RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 AOC2O75106 756 aa35.25■■■■□ 3.23
UBFD1-206ENST00000566669 CSF1RP07333 972 aa35.25■■■■□ 3.23
UBFD1-206ENST00000566669 GGA3Q9NZ52 723 aa35.25■■■■□ 3.23
UBFD1-206ENST00000566669 ITGA6P23229 1130 aa35.24■■■■□ 3.23
UBFD1-206ENST00000566669 CCDC102AQ96A19 550 aa35.24■■■■□ 3.23
UBFD1-206ENST00000566669 PITPNM2Q9BZ72 1349 aa35.24■■■■□ 3.23
UBFD1-206ENST00000566669 CASP7P55210 303 aa35.23■■■■□ 3.23
UBFD1-206ENST00000566669 EXOSC9Q06265 439 aaKnown RBP35.23■■■■□ 3.23
UBFD1-206ENST00000566669 MYOZ2Q9NPC6 264 aa35.23■■■■□ 3.23
UBFD1-206ENST00000566669 PSME4Q14997 1843 aa35.22■■■■□ 3.23
UBFD1-206ENST00000566669 OGFOD1Q8N543 542 aa35.22■■■■□ 3.23
UBFD1-206ENST00000566669 STRIP1Q5VSL9 837 aa35.21■■■■□ 3.23
UBFD1-206ENST00000566669 RGMBQ6NW40 437 aa35.21■■■■□ 3.23
UBFD1-206ENST00000566669 ADM5C9JUS6 153 aa35.2■■■■□ 3.23
UBFD1-206ENST00000566669 SCARF1Q14162 830 aa35.2■■■■□ 3.23
UBFD1-206ENST00000566669 SALL2Q9Y467 1007 aaPredicted RBP35.2■■■■□ 3.23
UBFD1-206ENST00000566669 ANKRD18BA2A2Z9 1011 aa35.19■■■■□ 3.22
UBFD1-206ENST00000566669 ZNF804BA4D1E1 1349 aa35.19■■■■□ 3.22
UBFD1-206ENST00000566669 FKBP1BP68106 108 aa35.19■■■■□ 3.22
UBFD1-206ENST00000566669 FAM161AQ3B820 660 aa35.18■■■■□ 3.22
UBFD1-206ENST00000566669 ANGEL2Q5VTE6 544 aaKnown RBP35.17■■■■□ 3.22
UBFD1-206ENST00000566669 KCNJ4P48050 445 aa35.16■■■■□ 3.22
UBFD1-206ENST00000566669 DACT2Q5SW24 774 aa35.16■■■■□ 3.22
UBFD1-206ENST00000566669 IFIT5Q13325 482 aaKnown RBP35.15■■■■□ 3.22
UBFD1-206ENST00000566669 CDCA5Q96FF9 252 aa35.15■■■■□ 3.22
UBFD1-206ENST00000566669 BEND3Q5T5X7 828 aa35.14■■■■□ 3.22
UBFD1-206ENST00000566669 REM2Q8IYK8 340 aaPredicted RBP35.14■■■■□ 3.22
UBFD1-206ENST00000566669 ZNF157P51786 506 aaPredicted RBP35.13■■■■□ 3.21
UBFD1-206ENST00000566669 FAM9BQ8IZU0 186 aa35.12■■■■□ 3.21
UBFD1-206ENST00000566669 HDAC9Q9UKV0 1011 aa35.12■■■■□ 3.21
UBFD1-206ENST00000566669 POLR2AP24928 1970 aaKnown RBP35.12■■■■□ 3.21
UBFD1-206ENST00000566669 CHRNDQ07001 517 aa35.11■■■■□ 3.21
UBFD1-206ENST00000566669 TTLL5Q6EMB2 1281 aa35.11■■■■□ 3.21
UBFD1-206ENST00000566669 DLK2Q6UY11 383 aa35.11■■■■□ 3.21
UBFD1-206ENST00000566669 SAGE1Q9NXZ1 904 aa35.11■■■■□ 3.21
UBFD1-206ENST00000566669 FAM155AB1AL88 458 aaPredicted RBP35.1■■■■□ 3.21
UBFD1-206ENST00000566669 ALDH1L1O75891 902 aa35.1■■■■□ 3.21
UBFD1-206ENST00000566669 C15orf52Q6ZUT6 534 aaKnown RBP35.1■■■■□ 3.21
UBFD1-206ENST00000566669 ABHD8Q96I13 439 aa35.1■■■■□ 3.21
UBFD1-206ENST00000566669 ASTN2O75129 1339 aaPredicted RBP35.09■■■■□ 3.21
UBFD1-206ENST00000566669 SPEF2Q9C093 1822 aa35.09■■■■□ 3.21
UBFD1-206ENST00000566669 WTIPA6NIX2 430 aaPredicted RBP35.09■■■■□ 3.21
UBFD1-206ENST00000566669 FBXW7Q969H0 707 aa35.09■■■■□ 3.21
UBFD1-206ENST00000566669 GRM8O00222 908 aa35.08■■■■□ 3.21
UBFD1-206ENST00000566669 FOXO4P98177 505 aa35.08■■■■□ 3.21
UBFD1-206ENST00000566669 SPINK5Q9NQ38 1064 aaPredicted RBP35.08■■■■□ 3.21
UBFD1-206ENST00000566669 F6X3S4 739 aa35.07■■■■□ 3.2
UBFD1-206ENST00000566669 SLC10A3P09131 477 aa35.07■■■■□ 3.2
UBFD1-206ENST00000566669 CCDC57Q2TAC2 916 aa35.07■■■■□ 3.2
UBFD1-206ENST00000566669 TXNRD3Q86VQ6 643 aa35.07■■■■□ 3.2
UBFD1-206ENST00000566669 C9orf78Q9NZ63 289 aaPredicted RBP35.06■■■■□ 3.2
UBFD1-206ENST00000566669 CHMP3Q9Y3E7 222 aa35.06■■■■□ 3.2
UBFD1-206ENST00000566669 NF2P35240 595 aa35.05■■■■□ 3.2
UBFD1-206ENST00000566669 WNT10BO00744 389 aa35.04■■■■□ 3.2
UBFD1-206ENST00000566669 CD209Q9NNX6 404 aa35.04■■■■□ 3.2
UBFD1-206ENST00000566669 TSKSQ9UJT2 592 aa35.04■■■■□ 3.2
UBFD1-206ENST00000566669 PAPPA2Q9BXP8 1791 aa35.03■■■■□ 3.2
UBFD1-206ENST00000566669 KIF23Q02241 960 aaPredicted RBP35.03■■■■□ 3.2
UBFD1-206ENST00000566669 NBPF9Q3BBW0 867 aa35.03■■■■□ 3.2
UBFD1-206ENST00000566669 TAF7LQ5H9L4 462 aa35.03■■■■□ 3.2
UBFD1-206ENST00000566669 LMBR1LQ6UX01 489 aa35.03■■■■□ 3.2
UBFD1-206ENST00000566669 ZNF804AQ7Z570 1209 aa35.03■■■■□ 3.2
UBFD1-206ENST00000566669 SRCIN1Q9C0H9 1055 aa35.03■■■■□ 3.2
UBFD1-206ENST00000566669 GTF2IP78347 998 aa35.02■■■■□ 3.2
UBFD1-206ENST00000566669 APOBEC3FQ8IUX4 373 aaKnown RBP35.02■■■■□ 3.2
UBFD1-206ENST00000566669 LDHAL6AQ6ZMR3 332 aa35.01■■■■□ 3.2
UBFD1-206ENST00000566669 FKBP1AP62942 108 aaKnown RBP35■■■■□ 3.19
UBFD1-206ENST00000566669 ZIC5Q96T25 663 aa35■■■■□ 3.19
UBFD1-206ENST00000566669 MXD3Q9BW11 206 aa35■■■■□ 3.19
UBFD1-206ENST00000566669 ZNF521Q96K83 1311 aa35■■■■□ 3.19
UBFD1-206ENST00000566669 KLRK1P26718 216 aa34.99■■■■□ 3.19
UBFD1-206ENST00000566669 IL1R1P14778 569 aa34.98■■■■□ 3.19
UBFD1-206ENST00000566669 SLC4A10Q6U841 1118 aa34.98■■■■□ 3.19
UBFD1-206ENST00000566669 KIAA0825Q8IV33 1275 aa34.98■■■■□ 3.19
UBFD1-206ENST00000566669 CNNM1Q9NRU3 951 aa34.97■■■■□ 3.19
UBFD1-206ENST00000566669 IRS2Q9Y4H2 1338 aa34.97■■■■□ 3.19
UBFD1-206ENST00000566669 TAF5LO75529 589 aa34.96■■■■□ 3.19
UBFD1-206ENST00000566669 RASAL3Q86YV0 1011 aa34.96■■■■□ 3.19
UBFD1-206ENST00000566669 MTMR14Q8NCE2 650 aa34.96■■■■□ 3.19
UBFD1-206ENST00000566669 COL1A1P02452 1464 aaPredicted RBP34.96■■■■□ 3.19
UBFD1-206ENST00000566669 ZNF646O15015 1829 aaPredicted RBP34.95■■■■□ 3.19
UBFD1-206ENST00000566669 E9PSI1 815 aa34.94■■■■□ 3.18
UBFD1-206ENST00000566669 DLGAP5Q15398 846 aa34.94■■■■□ 3.18
UBFD1-206ENST00000566669 HELBQ8NG08 1087 aaPredicted RBP34.94■■■■□ 3.18
UBFD1-206ENST00000566669 ZBED3Q96IU2 234 aaPredicted RBP34.94■■■■□ 3.18
UBFD1-206ENST00000566669 CSRNP1Q96S65 589 aa34.94■■■■□ 3.18
UBFD1-206ENST00000566669 PTPRCP08575 1304 aa34.94■■■■□ 3.18
UBFD1-206ENST00000566669 EPHA10Q5JZY3 1008 aa34.93■■■■□ 3.18
UBFD1-206ENST00000566669 RNF186Q9NXI6 227 aa34.93■■■■□ 3.18
UBFD1-206ENST00000566669 UTYO14607 1347 aa34.92■■■■□ 3.18
UBFD1-206ENST00000566669 MYO1BO43795 1136 aa34.92■■■■□ 3.18
UBFD1-206ENST00000566669 SASH1O94885 1247 aa34.92■■■■□ 3.18
UBFD1-206ENST00000566669 UBE4AQ14139 1066 aa34.92■■■■□ 3.18
UBFD1-206ENST00000566669 TTLL12Q14166 644 aaPredicted RBP34.92■■■■□ 3.18
UBFD1-206ENST00000566669 ARMC9Q7Z3E5 817 aa34.92■■■■□ 3.18
UBFD1-206ENST00000566669 PPP2R3BQ9Y5P8 575 aa34.92■■■■□ 3.18
UBFD1-206ENST00000566669 MCOLN1Q9GZU1 580 aa34.91■■■■□ 3.18
UBFD1-206ENST00000566669 TRPA1O75762 1119 aa34.9■■■■□ 3.18
UBFD1-206ENST00000566669 DGKZQ13574 1117 aa34.89■■■■□ 3.18
UBFD1-206ENST00000566669 CCDC85CA6NKD9 419 aa34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms