RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 HSPA5P11021 654 aaKnown RBP14.72□□□□□ -0.05
CAPN3-215ENST00000565559 DCTN1Q14203 1278 aa14.72□□□□□ -0.05
CAPN3-215ENST00000565559 CC2D1BQ5T0F9 858 aaKnown RBP14.72□□□□□ -0.05
CAPN3-215ENST00000565559 AGBL3Q8NEM8 1001 aa14.72□□□□□ -0.05
CAPN3-215ENST00000565559 ZC3H12CQ9C0D7 883 aaKnown RBP14.72□□□□□ -0.05
CAPN3-215ENST00000565559 RSPH6AQ9H0K4 717 aa14.72□□□□□ -0.05
CAPN3-215ENST00000565559 METRNQ9UJH8 293 aa14.72□□□□□ -0.05
CAPN3-215ENST00000565559 CEP290O15078 2479 aa14.72□□□□□ -0.05
CAPN3-215ENST00000565559 ERBB4Q15303 1308 aa14.71□□□□□ -0.05
CAPN3-215ENST00000565559 RBBP6Q7Z6E9 1792 aaKnown RBP14.71□□□□□ -0.05
CAPN3-215ENST00000565559 INHBEP58166 350 aa14.71□□□□□ -0.05
CAPN3-215ENST00000565559 HSP90AB3PQ58FF7 597 aa14.71□□□□□ -0.05
CAPN3-215ENST00000565559 OTUD5Q96G74 571 aa14.71□□□□□ -0.05
CAPN3-215ENST00000565559 MYOZ2Q9NPC6 264 aa14.71□□□□□ -0.05
CAPN3-215ENST00000565559 MIS18AQ9NYP9 233 aa14.71□□□□□ -0.05
CAPN3-215ENST00000565559 POLLQ9UGP5 575 aa14.71□□□□□ -0.05
CAPN3-215ENST00000565559 TRMT112Q9UI30 125 aaKnown RBP14.71□□□□□ -0.05
CAPN3-215ENST00000565559 SH3TC1Q8TE82 1336 aa14.7□□□□□ -0.06
CAPN3-215ENST00000565559 USP17L8P0C7I0 530 aa14.7□□□□□ -0.06
CAPN3-215ENST00000565559 C7P10643 843 aa14.7□□□□□ -0.06
CAPN3-215ENST00000565559 RSBN1LQ6PCB5 846 aaPredicted RBP14.7□□□□□ -0.06
CAPN3-215ENST00000565559 ARMC9Q7Z3E5 817 aa14.7□□□□□ -0.06
CAPN3-215ENST00000565559 EFCC1Q9HA90 598 aa14.7□□□□□ -0.06
CAPN3-215ENST00000565559 SZT2Q5T011 3432 aa14.69□□□□□ -0.06
CAPN3-215ENST00000565559 MANSC4A6NHS7 340 aaPredicted RBP14.69□□□□□ -0.06
CAPN3-215ENST00000565559 GPSM2P81274 684 aa14.69□□□□□ -0.06
CAPN3-215ENST00000565559 SLC4A8Q2Y0W8 1093 aa14.69□□□□□ -0.06
CAPN3-215ENST00000565559 NBPF11Q86T75 865 aa14.69□□□□□ -0.06
CAPN3-215ENST00000565559 EFCAB3Q8N7B9 438 aa14.69□□□□□ -0.06
CAPN3-215ENST00000565559 CFAP53Q96M91 514 aa14.69□□□□□ -0.06
CAPN3-215ENST00000565559 NUDCQ9Y266 331 aa14.69□□□□□ -0.06
CAPN3-215ENST00000565559 HTTP42858 3142 aa14.68□□□□□ -0.06
CAPN3-215ENST00000565559 ZNF609O15014 1411 aa14.68□□□□□ -0.06
CAPN3-215ENST00000565559 PRAMEF18Q5VWM3 479 aa14.68□□□□□ -0.06
CAPN3-215ENST00000565559 SPRYD7Q5W111 196 aa14.68□□□□□ -0.06
CAPN3-215ENST00000565559 TBC1D16Q8TBP0 767 aa14.68□□□□□ -0.06
CAPN3-215ENST00000565559 SCAF8Q9UPN6 1271 aaKnown RBP14.68□□□□□ -0.06
CAPN3-215ENST00000565559 DDX60Q8IY21 1712 aaKnown RBP14.68□□□□□ -0.06
CAPN3-215ENST00000565559 LRRC37AA6NMS7 1700 aa14.67□□□□□ -0.06
CAPN3-215ENST00000565559 PTPN12Q05209 780 aaKnown RBP14.67□□□□□ -0.06
CAPN3-215ENST00000565559 OTUD7BQ6GQQ9 843 aa14.67□□□□□ -0.06
CAPN3-215ENST00000565559 NLRP10Q86W26 655 aa14.67□□□□□ -0.06
CAPN3-215ENST00000565559 CD99L2Q8TCZ2 262 aa14.67□□□□□ -0.06
CAPN3-215ENST00000565559 ZNF333Q96JL9 665 aa14.67□□□□□ -0.06
CAPN3-215ENST00000565559 RBM27Q9P2N5 1060 aaKnown RBP14.67□□□□□ -0.06
CAPN3-215ENST00000565559 ANKRD36CQ5JPF3 1778 aa14.67□□□□□ -0.06
CAPN3-215ENST00000565559 EIF4A1P60842 406 aaKnown RBP14.66□□□□□ -0.06
CAPN3-215ENST00000565559 ARHGEF6Q15052 776 aa14.66□□□□□ -0.06
CAPN3-215ENST00000565559 SLC9C1Q4G0N8 1177 aa14.66□□□□□ -0.06
CAPN3-215ENST00000565559 CELF1Q92879 486 aaKnown RBP14.66□□□□□ -0.06
CAPN3-215ENST00000565559 SEC24BO95487 1268 aa14.65□□□□□ -0.06
CAPN3-215ENST00000565559 U2AF1L5P0DN76 240 aaPredicted RBP14.65□□□□□ -0.06
CAPN3-215ENST00000565559 U2AF1Q01081 240 aaKnown RBP eCLIP14.65□□□□□ -0.06
CAPN3-215ENST00000565559 PRKG1Q13976 671 aa14.65□□□□□ -0.06
CAPN3-215ENST00000565559 A0A0C4DFX4 3053 aa14.64□□□□□ -0.07
CAPN3-215ENST00000565559 UFL1O94874 794 aa14.64□□□□□ -0.07
CAPN3-215ENST00000565559 ZBTB48P10074 688 aaPredicted RBP14.64□□□□□ -0.07
CAPN3-215ENST00000565559 SP3Q02447 781 aa14.64□□□□□ -0.07
CAPN3-215ENST00000565559 IER5LQ5T953 404 aa14.64□□□□□ -0.07
CAPN3-215ENST00000565559 OGFOD1Q8N543 542 aa14.64□□□□□ -0.07
CAPN3-215ENST00000565559 DPF3Q92784 378 aa14.64□□□□□ -0.07
CAPN3-215ENST00000565559 SLC10A4Q96EP9 437 aa14.64□□□□□ -0.07
CAPN3-215ENST00000565559 THUMPD2Q9BTF0 503 aaKnown RBP14.64□□□□□ -0.07
CAPN3-215ENST00000565559 ANKIB1Q9P2G1 1089 aa14.64□□□□□ -0.07
CAPN3-215ENST00000565559 ANGEL1Q9UNK9 670 aaKnown RBP14.64□□□□□ -0.07
CAPN3-215ENST00000565559 LAMB2P55268 1798 aa14.63□□□□□ -0.07
CAPN3-215ENST00000565559 NEFMP07197 916 aa14.63□□□□□ -0.07
CAPN3-215ENST00000565559 ZEB1P37275 1124 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-215ENST00000565559 CNGB1Q14028 1251 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-215ENST00000565559 NBPF9Q3BBW0 867 aa14.63□□□□□ -0.07
CAPN3-215ENST00000565559 LDLRAD1Q5T700 205 aa14.63□□□□□ -0.07
CAPN3-215ENST00000565559 GGA1Q9UJY5 639 aa14.63□□□□□ -0.07
CAPN3-215ENST00000565559 USP17L3A6NCW0 530 aa14.62□□□□□ -0.07
CAPN3-215ENST00000565559 USP17L4A6NCW7 530 aa14.62□□□□□ -0.07
CAPN3-215ENST00000565559 IGF2BP3O00425 579 aaKnown RBP eCLIP14.62□□□□□ -0.07
CAPN3-215ENST00000565559 CRHR2Q13324 411 aa14.62□□□□□ -0.07
CAPN3-215ENST00000565559 SF3B3Q15393 1217 aaKnown RBP14.62□□□□□ -0.07
CAPN3-215ENST00000565559 USP17L1Q7RTZ2 530 aa14.62□□□□□ -0.07
CAPN3-215ENST00000565559 HS6ST3Q8IZP7 471 aa14.62□□□□□ -0.07
CAPN3-215ENST00000565559 GMLQ99445 158 aa14.62□□□□□ -0.07
CAPN3-215ENST00000565559 PODXL2Q9NZ53 605 aa14.62□□□□□ -0.07
CAPN3-215ENST00000565559 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.62□□□□□ -0.07
CAPN3-215ENST00000565559 CENPFP49454 3210 aa14.62□□□□□ -0.07
CAPN3-215ENST00000565559 PER1O15534 1290 aaPredicted RBP14.61□□□□□ -0.07
CAPN3-215ENST00000565559 EIF2S2P20042 333 aaKnown RBP14.61□□□□□ -0.07
CAPN3-215ENST00000565559 RPS8P62241 208 aaKnown RBP14.61□□□□□ -0.07
CAPN3-215ENST00000565559 IRX5P78411 483 aaPredicted RBP14.61□□□□□ -0.07
CAPN3-215ENST00000565559 APOBEC3FQ8IUX4 373 aaKnown RBP14.61□□□□□ -0.07
CAPN3-215ENST00000565559 BRCA2P51587 3418 aa14.61□□□□□ -0.07
CAPN3-215ENST00000565559 MYCP01106 439 aaPredicted RBP14.6□□□□□ -0.07
CAPN3-215ENST00000565559 AIMP1Q12904 312 aaKnown RBP14.6□□□□□ -0.07
CAPN3-215ENST00000565559 COPS6Q7L5N1 327 aa14.6□□□□□ -0.07
CAPN3-215ENST00000565559 LRP10Q7Z4F1 713 aa14.6□□□□□ -0.07
CAPN3-215ENST00000565559 PODNQ7Z5L7 613 aa14.6□□□□□ -0.07
CAPN3-215ENST00000565559 WNK4Q96J92 1243 aa14.6□□□□□ -0.07
CAPN3-215ENST00000565559 PTCH2Q9Y6C5 1203 aa14.6□□□□□ -0.07
CAPN3-215ENST00000565559 WNT10BO00744 389 aa14.59□□□□□ -0.07
CAPN3-215ENST00000565559 PDIA6Q15084 440 aa14.59□□□□□ -0.07
CAPN3-215ENST00000565559 HTATIP2Q9BUP3 242 aa14.59□□□□□ -0.07
CAPN3-215ENST00000565559 SCN9AQ15858 1988 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms