RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 ALBP02768 609 aa7.79□□□□□ -1.16
CAPN3-217ENST00000567817 TARSP26639 723 aaKnown RBP7.79□□□□□ -1.16
CAPN3-217ENST00000567817 ARID4AP29374 1257 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-217ENST00000567817 DHX32Q7L7V1 743 aaKnown RBP7.79□□□□□ -1.16
CAPN3-217ENST00000567817 CCER1Q8TC90 406 aaPredicted RBP7.79□□□□□ -1.16
CAPN3-217ENST00000567817 STARD13Q9Y3M8 1113 aa7.79□□□□□ -1.16
CAPN3-217ENST00000567817 CNTLNQ9NXG0 1405 aa7.78□□□□□ -1.16
CAPN3-217ENST00000567817 PLEKHD1A6NEE1 506 aa7.78□□□□□ -1.16
CAPN3-217ENST00000567817 M0R082 166 aa7.78□□□□□ -1.16
CAPN3-217ENST00000567817 ZBTB39O15060 712 aa7.78□□□□□ -1.16
CAPN3-217ENST00000567817 GPLD1P80108 840 aa7.78□□□□□ -1.16
CAPN3-217ENST00000567817 MLECQ14165 292 aa7.78□□□□□ -1.16
CAPN3-217ENST00000567817 TRIP4Q15650 581 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-217ENST00000567817 ZNF417Q8TAU3 575 aa7.78□□□□□ -1.16
CAPN3-217ENST00000567817 TRPM4Q8TD43 1214 aa7.78□□□□□ -1.16
CAPN3-217ENST00000567817 ZNF587Q96SQ5 575 aaPredicted RBP7.78□□□□□ -1.16
CAPN3-217ENST00000567817 IGFLR1Q9H665 355 aa7.78□□□□□ -1.16
CAPN3-217ENST00000567817 FNDC3AQ9Y2H6 1198 aaKnown RBP7.78□□□□□ -1.16
CAPN3-217ENST00000567817 NPATQ14207 1427 aa7.78□□□□□ -1.16
CAPN3-217ENST00000567817 PLA2R1Q13018 1463 aa7.77□□□□□ -1.17
CAPN3-217ENST00000567817 NRLP54845 237 aa7.77□□□□□ -1.17
CAPN3-217ENST00000567817 C20orf204Q6ZNR8 217 aa7.77□□□□□ -1.17
CAPN3-217ENST00000567817 NLRP13Q86W25 1043 aa7.77□□□□□ -1.17
CAPN3-217ENST00000567817 MICALL1Q8N3F8 863 aa7.77□□□□□ -1.17
CAPN3-217ENST00000567817 GPR152Q8TDT2 470 aa7.77□□□□□ -1.17
CAPN3-217ENST00000567817 DCAF5Q96JK2 942 aa7.77□□□□□ -1.17
CAPN3-217ENST00000567817 TLR7Q9NYK1 1049 aaKnown RBP7.77□□□□□ -1.17
CAPN3-217ENST00000567817 AGLP35573 1532 aa7.77□□□□□ -1.17
CAPN3-217ENST00000567817 ZNF518AQ6AHZ1 1483 aa7.76□□□□□ -1.17
CAPN3-217ENST00000567817 HOXD8P13378 290 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-217ENST00000567817 NPR3P17342 541 aa7.76□□□□□ -1.17
CAPN3-217ENST00000567817 SOX18P35713 384 aa7.76□□□□□ -1.17
CAPN3-217ENST00000567817 SF3B2Q13435 895 aaKnown RBP7.76□□□□□ -1.17
CAPN3-217ENST00000567817 NOM1Q5C9Z4 860 aaKnown RBP7.76□□□□□ -1.17
CAPN3-217ENST00000567817 ALKBH2Q6NS38 261 aa7.76□□□□□ -1.17
CAPN3-217ENST00000567817 TRIM11Q96F44 468 aa7.76□□□□□ -1.17
CAPN3-217ENST00000567817 SUV39H2Q9H5I1 410 aa7.76□□□□□ -1.17
CAPN3-217ENST00000567817 NAGPAQ9UK23 515 aa7.76□□□□□ -1.17
CAPN3-217ENST00000567817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.76□□□□□ -1.17
CAPN3-217ENST00000567817 SCAPERQ9BY12 1400 aa7.76□□□□□ -1.17
CAPN3-217ENST00000567817 NUP153P49790 1475 aaKnown RBP7.75□□□□□ -1.17
CAPN3-217ENST00000567817 SPDYE3A6NKU9 549 aa7.75□□□□□ -1.17
CAPN3-217ENST00000567817 TOM1O60784 492 aa7.75□□□□□ -1.17
CAPN3-217ENST00000567817 LILRB5O75023 590 aa7.75□□□□□ -1.17
CAPN3-217ENST00000567817 RPLP1P05386 114 aaKnown RBP7.75□□□□□ -1.17
CAPN3-217ENST00000567817 MPSTP25325 297 aa7.75□□□□□ -1.17
CAPN3-217ENST00000567817 COL8A1P27658 744 aa7.75□□□□□ -1.17
CAPN3-217ENST00000567817 FRRS1LQ9P0K9 344 aa7.75□□□□□ -1.17
CAPN3-217ENST00000567817 EGFL7Q9UHF1 273 aa7.75□□□□□ -1.17
CAPN3-217ENST00000567817 SAMD9Q5K651 1589 aa7.75□□□□□ -1.17
CAPN3-217ENST00000567817 C3P01024 1663 aa7.74□□□□□ -1.17
CAPN3-217ENST00000567817 MMP20O60882 483 aa7.74□□□□□ -1.17
CAPN3-217ENST00000567817 FAM13AO94988 1023 aa7.74□□□□□ -1.17
CAPN3-217ENST00000567817 PSAPP07602 524 aa7.74□□□□□ -1.17
CAPN3-217ENST00000567817 EIF1AXP47813 144 aaKnown RBP7.74□□□□□ -1.17
CAPN3-217ENST00000567817 CEBPAP49715 358 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-217ENST00000567817 PLAURQ03405 335 aa7.74□□□□□ -1.17
CAPN3-217ENST00000567817 PSAPL1Q6NUJ1 521 aa7.74□□□□□ -1.17
CAPN3-217ENST00000567817 FAM35AQ86V20 835 aa7.74□□□□□ -1.17
CAPN3-217ENST00000567817 ATCAYQ86WG3 371 aa7.74□□□□□ -1.17
CAPN3-217ENST00000567817 NUDT16Q96DE0 195 aaKnown RBP7.74□□□□□ -1.17
CAPN3-217ENST00000567817 JPH1Q9HDC5 661 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-217ENST00000567817 PLCH2O75038 1416 aa7.74□□□□□ -1.17
CAPN3-217ENST00000567817 KDM5CP41229 1560 aa7.74□□□□□ -1.17
CAPN3-217ENST00000567817 CAMSAP1Q5T5Y3 1602 aa7.74□□□□□ -1.17
CAPN3-217ENST00000567817 CPS1P31327 1500 aa7.73□□□□□ -1.17
CAPN3-217ENST00000567817 ZBTB42B2RXF5 422 aa7.73□□□□□ -1.17
CAPN3-217ENST00000567817 ABL1P00519 1130 aa7.73□□□□□ -1.17
CAPN3-217ENST00000567817 NID1P14543 1247 aa7.73□□□□□ -1.17
CAPN3-217ENST00000567817 CPB1P15086 417 aa7.73□□□□□ -1.17
CAPN3-217ENST00000567817 PCSK2P16519 638 aa7.73□□□□□ -1.17
CAPN3-217ENST00000567817 FKBP4Q02790 459 aaKnown RBP eCLIP7.73□□□□□ -1.17
CAPN3-217ENST00000567817 MTMR3Q13615 1198 aa7.73□□□□□ -1.17
CAPN3-217ENST00000567817 COL9A3Q14050 684 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-217ENST00000567817 PDE12Q6L8Q7 609 aaKnown RBP7.73□□□□□ -1.17
CAPN3-217ENST00000567817 PLVAPQ9BX97 442 aa7.73□□□□□ -1.17
CAPN3-217ENST00000567817 PTPRKQ15262 1439 aa7.72□□□□□ -1.17
CAPN3-217ENST00000567817 RGS9O75916 674 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-217ENST00000567817 MZF1P28698 734 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-217ENST00000567817 ZNF211Q13398 564 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-217ENST00000567817 C8orf86Q6ZUL3 223 aa7.72□□□□□ -1.17
CAPN3-217ENST00000567817 KCTD17Q8N5Z5 321 aa7.72□□□□□ -1.17
CAPN3-217ENST00000567817 NUDT8Q8WV74 236 aa7.72□□□□□ -1.17
CAPN3-217ENST00000567817 EDEM1Q92611 657 aa7.72□□□□□ -1.17
CAPN3-217ENST00000567817 LPIN3Q9BQK8 851 aa7.72□□□□□ -1.17
CAPN3-217ENST00000567817 TCOF1Q13428 1488 aaKnown RBP7.72□□□□□ -1.17
CAPN3-217ENST00000567817 MROH2AA6NES4 1674 aa7.72□□□□□ -1.17
CAPN3-217ENST00000567817 ZNF335Q9H4Z2 1342 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-217ENST00000567817 CLSPNQ9HAW4 1339 aa7.72□□□□□ -1.17
CAPN3-217ENST00000567817 ZNF142P52746 1687 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-217ENST00000567817 PDGFAP04085 211 aa7.71□□□□□ -1.18
CAPN3-217ENST00000567817 HSPA1LP34931 641 aa7.71□□□□□ -1.18
CAPN3-217ENST00000567817 MLLT1Q03111 559 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-217ENST00000567817 DNM1Q05193 864 aaKnown RBP7.71□□□□□ -1.18
CAPN3-217ENST00000567817 PERM1Q5SV97 790 aa7.71□□□□□ -1.18
CAPN3-217ENST00000567817 EFCAB2Q5VUJ9 269 aa7.71□□□□□ -1.18
CAPN3-217ENST00000567817 ELMSAN1Q6PJG2 1045 aa7.71□□□□□ -1.18
CAPN3-217ENST00000567817 OR13H1Q8NG92 308 aa7.71□□□□□ -1.18
CAPN3-217ENST00000567817 TTC9Q92623 222 aa7.71□□□□□ -1.18
CAPN3-217ENST00000567817 ABI2Q9NYB9 513 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms