Q12767 1356 aa8.12□□□□□ -1.11
HERC2-211ENST00000569335 CEP85Q6P2H3 762 aa8.12□□□□□ -1.11
HERC2-211ENST00000569335 TREML4Q6UXN2 200 aa8.12□□□□□ -1.11
HERC2-211ENST00000569335 KRT28Q7Z3Y7 464 aa8.12□□□□□ -1.11
HERC2-211ENST00000569335 AGBL1Q96MI9 1066 aa8.12□□□□□ -1.11
HERC2-211ENST00000569335 ORAI2Q96SN7 254 aa8.12□□□□□ -1.11
HERC2-211ENST00000569335 SIPA1L3O60292 1781 aaPredicted RBP8.12□□□□□ -1.11
HERC2-211ENST00000569335 PXDNQ92626 1479 aa8.12□□□□□ -1.11
HERC2-211ENST00000569335 TNS3Q68CZ2 1445 aa8.12□□□□□ -1.11
HERC2-211ENST00000569335 NPHP3Q7Z494 1330 aa8.11□□□□□ -1.11
HERC2-211ENST00000569335 ELL2O00472 640 aaPredicted RBP8.11□□□□□ -1.11
HERC2-211ENST00000569335 RBM25P49756 843 aaKnown RBP8.11□□□□□ -1.11
HERC2-211ENST00000569335 EIF4A1P60842 406 aaKnown RBP8.11□□□□□ -1.11
HERC2-211ENST00000569335 STK31Q9BXU1 1019 aa8.11□□□□□ -1.11
HERC2-211ENST00000569335 OSBPL3Q9H4L5 887 aa8.11□□□□□ -1.11
HERC2-211ENST00000569335 PCDHB11Q9Y5F2 797 aa8.11□□□□□ -1.11
HERC2-211ENST00000569335 MRC1P22897 1456 aa8.11□□□□□ -1.11
HERC2-211ENST00000569335 HMMRO75330 724 aa8.1□□□□□ -1.11
HERC2-211ENST00000569335 GNAI3P08754 354 aa8.1□□□□□ -1.11
HERC2-211ENST00000569335 RELBQ01201 579 aa8.1□□□□□ -1.11
HERC2-211ENST00000569335 NFX1Q12986 1120 aaKnown RBP8.1□□□□□ -1.11
HERC2-211ENST00000569335 BECN1Q14457 450 aa8.1□□□□□ -1.11
HERC2-211ENST00000569335 KRT24Q2M2I5 525 aa8.1□□□□□ -1.11
HERC2-211ENST00000569335 NPM2Q86SE8 214 aaKnown RBP8.1□□□□□ -1.11
HERC2-211ENST00000569335 CCDC125Q86Z20 511 aa8.1□□□□□ -1.11
HERC2-211ENST00000569335 RNMTO43148 476 aaKnown RBP8.09□□□□□ -1.11
HERC2-211ENST00000569335 ADH1AP07327 375 aa8.09□□□□□ -1.11
HERC2-211ENST00000569335 ATF3P18847 181 aa8.09□□□□□ -1.11
HERC2-211ENST00000569335 SEMA3FQ13275 785 aa8.09□□□□□ -1.11
HERC2-211ENST00000569335 TSGA10IPQ3SY00 556 aa8.09□□□□□ -1.11
HERC2-211ENST00000569335 NUTM2GQ5VZR2 741 aa8.09□□□□□ -1.11
HERC2-211ENST00000569335 PHTF2Q8N3S3 785 aa8.09□□□□□ -1.11
HERC2-211ENST00000569335 KDF1Q8NAX2 398 aaPredicted RBP8.09□□□□□ -1.11
HERC2-211ENST00000569335 ANKRD24Q8TF21 1146 aa8.09□□□□□ -1.11
HERC2-211ENST00000569335 SNX21Q969T3 373 aa8.09□□□□□ -1.11
HERC2-211ENST00000569335 CCDC85AQ96PX6 553 aaPredicted RBP8.09□□□□□ -1.11
HERC2-211ENST00000569335 RGPD2P0DJD1 1756 aa8.09□□□□□ -1.11
HERC2-211ENST00000569335 PKD1L3Q7Z443 1732 aa8.09□□□□□ -1.11
HERC2-211ENST00000569335 PARP4Q9UKK3 1724 aaKnown RBP8.09□□□□□ -1.11
HERC2-211ENST00000569335 XIRP1Q702N8 1843 aaKnown RBP8.08□□□□□ -1.12
HERC2-211ENST00000569335 SPATA31A3Q5VYP0 1347 aa8.08□□□□□ -1.12
HERC2-211ENST00000569335 STRCQ7RTU9 1775 aa8.08□□□□□ -1.12
HERC2-211ENST00000569335 SOBPA7XYQ1 873 aa8.08□□□□□ -1.12
HERC2-211ENST00000569335 SCTRP47872 440 aa8.08□□□□□ -1.12
HERC2-211ENST00000569335 ERVK-9P63128 1117 aa8.08□□□□□ -1.12
HERC2-211ENST00000569335 ANKRD45Q5TZF3 282 aa8.08□□□□□ -1.12
HERC2-211ENST00000569335 C14orf37Q86TY3 774 aa8.08□□□□□ -1.12
HERC2-211ENST00000569335 PLEKHM2Q8IWE5 1019 aa8.08□□□□□ -1.12
HERC2-211ENST00000569335 CDCA7Q9BWT1 371 aaPredicted RBP8.08□□□□□ -1.12
HERC2-211ENST00000569335 LNPKQ9C0E8 428 aa8.08□□□□□ -1.12
HERC2-211ENST00000569335 ZNF395Q9H8N7 513 aaPredicted RBP8.08□□□□□ -1.12
HERC2-211ENST00000569335 AOX1Q06278 1338 aa8.07□□□□□ -1.12
HERC2-211ENST00000569335 SOS2Q07890 1332 aaPredicted RBP8.07□□□□□ -1.12
HERC2-211ENST00000569335 SALL3Q9BXA9 1300 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms