RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 DCCP43146 1447 aa18.28■□□□□ 0.52
COMMD4-215ENST00000566843 PTPDC1A2A3K4 754 aa18.28■□□□□ 0.52
COMMD4-215ENST00000566843 RNMTO43148 476 aaKnown RBP18.28■□□□□ 0.52
COMMD4-215ENST00000566843 ARMCX5Q6P1M9 558 aa18.28■□□□□ 0.52
COMMD4-215ENST00000566843 STOX1Q6ZVD7 989 aa18.28■□□□□ 0.52
COMMD4-215ENST00000566843 SIL1Q9H173 461 aa18.28■□□□□ 0.52
COMMD4-215ENST00000566843 FHOD1Q9Y613 1164 aa18.28■□□□□ 0.52
COMMD4-215ENST00000566843 A0A1W2PQ27 194 aa18.28■□□□□ 0.52
COMMD4-215ENST00000566843 A0A1W2PQ64 194 aa18.28■□□□□ 0.52
COMMD4-215ENST00000566843 A0A1W2PQD8 194 aa18.28■□□□□ 0.52
COMMD4-215ENST00000566843 DDX58O95786 925 aaKnown RBP18.28■□□□□ 0.52
COMMD4-215ENST00000566843 ZNF530Q6P9A1 599 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-215ENST00000566843 DHX32Q7L7V1 743 aaKnown RBP18.28■□□□□ 0.52
COMMD4-215ENST00000566843 ILDR1Q86SU0 546 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-215ENST00000566843 ERCC6LQ2NKX8 1250 aa18.27■□□□□ 0.52
COMMD4-215ENST00000566843 MCMDC2Q4G0Z9 681 aa18.27■□□□□ 0.52
COMMD4-215ENST00000566843 MRPS27Q92552 414 aaKnown RBP18.27■□□□□ 0.52
COMMD4-215ENST00000566843 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.27■□□□□ 0.52
COMMD4-215ENST00000566843 IGKV5-2P06315 115 aa18.26■□□□□ 0.51
COMMD4-215ENST00000566843 EXOSC10Q01780 885 aaKnown RBP18.26■□□□□ 0.51
COMMD4-215ENST00000566843 PLEKHO1Q53GL0 409 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-215ENST00000566843 ADALQ6DHV7 355 aa18.26■□□□□ 0.51
COMMD4-215ENST00000566843 TIGD1Q96MW7 591 aa18.26■□□□□ 0.51
COMMD4-215ENST00000566843 COPRSQ9NQ92 184 aa18.26■□□□□ 0.51
COMMD4-215ENST00000566843 RTEL1Q9NZ71 1219 aa18.26■□□□□ 0.51
COMMD4-215ENST00000566843 CALCOCO1Q9P1Z2 691 aa18.26■□□□□ 0.51
COMMD4-215ENST00000566843 DBNLQ9UJU6 430 aaKnown RBP18.26■□□□□ 0.51
COMMD4-215ENST00000566843 NFAT5O94916 1531 aa18.26■□□□□ 0.51
COMMD4-215ENST00000566843 MPRIPQ6WCQ1 1025 aa18.26■□□□□ 0.51
COMMD4-215ENST00000566843 XPO4Q9C0E2 1151 aaKnown RBP18.26■□□□□ 0.51
COMMD4-215ENST00000566843 DDX21Q9NR30 783 aaKnown RBP eCLIP18.26■□□□□ 0.51
COMMD4-215ENST00000566843 ST7Q9NRC1 585 aa18.26■□□□□ 0.51
COMMD4-215ENST00000566843 PCDHA7Q9UN72 937 aa18.26■□□□□ 0.51
COMMD4-215ENST00000566843 CYP2C19P33261 490 aa18.25■□□□□ 0.51
COMMD4-215ENST00000566843 ME1P48163 572 aa18.25■□□□□ 0.51
COMMD4-215ENST00000566843 CLCN6P51797 869 aa18.25■□□□□ 0.51
COMMD4-215ENST00000566843 SYT10Q6XYQ8 523 aa18.25■□□□□ 0.51
COMMD4-215ENST00000566843 CCDC129Q6ZRS4 1044 aa18.25■□□□□ 0.51
COMMD4-215ENST00000566843 NOL10Q9BSC4 688 aaKnown RBP18.25■□□□□ 0.51
COMMD4-215ENST00000566843 LRRC2Q9BYS8 371 aa18.25■□□□□ 0.51
COMMD4-215ENST00000566843 KIAA1468Q9P260 1216 aa18.25■□□□□ 0.51
COMMD4-215ENST00000566843 SIPA1L3O60292 1781 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-215ENST00000566843 GTF2E1P29083 439 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-215ENST00000566843 TNNI3KQ59H18 835 aa18.25■□□□□ 0.51
COMMD4-215ENST00000566843 LRRN4CLQ8ND94 238 aa18.25■□□□□ 0.51
COMMD4-215ENST00000566843 KLHDC4Q8TBB5 520 aa18.25■□□□□ 0.51
COMMD4-215ENST00000566843 FPGT-TNNI3KV9GXZ4 949 aa18.25■□□□□ 0.51
COMMD4-215ENST00000566843 RGPD2P0DJD1 1756 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 NEDD4P46934 1319 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 PHLPP2Q6ZVD8 1323 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 SH3TC1Q8TE82 1336 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 AMOTQ4VCS5 1084 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 LMOD2Q6P5Q4 547 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 TMC6Q7Z403 805 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 HAUS7Q99871 368 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 IFNKQ9P0W0 207 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 PHRF1Q9P1Y6 1649 aaKnown RBP18.24■□□□□ 0.51
COMMD4-215ENST00000566843 ZRANB2O95218 330 aaKnown RBP eCLIP18.24■□□□□ 0.51
COMMD4-215ENST00000566843 SFPQP23246 707 aaKnown RBP eCLIP18.24■□□□□ 0.51
COMMD4-215ENST00000566843 RFX5P48382 616 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-215ENST00000566843 APOBRQ0VD83 1088 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 PDIA6Q15084 440 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 KRT28Q7Z3Y7 464 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 CHMP4CQ96CF2 233 aa18.24■□□□□ 0.51
COMMD4-215ENST00000566843 SEC62Q99442 399 aaKnown RBP18.24■□□□□ 0.51
COMMD4-215ENST00000566843 PRAMEF22A3QJZ6 481 aa18.23■□□□□ 0.51
COMMD4-215ENST00000566843 PNMA6AP0CW24 399 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-215ENST00000566843 PLA2G4AP47712 749 aa18.23■□□□□ 0.51
COMMD4-215ENST00000566843 DPCR1Q3MIW9 517 aa18.23■□□□□ 0.51
COMMD4-215ENST00000566843 EPHA10Q5JZY3 1008 aa18.23■□□□□ 0.51
COMMD4-215ENST00000566843 ERCC4Q92889 916 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-215ENST00000566843 ZNF274Q96GC6 653 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-215ENST00000566843 SDF4Q9BRK5 362 aa18.23■□□□□ 0.51
COMMD4-215ENST00000566843 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-215ENST00000566843 NEURL1BA8MQ27 555 aa18.23■□□□□ 0.51
COMMD4-215ENST00000566843 CCP110O43303 1012 aa18.23■□□□□ 0.51
COMMD4-215ENST00000566843 NRDCO43847 1150 aa18.23■□□□□ 0.51
COMMD4-215ENST00000566843 FOSBP53539 338 aa18.23■□□□□ 0.51
COMMD4-215ENST00000566843 NLRP12P59046 1061 aa18.23■□□□□ 0.51
COMMD4-215ENST00000566843 ETF1P62495 437 aaKnown RBP18.23■□□□□ 0.51
COMMD4-215ENST00000566843 NCAPHQ15003 741 aa18.23■□□□□ 0.51
COMMD4-215ENST00000566843 BBXQ8WY36 941 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-215ENST00000566843 PXDNQ92626 1479 aa18.22■□□□□ 0.51
COMMD4-215ENST00000566843 SMC2O95347 1197 aa18.22■□□□□ 0.51
COMMD4-215ENST00000566843 NDUFA8P51970 172 aa18.22■□□□□ 0.51
COMMD4-215ENST00000566843 IRX5P78411 483 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-215ENST00000566843 TICAM2Q86XR7 235 aa18.22■□□□□ 0.51
COMMD4-215ENST00000566843 DSCC1Q9BVC3 393 aa18.22■□□□□ 0.51
COMMD4-215ENST00000566843 TULP2O00295 520 aa18.21■□□□□ 0.51
COMMD4-215ENST00000566843 NPHP1O15259 732 aa18.21■□□□□ 0.51
COMMD4-215ENST00000566843 GCKRQ14397 625 aa18.21■□□□□ 0.51
COMMD4-215ENST00000566843 ARHGAP29Q52LW3 1261 aa18.21■□□□□ 0.51
COMMD4-215ENST00000566843 LINC00301Q8NCQ3 95 aa18.21■□□□□ 0.51
COMMD4-215ENST00000566843 SLAIN2Q9P270 581 aa18.21■□□□□ 0.51
COMMD4-215ENST00000566843 ORC3Q9UBD5 711 aaPredicted RBP18.21■□□□□ 0.51
COMMD4-215ENST00000566843 CARMIL3Q8ND23 1372 aa18.21■□□□□ 0.51
COMMD4-215ENST00000566843 A0A1B0GVL5 298 aa18.21■□□□□ 0.51
COMMD4-215ENST00000566843 CHGBP05060 677 aa18.21■□□□□ 0.51
COMMD4-215ENST00000566843 PDIA3P30101 505 aaKnown RBP18.21■□□□□ 0.51
COMMD4-215ENST00000566843 TPM4P67936 248 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms