RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 RHPN1Q8TCX5 695 aa20.67■□□□□ 0.9
COMMD4-224ENST00000568877 KIF1BPQ96EK5 621 aa20.67■□□□□ 0.9
COMMD4-224ENST00000568877 IRS2Q9Y4H2 1338 aa20.67■□□□□ 0.9
COMMD4-224ENST00000568877 SLC5A1P13866 664 aa20.66■□□□□ 0.9
COMMD4-224ENST00000568877 JDP2Q8WYK2 163 aa20.66■□□□□ 0.9
COMMD4-224ENST00000568877 GPR108Q9NPR9 543 aa20.66■□□□□ 0.9
COMMD4-224ENST00000568877 A0A1B0GUL7 405 aa20.65■□□□□ 0.9
COMMD4-224ENST00000568877 IGHDP01880 384 aa20.65■□□□□ 0.9
COMMD4-224ENST00000568877 TIMM10P62072 90 aa20.65■□□□□ 0.9
COMMD4-224ENST00000568877 DOK7Q18PE1 504 aa20.65■□□□□ 0.9
COMMD4-224ENST00000568877 NIM1KQ8IY84 436 aa20.65■□□□□ 0.9
COMMD4-224ENST00000568877 G3V3G9 751 aa20.64■□□□□ 0.89
COMMD4-224ENST00000568877 DCAF8Q5TAQ9 597 aa20.64■□□□□ 0.89
COMMD4-224ENST00000568877 GCC1Q96CN9 775 aa20.64■□□□□ 0.89
COMMD4-224ENST00000568877 DBNDD1Q9H9R9 158 aa20.64■□□□□ 0.89
COMMD4-224ENST00000568877 SBF1O95248 1867 aa20.64■□□□□ 0.89
COMMD4-224ENST00000568877 COL4A5P29400 1685 aa20.64■□□□□ 0.89
COMMD4-224ENST00000568877 GYG1P46976 350 aa20.63■□□□□ 0.89
COMMD4-224ENST00000568877 TNNI3KQ59H18 835 aa20.63■□□□□ 0.89
COMMD4-224ENST00000568877 CAVIN4Q5BKX8 364 aa20.63■□□□□ 0.89
COMMD4-224ENST00000568877 FAM84BQ96KN1 310 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-224ENST00000568877 NEUROD6Q96NK8 337 aa20.63■□□□□ 0.89
COMMD4-224ENST00000568877 LRRCC1Q9C099 1032 aa20.63■□□□□ 0.89
COMMD4-224ENST00000568877 COA1Q9GZY4 146 aa20.63■□□□□ 0.89
COMMD4-224ENST00000568877 IL1RAPL2Q9NP60 686 aa20.63■□□□□ 0.89
COMMD4-224ENST00000568877 ZNRF3Q9ULT6 936 aa20.63■□□□□ 0.89
COMMD4-224ENST00000568877 FPGT-TNNI3KV9GXZ4 949 aa20.63■□□□□ 0.89
COMMD4-224ENST00000568877 ZNF609O15014 1411 aa20.62■□□□□ 0.89
COMMD4-224ENST00000568877 ECE2O60344 883 aa20.62■□□□□ 0.89
COMMD4-224ENST00000568877 HIBADHP31937 336 aaKnown RBP20.62■□□□□ 0.89
COMMD4-224ENST00000568877 ZNF804AQ7Z570 1209 aa20.62■□□□□ 0.89
COMMD4-224ENST00000568877 FBXO33Q7Z6M2 555 aa20.62■□□□□ 0.89
COMMD4-224ENST00000568877 FZD9O00144 591 aa20.61■□□□□ 0.89
COMMD4-224ENST00000568877 ADORA1P30542 326 aa20.61■□□□□ 0.89
COMMD4-224ENST00000568877 ERICH6BQ5W0A0 696 aa20.61■□□□□ 0.89
COMMD4-224ENST00000568877 PODNQ7Z5L7 613 aa20.61■□□□□ 0.89
COMMD4-224ENST00000568877 VPS37DQ86XT2 251 aa20.61■□□□□ 0.89
COMMD4-224ENST00000568877 CLASRPQ8N2M8 674 aaKnown RBP20.61■□□□□ 0.89
COMMD4-224ENST00000568877 EAF2Q96CJ1 260 aaPredicted RBP20.61■□□□□ 0.89
COMMD4-224ENST00000568877 XAGE2Q96GT9 111 aa20.61■□□□□ 0.89
COMMD4-224ENST00000568877 CD209Q9NNX6 404 aa20.61■□□□□ 0.89
COMMD4-224ENST00000568877 ZC3H4Q9UPT8 1303 aaKnown RBP20.6■□□□□ 0.89
COMMD4-224ENST00000568877 YDJCA8MPS7 323 aa20.6■□□□□ 0.89
COMMD4-224ENST00000568877 SMARCA5O60264 1052 aaPredicted RBP20.6■□□□□ 0.89
COMMD4-224ENST00000568877 BCAMP50895 628 aa20.6■□□□□ 0.89
COMMD4-224ENST00000568877 SMC5Q8IY18 1101 aa20.6■□□□□ 0.89
COMMD4-224ENST00000568877 CCDC88AQ3V6T2 1871 aa20.6■□□□□ 0.89
COMMD4-224ENST00000568877 IL1R1P14778 569 aa20.59■□□□□ 0.89
COMMD4-224ENST00000568877 AACSQ86V21 672 aa20.59■□□□□ 0.89
COMMD4-224ENST00000568877 CCDC8Q9H0W5 538 aaPredicted RBP20.59■□□□□ 0.89
COMMD4-224ENST00000568877 DICER1Q9UPY3 1922 aaKnown RBP20.59■□□□□ 0.89
COMMD4-224ENST00000568877 EIF6P56537 245 aaKnown RBP20.58■□□□□ 0.89
COMMD4-224ENST00000568877 GORABQ5T7V8 394 aa20.58■□□□□ 0.89
COMMD4-224ENST00000568877 DBNDD2Q9BQY9 259 aa20.58■□□□□ 0.89
COMMD4-224ENST00000568877 BCL11AQ9H165 835 aa20.58■□□□□ 0.89
COMMD4-224ENST00000568877 CXCL9Q07325 125 aa20.57■□□□□ 0.88
COMMD4-224ENST00000568877 ANKRD45Q5TZF3 282 aa20.57■□□□□ 0.88
COMMD4-224ENST00000568877 CCDC102BQ68D86 513 aa20.57■□□□□ 0.88
COMMD4-224ENST00000568877 TDRD7Q8NHU6 1098 aaKnown RBP20.57■□□□□ 0.88
COMMD4-224ENST00000568877 KCNQ5Q9NR82 932 aa20.57■□□□□ 0.88
COMMD4-224ENST00000568877 DBNLQ9UJU6 430 aaKnown RBP20.57■□□□□ 0.88
COMMD4-224ENST00000568877 ZNF541Q9H0D2 1346 aa20.56■□□□□ 0.88
COMMD4-224ENST00000568877 RAD17O75943 681 aa20.56■□□□□ 0.88
COMMD4-224ENST00000568877 IFIT2P09913 472 aaKnown RBP20.56■□□□□ 0.88
COMMD4-224ENST00000568877 PHKA1P46020 1223 aa20.56■□□□□ 0.88
COMMD4-224ENST00000568877 GNL3LQ9NVN8 582 aaKnown RBP20.56■□□□□ 0.88
COMMD4-224ENST00000568877 TLR7Q9NYK1 1049 aaKnown RBP20.56■□□□□ 0.88
COMMD4-224ENST00000568877 ZBTB47Q9UFB7 747 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-224ENST00000568877 TIAM2Q8IVF5 1701 aa20.56■□□□□ 0.88
COMMD4-224ENST00000568877 ARAP2Q8WZ64 1704 aa20.56■□□□□ 0.88
COMMD4-224ENST00000568877 CIAPIN1Q6FI81 312 aa20.55■□□□□ 0.88
COMMD4-224ENST00000568877 B4GALNT3Q6L9W6 998 aa20.55■□□□□ 0.88
COMMD4-224ENST00000568877 IQSEC3Q9UPP2 1182 aaPredicted RBP20.55■□□□□ 0.88
COMMD4-224ENST00000568877 USP17L3A6NCW0 530 aa20.54■□□□□ 0.88
COMMD4-224ENST00000568877 USP17L4A6NCW7 530 aa20.54■□□□□ 0.88
COMMD4-224ENST00000568877 FRAT2O75474 233 aaPredicted RBP20.54■□□□□ 0.88
COMMD4-224ENST00000568877 TNIP1Q15025 636 aa20.54■□□□□ 0.88
COMMD4-224ENST00000568877 CCDC158Q5M9N0 1113 aa20.54■□□□□ 0.88
COMMD4-224ENST00000568877 DPY19L2Q6NUT2 758 aa20.54■□□□□ 0.88
COMMD4-224ENST00000568877 USP17L1Q7RTZ2 530 aa20.54■□□□□ 0.88
COMMD4-224ENST00000568877 CCDC136Q96JN2 1154 aa20.54■□□□□ 0.88
COMMD4-224ENST00000568877 CHD4Q14839 1912 aa20.54■□□□□ 0.88
COMMD4-224ENST00000568877 PSMD14O00487 310 aa20.53■□□□□ 0.88
COMMD4-224ENST00000568877 ZBTB22O15209 634 aa20.53■□□□□ 0.88
COMMD4-224ENST00000568877 GTF2IP78347 998 aa20.53■□□□□ 0.88
COMMD4-224ENST00000568877 STRIP1Q5VSL9 837 aa20.53■□□□□ 0.88
COMMD4-224ENST00000568877 TTLL5Q6EMB2 1281 aa20.53■□□□□ 0.88
COMMD4-224ENST00000568877 GPC2Q8N158 579 aa20.53■□□□□ 0.88
COMMD4-224ENST00000568877 GJA3Q9Y6H8 435 aa20.53■□□□□ 0.88
COMMD4-224ENST00000568877 GLTPD2A6NH11 291 aa20.52■□□□□ 0.88
COMMD4-224ENST00000568877 SEMA3EO15041 775 aa20.52■□□□□ 0.88
COMMD4-224ENST00000568877 VIL1P09327 827 aaKnown RBP20.52■□□□□ 0.88
COMMD4-224ENST00000568877 UQCRFS1P1P0C7P4 283 aa20.52■□□□□ 0.88
COMMD4-224ENST00000568877 NUCB1Q02818 461 aa20.52■□□□□ 0.88
COMMD4-224ENST00000568877 TTC39AQ5SRH9 613 aa20.52■□□□□ 0.88
COMMD4-224ENST00000568877 FBXW7Q969H0 707 aa20.52■□□□□ 0.88
COMMD4-224ENST00000568877 PPP4R2Q9NY27 417 aa20.52■□□□□ 0.88
COMMD4-224ENST00000568877 FAM205AQ6ZU69 1335 aa20.52■□□□□ 0.87
COMMD4-224ENST00000568877 DDNO94850 711 aaPredicted RBP20.51■□□□□ 0.87
COMMD4-224ENST00000568877 ARID4AP29374 1257 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms