RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 SCARF1Q14162 830 aa19.14■□□□□ 0.65
RNF40-209ENST00000566703 DLK2Q6UY11 383 aa19.14■□□□□ 0.65
RNF40-209ENST00000566703 COA1Q9GZY4 146 aa19.14■□□□□ 0.65
RNF40-209ENST00000566703 ZNF316A6NFI3 1004 aaPredicted RBP19.13■□□□□ 0.65
RNF40-209ENST00000566703 ITGA6P23229 1130 aa19.13■□□□□ 0.65
RNF40-209ENST00000566703 MYOZ2Q9NPC6 264 aa19.13■□□□□ 0.65
RNF40-209ENST00000566703 PITPNM2Q9BZ72 1349 aa19.13■□□□□ 0.65
RNF40-209ENST00000566703 SCN9AQ15858 1988 aa19.12■□□□□ 0.65
RNF40-209ENST00000566703 MYO3BQ8WXR4 1341 aa19.12■□□□□ 0.65
RNF40-209ENST00000566703 EXOSC9Q06265 439 aaKnown RBP19.12■□□□□ 0.65
RNF40-209ENST00000566703 STRIP1Q5VSL9 837 aa19.12■□□□□ 0.65
RNF40-209ENST00000566703 ANGEL2Q5VTE6 544 aaKnown RBP19.12■□□□□ 0.65
RNF40-209ENST00000566703 ABHD8Q96I13 439 aa19.12■□□□□ 0.65
RNF40-209ENST00000566703 MPHOSPH8Q99549 860 aa19.12■□□□□ 0.65
RNF40-209ENST00000566703 ASTN2O75129 1339 aaPredicted RBP19.11■□□□□ 0.65
RNF40-209ENST00000566703 WTIPA6NIX2 430 aaPredicted RBP19.11■□□□□ 0.65
RNF40-209ENST00000566703 FAM155AB1AL88 458 aaPredicted RBP19.11■□□□□ 0.65
RNF40-209ENST00000566703 FKBP1BP68106 108 aa19.11■□□□□ 0.65
RNF40-209ENST00000566703 DACT2Q5SW24 774 aa19.11■□□□□ 0.65
RNF40-209ENST00000566703 OGFOD1Q8N543 542 aa19.11■□□□□ 0.65
RNF40-209ENST00000566703 CDCA5Q96FF9 252 aa19.11■□□□□ 0.65
RNF40-209ENST00000566703 ZNF804BA4D1E1 1349 aa19.1■□□□□ 0.65
RNF40-209ENST00000566703 ZNF157P51786 506 aaPredicted RBP19.1■□□□□ 0.65
RNF40-209ENST00000566703 SALL2Q9Y467 1007 aaPredicted RBP19.1■□□□□ 0.65
RNF40-209ENST00000566703 ANKRD18BA2A2Z9 1011 aa19.09■□□□□ 0.65
RNF40-209ENST00000566703 FAM161AQ3B820 660 aa19.09■□□□□ 0.65
RNF40-209ENST00000566703 REM2Q8IYK8 340 aaPredicted RBP19.09■□□□□ 0.65
RNF40-209ENST00000566703 ZIC5Q96T25 663 aa19.09■□□□□ 0.65
RNF40-209ENST00000566703 TSKSQ9UJT2 592 aa19.09■□□□□ 0.65
RNF40-209ENST00000566703 KIF23Q02241 960 aaPredicted RBP19.08■□□□□ 0.64
RNF40-209ENST00000566703 BEND3Q5T5X7 828 aa19.08■□□□□ 0.64
RNF40-209ENST00000566703 TTLL5Q6EMB2 1281 aa19.08■□□□□ 0.64
RNF40-209ENST00000566703 TXNRD3Q86VQ6 643 aa19.08■□□□□ 0.64
RNF40-209ENST00000566703 SAGE1Q9NXZ1 904 aa19.08■□□□□ 0.64
RNF40-209ENST00000566703 POLR2AP24928 1970 aaKnown RBP19.08■□□□□ 0.64
RNF40-209ENST00000566703 C15orf52Q6ZUT6 534 aaKnown RBP19.07■□□□□ 0.64
RNF40-209ENST00000566703 SLC10A3P09131 477 aa19.06■□□□□ 0.64
RNF40-209ENST00000566703 FOXO4P98177 505 aa19.06■□□□□ 0.64
RNF40-209ENST00000566703 CHRNDQ07001 517 aa19.06■□□□□ 0.64
RNF40-209ENST00000566703 IFIT5Q13325 482 aaKnown RBP19.06■□□□□ 0.64
RNF40-209ENST00000566703 HDAC9Q9UKV0 1011 aa19.06■□□□□ 0.64
RNF40-209ENST00000566703 PSME4Q14997 1843 aa19.06■□□□□ 0.64
RNF40-209ENST00000566703 CACNA1FO60840 1977 aa19.06■□□□□ 0.64
RNF40-209ENST00000566703 MYH3P11055 1940 aa19.06■□□□□ 0.64
RNF40-209ENST00000566703 WNT10BO00744 389 aa19.05■□□□□ 0.64
RNF40-209ENST00000566703 KCNJ4P48050 445 aa19.05■□□□□ 0.64
RNF40-209ENST00000566703 NBPF9Q3BBW0 867 aa19.05■□□□□ 0.64
RNF40-209ENST00000566703 SPINK5Q9NQ38 1064 aaPredicted RBP19.05■□□□□ 0.64
RNF40-209ENST00000566703 F6X3S4 739 aa19.04■□□□□ 0.64
RNF40-209ENST00000566703 FBXW7Q969H0 707 aa19.04■□□□□ 0.64
RNF40-209ENST00000566703 CSRNP1Q96S65 589 aa19.04■□□□□ 0.64
RNF40-209ENST00000566703 MXD3Q9BW11 206 aa19.04■□□□□ 0.64
RNF40-209ENST00000566703 CD209Q9NNX6 404 aa19.04■□□□□ 0.64
RNF40-209ENST00000566703 ALDH1L1O75891 902 aa19.03■□□□□ 0.64
RNF40-209ENST00000566703 GTF2IP78347 998 aa19.03■□□□□ 0.64
RNF40-209ENST00000566703 GRM8O00222 908 aa19.02■□□□□ 0.64
RNF40-209ENST00000566703 KLRK1P26718 216 aa19.02■□□□□ 0.64
RNF40-209ENST00000566703 LMBR1LQ6UX01 489 aa19.02■□□□□ 0.64
RNF40-209ENST00000566703 MCOLN1Q9GZU1 580 aa19.02■□□□□ 0.64
RNF40-209ENST00000566703 RNF186Q9NXI6 227 aa19.02■□□□□ 0.64
RNF40-209ENST00000566703 CCDC85CA6NKD9 419 aa19.01■□□□□ 0.63
RNF40-209ENST00000566703 NF2P35240 595 aa19.01■□□□□ 0.63
RNF40-209ENST00000566703 FKBP1AP62942 108 aaKnown RBP19.01■□□□□ 0.63
RNF40-209ENST00000566703 CCDC57Q2TAC2 916 aa19.01■□□□□ 0.63
RNF40-209ENST00000566703 RASAL3Q86YV0 1011 aa19.01■□□□□ 0.63
RNF40-209ENST00000566703 APOBEC3FQ8IUX4 373 aaKnown RBP19.01■□□□□ 0.63
RNF40-209ENST00000566703 FAM9BQ8IZU0 186 aa19.01■□□□□ 0.63
RNF40-209ENST00000566703 ZBED3Q96IU2 234 aaPredicted RBP19.01■□□□□ 0.63
RNF40-209ENST00000566703 C9orf78Q9NZ63 289 aaPredicted RBP19.01■□□□□ 0.63
RNF40-209ENST00000566703 CHMP3Q9Y3E7 222 aa19.01■□□□□ 0.63
RNF40-209ENST00000566703 IRS2Q9Y4H2 1338 aa19■□□□□ 0.63
RNF40-209ENST00000566703 IL1R1P14778 569 aa19■□□□□ 0.63
RNF40-209ENST00000566703 RGS19P49795 217 aa19■□□□□ 0.63
RNF40-209ENST00000566703 KIAA0825Q8IV33 1275 aa19■□□□□ 0.63
RNF40-209ENST00000566703 MTMR14Q8NCE2 650 aa19■□□□□ 0.63
RNF40-209ENST00000566703 UBE2Q2LH0YL09 131 aa18.99■□□□□ 0.63
RNF40-209ENST00000566703 TAF5LO75529 589 aa18.99■□□□□ 0.63
RNF40-209ENST00000566703 TRPA1O75762 1119 aa18.99■□□□□ 0.63
RNF40-209ENST00000566703 DGKZQ13574 1117 aa18.99■□□□□ 0.63
RNF40-209ENST00000566703 EPHA10Q5JZY3 1008 aa18.99■□□□□ 0.63
RNF40-209ENST00000566703 LDHAL6AQ6ZMR3 332 aa18.99■□□□□ 0.63
RNF40-209ENST00000566703 ZNF804AQ7Z570 1209 aa18.99■□□□□ 0.63
RNF40-209ENST00000566703 HELBQ8NG08 1087 aaPredicted RBP18.99■□□□□ 0.63
RNF40-209ENST00000566703 SRCIN1Q9C0H9 1055 aa18.99■□□□□ 0.63
RNF40-209ENST00000566703 PAPPA2Q9BXP8 1791 aa18.98■□□□□ 0.63
RNF40-209ENST00000566703 DLGAP5Q15398 846 aa18.98■□□□□ 0.63
RNF40-209ENST00000566703 TAF7LQ5H9L4 462 aa18.98■□□□□ 0.63
RNF40-209ENST00000566703 PRAMEF18Q5VWM3 479 aa18.98■□□□□ 0.63
RNF40-209ENST00000566703 ZNF521Q96K83 1311 aa18.98■□□□□ 0.63
RNF40-209ENST00000566703 SNAP23O00161 211 aa18.97■□□□□ 0.63
RNF40-209ENST00000566703 SASH1O94885 1247 aa18.97■□□□□ 0.63
RNF40-209ENST00000566703 TTLL12Q14166 644 aaPredicted RBP18.97■□□□□ 0.63
RNF40-209ENST00000566703 ARMC9Q7Z3E5 817 aa18.97■□□□□ 0.63
RNF40-209ENST00000566703 CNNM1Q9NRU3 951 aa18.97■□□□□ 0.63
RNF40-209ENST00000566703 SCAF8Q9UPN6 1271 aaKnown RBP18.97■□□□□ 0.63
RNF40-209ENST00000566703 SLC4A10Q6U841 1118 aa18.96■□□□□ 0.63
RNF40-209ENST00000566703 MOB2Q70IA6 237 aa18.96■□□□□ 0.63
RNF40-209ENST00000566703 CERS5Q8N5B7 392 aa18.96■□□□□ 0.63
RNF40-209ENST00000566703 SPEF2Q9C093 1822 aa18.95■□□□□ 0.62
RNF40-209ENST00000566703 TM4SF4P48230 202 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms