RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 RNF112Q9ULX5 631 aa6.89□□□□□ -1.31
CDH1-211ENST00000567320 A6NHS1 94 aa6.88□□□□□ -1.31
CDH1-211ENST00000567320 DHX15O43143 795 aaKnown RBP6.88□□□□□ -1.31
CDH1-211ENST00000567320 SSTR4P31391 388 aa6.88□□□□□ -1.31
CDH1-211ENST00000567320 CEP120Q8N960 986 aa6.88□□□□□ -1.31
CDH1-211ENST00000567320 C1orf127Q8N9H9 656 aa6.88□□□□□ -1.31
CDH1-211ENST00000567320 KLHL23Q8NBE8 558 aa6.88□□□□□ -1.31
CDH1-211ENST00000567320 GTF3C2Q8WUA4 911 aaPredicted RBP6.88□□□□□ -1.31
CDH1-211ENST00000567320 SLC7A3Q8WY07 619 aa6.88□□□□□ -1.31
CDH1-211ENST00000567320 UTP4Q969X6 686 aaKnown RBP6.88□□□□□ -1.31
CDH1-211ENST00000567320 POP1Q99575 1024 aaKnown RBP6.88□□□□□ -1.31
CDH1-211ENST00000567320 SEC31BQ9NQW1 1179 aa6.88□□□□□ -1.31
CDH1-211ENST00000567320 KCNK4Q9NYG8 393 aa6.88□□□□□ -1.31
CDH1-211ENST00000567320 RAXQ9Y2V3 346 aa6.88□□□□□ -1.31
CDH1-211ENST00000567320 DDX3YO15523 660 aaKnown RBP6.87□□□□□ -1.31
CDH1-211ENST00000567320 SART1O43290 800 aaKnown RBP6.87□□□□□ -1.31
CDH1-211ENST00000567320 MPSTP25325 297 aa6.87□□□□□ -1.31
CDH1-211ENST00000567320 EIF1AXP47813 144 aaKnown RBP6.87□□□□□ -1.31
CDH1-211ENST00000567320 MTMR3Q13615 1198 aa6.87□□□□□ -1.31
CDH1-211ENST00000567320 UBL7Q96S82 380 aaPredicted RBP6.87□□□□□ -1.31
CDH1-211ENST00000567320 PDGFAP04085 211 aa6.86□□□□□ -1.31
CDH1-211ENST00000567320 ACPPP15309 386 aa6.86□□□□□ -1.31
CDH1-211ENST00000567320 ADAMTSL4Q6UY14 1074 aa6.86□□□□□ -1.31
CDH1-211ENST00000567320 CCDC82Q8N4S0 544 aa6.86□□□□□ -1.31
CDH1-211ENST00000567320 KLHDC7BQ96G42 594 aa6.86□□□□□ -1.31
CDH1-211ENST00000567320 GGNBP2Q9H3C7 697 aa6.86□□□□□ -1.31
CDH1-211ENST00000567320 GTF3C3Q9Y5Q9 886 aa6.86□□□□□ -1.31
CDH1-211ENST00000567320 H3BRJ5 948 aa6.85□□□□□ -1.31
CDH1-211ENST00000567320 PDE2AO00408 941 aaPredicted RBP6.85□□□□□ -1.31
CDH1-211ENST00000567320 GSC2O15499 205 aa6.85□□□□□ -1.31
CDH1-211ENST00000567320 TRPA1O75762 1119 aa6.85□□□□□ -1.31
CDH1-211ENST00000567320 MZF1P28698 734 aaPredicted RBP6.85□□□□□ -1.31
CDH1-211ENST00000567320 ARL4DP49703 201 aa6.85□□□□□ -1.31
CDH1-211ENST00000567320 NLRP12P59046 1061 aa6.85□□□□□ -1.31
CDH1-211ENST00000567320 ALKBH2Q6NS38 261 aa6.85□□□□□ -1.31
CDH1-211ENST00000567320 Q6ZS46 218 aa6.85□□□□□ -1.31
CDH1-211ENST00000567320 SLC51AQ86UW1 340 aa6.85□□□□□ -1.31
CDH1-211ENST00000567320 UBASH3BQ8TF42 649 aa6.85□□□□□ -1.31
CDH1-211ENST00000567320 PMEPA1Q969W9 287 aa6.85□□□□□ -1.31
CDH1-211ENST00000567320 POLIQ9UNA4 740 aa6.85□□□□□ -1.31
CDH1-211ENST00000567320 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.85□□□□□ -1.31
CDH1-211ENST00000567320 IGLV1-40P01703 118 aa6.84□□□□□ -1.31
CDH1-211ENST00000567320 PIP4K2BP78356 416 aa6.84□□□□□ -1.31
CDH1-211ENST00000567320 KIAA1211Q6ZU35 1233 aa6.84□□□□□ -1.31
CDH1-211ENST00000567320 ADAM19Q9H013 955 aa6.84□□□□□ -1.31
CDH1-211ENST00000567320 KCNF1Q9H3M0 494 aa6.84□□□□□ -1.31
CDH1-211ENST00000567320 SALL4Q9UJQ4 1053 aa6.84□□□□□ -1.31
CDH1-211ENST00000567320 MTMR7Q9Y216 660 aa6.84□□□□□ -1.31
CDH1-211ENST00000567320 PHACTR2O75167 634 aa6.83□□□□□ -1.32
CDH1-211ENST00000567320 ABL1P00519 1130 aa6.83□□□□□ -1.32
CDH1-211ENST00000567320 XKR5Q6UX68 686 aa6.83□□□□□ -1.32
CDH1-211ENST00000567320 FOXD4L4Q8WXT5 416 aaPredicted RBP6.83□□□□□ -1.32
CDH1-211ENST00000567320 HHIPQ96QV1 700 aa6.83□□□□□ -1.32
CDH1-211ENST00000567320 OSMRQ99650 979 aa6.83□□□□□ -1.32
CDH1-211ENST00000567320 DZANK1Q9NVP4 752 aa6.83□□□□□ -1.32
CDH1-211ENST00000567320 ADAM11O75078 769 aa6.82□□□□□ -1.32
CDH1-211ENST00000567320 SSFA2P28290 1259 aa6.82□□□□□ -1.32
CDH1-211ENST00000567320 UVSSAQ2YD98 709 aa6.82□□□□□ -1.32
CDH1-211ENST00000567320 FDX2Q6P4F2 183 aa6.82□□□□□ -1.32
CDH1-211ENST00000567320 TRIM42Q8IWZ5 723 aa6.82□□□□□ -1.32
CDH1-211ENST00000567320 ARMC10Q8N2F6 343 aa6.82□□□□□ -1.32
CDH1-211ENST00000567320 ASAP3Q8TDY4 903 aa6.82□□□□□ -1.32
CDH1-211ENST00000567320 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
CDH1-211ENST00000567320 PPP1R15AO75807 674 aaPredicted RBP6.81□□□□□ -1.32
CDH1-211ENST00000567320 FAM13AO94988 1023 aa6.81□□□□□ -1.32
CDH1-211ENST00000567320 WNT8BQ93098 351 aa6.81□□□□□ -1.32
CDH1-211ENST00000567320 RUSC1Q9BVN2 902 aa6.81□□□□□ -1.32
CDH1-211ENST00000567320 RNF208Q9H0X6 261 aa6.81□□□□□ -1.32
CDH1-211ENST00000567320 C7orf69Q9H7B7 122 aa6.81□□□□□ -1.32
CDH1-211ENST00000567320 OSGEPQ9NPF4 335 aa6.81□□□□□ -1.32
CDH1-211ENST00000567320 ANO2Q9NQ90 1003 aa6.81□□□□□ -1.32
CDH1-211ENST00000567320 HMX2A2RU54 273 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 CARNS1A5YM72 827 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 TMEM88BA6NKF7 163 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 NFKBIEO00221 500 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 EREGO14944 169 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 GAS2O43903 313 aaKnown RBP6.8□□□□□ -1.32
CDH1-211ENST00000567320 TNFRSF21O75509 655 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 TGFB1P01137 390 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 BMP3P12645 472 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 EDN3P14138 238 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 USP5P45974 858 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 EHHADHQ08426 723 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 C19orf57Q0VDD7 668 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 NFIAQ12857 509 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 IKBKEQ14164 716 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 ANKRD34AQ69YU3 496 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 TMEM102Q8N9M5 508 aaPredicted RBP6.8□□□□□ -1.32
CDH1-211ENST00000567320 FAM46AQ96IP4 442 aaKnown RBP6.8□□□□□ -1.32
CDH1-211ENST00000567320 MYRFLQ96LU7 910 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 ZKSCAN3Q9BRR0 538 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 USP26Q9BXU7 913 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 CHRDQ9H2X0 955 aa6.8□□□□□ -1.32
CDH1-211ENST00000567320 COBLO75128 1261 aa6.79□□□□□ -1.32
CDH1-211ENST00000567320 RXRBP28702 533 aa6.79□□□□□ -1.32
CDH1-211ENST00000567320 NUTM2GQ5VZR2 741 aa6.79□□□□□ -1.32
CDH1-211ENST00000567320 BEND4Q6ZU67 534 aa6.79□□□□□ -1.32
CDH1-211ENST00000567320 SNX29Q8TEQ0 813 aa6.79□□□□□ -1.32
CDH1-211ENST00000567320 BSNDQ8WZ55 320 aa6.79□□□□□ -1.32
CDH1-211ENST00000567320 FOXD3Q9UJU5 478 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms