RNA–Protein interactions for RNA: ENST00000568692.1

TSC2-224, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 636 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-224ENST00000568692 CA12O43570 354 aa12.82□□□□□ -0.36
TSC2-224ENST00000568692 CSF1RP07333 972 aa12.82□□□□□ -0.36
TSC2-224ENST00000568692 CCT4P50991 539 aaKnown RBP12.82□□□□□ -0.36
TSC2-224ENST00000568692 NOGQ13253 232 aa12.82□□□□□ -0.36
TSC2-224ENST00000568692 FKBP5Q13451 457 aaPredicted RBP12.82□□□□□ -0.36
TSC2-224ENST00000568692 USP17L1Q7RTZ2 530 aa12.82□□□□□ -0.36
TSC2-224ENST00000568692 DNAAF4Q8WXU2 420 aa12.82□□□□□ -0.36
TSC2-224ENST00000568692 ZIC5Q96T25 663 aa12.82□□□□□ -0.36
TSC2-224ENST00000568692 FAM155AB1AL88 458 aaPredicted RBP12.81□□□□□ -0.36
TSC2-224ENST00000568692 USP17L8P0C7I0 530 aa12.81□□□□□ -0.36
TSC2-224ENST00000568692 SCARF1Q14162 830 aa12.81□□□□□ -0.36
TSC2-224ENST00000568692 RGMBQ6NW40 437 aa12.81□□□□□ -0.36
TSC2-224ENST00000568692 PPP4R3CPQ6ZMV5 832 aa12.81□□□□□ -0.36
TSC2-224ENST00000568692 SULF1Q8IWU6 871 aa12.81□□□□□ -0.36
TSC2-224ENST00000568692 C2orf69Q8N8R5 385 aa12.81□□□□□ -0.36
TSC2-224ENST00000568692 LINS1Q8NG48 757 aa12.81□□□□□ -0.36
TSC2-224ENST00000568692 MYOZ2Q9NPC6 264 aa12.81□□□□□ -0.36
TSC2-224ENST00000568692 TSKSQ9UJT2 592 aa12.81□□□□□ -0.36
TSC2-224ENST00000568692 ITGA6P23229 1130 aa12.8□□□□□ -0.36
TSC2-224ENST00000568692 IGHMBP2P38935 993 aaKnown RBP12.8□□□□□ -0.36
TSC2-224ENST00000568692 EXOSC9Q06265 439 aaKnown RBP12.8□□□□□ -0.36
TSC2-224ENST00000568692 FAM161AQ3B820 660 aa12.8□□□□□ -0.36
TSC2-224ENST00000568692 DACT2Q5SW24 774 aa12.8□□□□□ -0.36
TSC2-224ENST00000568692 ANGEL2Q5VTE6 544 aaKnown RBP12.8□□□□□ -0.36
TSC2-224ENST00000568692 TXNRD3Q86VQ6 643 aa12.8□□□□□ -0.36
TSC2-224ENST00000568692 CDCA5Q96FF9 252 aa12.8□□□□□ -0.36
TSC2-224ENST00000568692 ABHD8Q96I13 439 aa12.8□□□□□ -0.36
TSC2-224ENST00000568692 COA1Q9GZY4 146 aa12.8□□□□□ -0.36
TSC2-224ENST00000568692 MYH16Q9H6N6 1097 aa12.8□□□□□ -0.36
TSC2-224ENST00000568692 SPINK5Q9NQ38 1064 aaPredicted RBP12.8□□□□□ -0.36
TSC2-224ENST00000568692 LEMD3Q9Y2U8 911 aa12.8□□□□□ -0.36
TSC2-224ENST00000568692 SALL2Q9Y467 1007 aaPredicted RBP12.8□□□□□ -0.36
TSC2-224ENST00000568692 CACNA1FO60840 1977 aa12.8□□□□□ -0.36
TSC2-224ENST00000568692 SPEF2Q9C093 1822 aa12.79□□□□□ -0.36
TSC2-224ENST00000568692 CCDC102AQ96A19 550 aa12.79□□□□□ -0.36
TSC2-224ENST00000568692 PITPNM2Q9BZ72 1349 aa12.79□□□□□ -0.36
TSC2-224ENST00000568692 ZNF157P51786 506 aaPredicted RBP12.78□□□□□ -0.36
TSC2-224ENST00000568692 BEND3Q5T5X7 828 aa12.78□□□□□ -0.36
TSC2-224ENST00000568692 STRIP1Q5VSL9 837 aa12.78□□□□□ -0.36
TSC2-224ENST00000568692 MPHOSPH8Q99549 860 aa12.78□□□□□ -0.36
TSC2-224ENST00000568692 MXD3Q9BW11 206 aa12.78□□□□□ -0.36
TSC2-224ENST00000568692 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
TSC2-224ENST00000568692 ZNF804BA4D1E1 1349 aa12.78□□□□□ -0.36
TSC2-224ENST00000568692 ZNF646O15015 1829 aaPredicted RBP12.78□□□□□ -0.36
TSC2-224ENST00000568692 SLC10A3P09131 477 aa12.77□□□□□ -0.37
TSC2-224ENST00000568692 KLRK1P26718 216 aa12.77□□□□□ -0.37
TSC2-224ENST00000568692 FOXO4P98177 505 aa12.77□□□□□ -0.37
TSC2-224ENST00000568692 NBPF9Q3BBW0 867 aa12.77□□□□□ -0.37
TSC2-224ENST00000568692 MYO3BQ8WXR4 1341 aa12.77□□□□□ -0.37
TSC2-224ENST00000568692 ANKRD18BA2A2Z9 1011 aa12.76□□□□□ -0.37
TSC2-224ENST00000568692 F6X3S4 739 aa12.76□□□□□ -0.37
TSC2-224ENST00000568692 MMP14P50281 582 aa12.76□□□□□ -0.37
TSC2-224ENST00000568692 FKBP1BP68106 108 aa12.76□□□□□ -0.37
TSC2-224ENST00000568692 KIF23Q02241 960 aaPredicted RBP12.76□□□□□ -0.37
TSC2-224ENST00000568692 CHRNDQ07001 517 aa12.76□□□□□ -0.37
TSC2-224ENST00000568692 OGFOD1Q8N543 542 aa12.76□□□□□ -0.37
TSC2-224ENST00000568692 SCAF8Q9UPN6 1271 aaKnown RBP12.76□□□□□ -0.37
TSC2-224ENST00000568692 IRS2Q9Y4H2 1338 aa12.76□□□□□ -0.37
TSC2-224ENST00000568692 WNT10BO00744 389 aa12.75□□□□□ -0.37
TSC2-224ENST00000568692 TTLL5Q6EMB2 1281 aa12.75□□□□□ -0.37
TSC2-224ENST00000568692 C15orf52Q6ZUT6 534 aaKnown RBP12.75□□□□□ -0.37
TSC2-224ENST00000568692 FBXW7Q969H0 707 aa12.75□□□□□ -0.37
TSC2-224ENST00000568692 SAGE1Q9NXZ1 904 aa12.75□□□□□ -0.37
TSC2-224ENST00000568692 CASP8AP2Q9UKL3 1982 aa12.74□□□□□ -0.37
TSC2-224ENST00000568692 PAPPA2Q9BXP8 1791 aa12.74□□□□□ -0.37
TSC2-224ENST00000568692 SNAP23O00161 211 aa12.74□□□□□ -0.37
TSC2-224ENST00000568692 IFIT5Q13325 482 aaKnown RBP12.74□□□□□ -0.37
TSC2-224ENST00000568692 RASAL3Q86YV0 1011 aa12.74□□□□□ -0.37
TSC2-224ENST00000568692 FAM9BQ8IZU0 186 aa12.74□□□□□ -0.37
TSC2-224ENST00000568692 CSRNP1Q96S65 589 aa12.74□□□□□ -0.37
TSC2-224ENST00000568692 MCOLN1Q9GZU1 580 aa12.74□□□□□ -0.37
TSC2-224ENST00000568692 CD209Q9NNX6 404 aa12.74□□□□□ -0.37
TSC2-224ENST00000568692 GRM8O00222 908 aa12.73□□□□□ -0.37
TSC2-224ENST00000568692 TAF5LO75529 589 aa12.73□□□□□ -0.37
TSC2-224ENST00000568692 KCNJ4P48050 445 aa12.73□□□□□ -0.37
TSC2-224ENST00000568692 GTF2IP78347 998 aa12.73□□□□□ -0.37
TSC2-224ENST00000568692 EPHA10Q5JZY3 1008 aa12.73□□□□□ -0.37
TSC2-224ENST00000568692 PRAMEF18Q5VWM3 479 aa12.73□□□□□ -0.37
TSC2-224ENST00000568692 LMBR1LQ6UX01 489 aa12.73□□□□□ -0.37
TSC2-224ENST00000568692 MOB2Q70IA6 237 aa12.73□□□□□ -0.37
TSC2-224ENST00000568692 ZBED3Q96IU2 234 aaPredicted RBP12.73□□□□□ -0.37
TSC2-224ENST00000568692 RNF186Q9NXI6 227 aa12.73□□□□□ -0.37
TSC2-224ENST00000568692 ZNF521Q96K83 1311 aa12.72□□□□□ -0.37
TSC2-224ENST00000568692 TNRC18O15417 2968 aaPredicted RBP12.72□□□□□ -0.37
TSC2-224ENST00000568692 SASH1O94885 1247 aa12.72□□□□□ -0.37
TSC2-224ENST00000568692 KIAA0825Q8IV33 1275 aa12.72□□□□□ -0.37
TSC2-224ENST00000568692 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
TSC2-224ENST00000568692 HELBQ8NG08 1087 aaPredicted RBP12.72□□□□□ -0.37
TSC2-224ENST00000568692 HDAC9Q9UKV0 1011 aa12.72□□□□□ -0.37
TSC2-224ENST00000568692 CHMP3Q9Y3E7 222 aa12.72□□□□□ -0.37
TSC2-224ENST00000568692 CCDC85CA6NKD9 419 aa12.71□□□□□ -0.37
TSC2-224ENST00000568692 UBE2Q2LH0YL09 131 aa12.71□□□□□ -0.37
TSC2-224ENST00000568692 TRPA1O75762 1119 aa12.71□□□□□ -0.37
TSC2-224ENST00000568692 ALDH1L1O75891 902 aa12.71□□□□□ -0.37
TSC2-224ENST00000568692 IL1R1P14778 569 aa12.71□□□□□ -0.37
TSC2-224ENST00000568692 DGKZQ13574 1117 aa12.71□□□□□ -0.37
TSC2-224ENST00000568692 CCDC57Q2TAC2 916 aa12.71□□□□□ -0.37
TSC2-224ENST00000568692 CERS5Q8N5B7 392 aa12.71□□□□□ -0.37
TSC2-224ENST00000568692 ZNF594Q96JF6 807 aaPredicted RBP12.71□□□□□ -0.37
TSC2-224ENST00000568692 A0A1B0GUL6 1792 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms