RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 SMARCA5O60264 1052 aaPredicted RBP4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 IDH1O75874 414 aaKnown RBP4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 LDHCP07864 332 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 IFFO1Q0D2I5 559 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 PPP1R42Q7Z4L9 355 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 HOOK3Q86VS8 718 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 CKAP2LQ8IYA6 745 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 SEPT12Q8IYM1 358 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 DYDC1Q8WWB3 177 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 GJD4Q96KN9 370 aaPredicted RBP4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 USP16Q9Y5T5 823 aa4.98□□□□□ -1.61
LPCAT2-208ENST00000566915 DEPDC5O75140 1603 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 HSF2BPO75031 334 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 CALM1P0DP23 149 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 CALM2P0DP24 149 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 CALM3P0DP25 149 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 TRIM14Q14142 442 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 MCM10Q7L590 875 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 RAI14Q9P0K7 980 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 METP08581 1390 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 ANKRD18BA2A2Z9 1011 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 PER1O15534 1290 aaPredicted RBP4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 CHRNA2Q15822 529 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 CCDC186Q7Z3E2 898 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 CROCCP2Q86T23 111 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 LMBR1Q8WVP7 490 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 IQCDQ96DY2 449 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 TESK2Q96S53 571 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 ZMYND15Q9H091 742 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 CENPHQ9H3R5 247 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 IFIT3O14879 490 aaKnown RBP4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 KRT86O43790 486 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 METAP2P50579 478 aaKnown RBP eCLIP4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 TYRO3Q06418 890 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 MCMDC2Q4G0Z9 681 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 PIBF1Q8WXW3 757 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 C1orf167Q5SNV9 1468 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 MYL6BP14649 208 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 GNAT2P19087 354 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 NF2P35240 595 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 ANO6Q4KMQ2 910 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 SPTY2D1Q68D10 685 aaPredicted RBP4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 TAX1BP1Q86VP1 789 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 TTC14Q96N46 770 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 SELENOOQ9BVL4 669 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 USP26Q9BXU7 913 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 TFCP2L1Q9NZI6 479 aa4.97□□□□□ -1.61
LPCAT2-208ENST00000566915 TACC1O75410 805 aa4.96□□□□□ -1.61
LPCAT2-208ENST00000566915 IL15P40933 162 aaPredicted RBP4.96□□□□□ -1.61
LPCAT2-208ENST00000566915 UBA7P41226 1012 aa4.96□□□□□ -1.61
LPCAT2-208ENST00000566915 MTIF2P46199 727 aaKnown RBP4.96□□□□□ -1.61
LPCAT2-208ENST00000566915 CNGA4Q8IV77 575 aa4.96□□□□□ -1.61
LPCAT2-208ENST00000566915 IBTKQ9P2D0 1353 aaPredicted RBP4.96□□□□□ -1.61
LPCAT2-208ENST00000566915 CTAGE9A4FU28 777 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 N4BP3O15049 544 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 HOXD11P31277 338 aaPredicted RBP4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 HSPA4P34932 840 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 GTF2F1P35269 517 aaKnown RBP eCLIP4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 PRIM1P49642 420 aaKnown RBP4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 PDE4BQ07343 736 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 USP37Q86T82 979 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 CCDC155Q8N6L0 562 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 PARP3Q9Y6F1 533 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 EDC4Q6P2E9 1401 aaKnown RBP4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 BICDL2A1A5D9 508 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 PSMA7O14818 248 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 VAMP4O75379 141 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 CALML3P27482 149 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 RFC4P35249 363 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 C6orf163Q5TEZ5 329 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 MYRIPQ8NFW9 859 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 LINS1Q8NG48 757 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 TSGA10Q9BZW7 698 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 CWC25Q9NXE8 425 aaPredicted RBP4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 DACT1Q9NYF0 836 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 RBM8AQ9Y5S9 174 aaKnown RBP4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 SPHKAPQ2M3C7 1700 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 EBAG9O00559 213 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 STAMBPO95630 424 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 SNRPA1P09661 255 aaKnown RBP4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 LMAN1P49257 510 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 NLRP5P59047 1200 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 PPP2R5BQ15173 497 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 SPECC1Q5M775 1068 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 KSR2Q6VAB6 950 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 MFSD6Q6ZSS7 791 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 CEP128Q6ZU80 1094 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 NME9Q86XW9 330 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 PLEKHM2Q8IWE5 1019 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 IP6K1Q92551 441 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 MYD88Q99836 296 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 TM6SF1Q9BZW5 370 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 TTC12Q9H892 705 aaPredicted RBP4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 TRMT1Q9NXH9 659 aaKnown RBP4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 EMILIN1Q9Y6C2 1016 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 LRRC7Q96NW7 1537 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 RTL1A6NKG5 1358 aa4.96□□□□□ -1.62
LPCAT2-208ENST00000566915 SPTLC2O15270 562 aa4.95□□□□□ -1.62
LPCAT2-208ENST00000566915 ZNF500O60304 480 aaPredicted RBP4.95□□□□□ -1.62
LPCAT2-208ENST00000566915 WDHD1O75717 1129 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms