RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 EXOSC9Q06265 439 aaKnown RBP24.12■■□□□ 1.45
SPSB3-207ENST00000565550 ZIC5Q96T25 663 aa24.12■■□□□ 1.45
SPSB3-207ENST00000565550 PLA2G12BQ9BX93 195 aa24.12■■□□□ 1.45
SPSB3-207ENST00000565550 IGHMBP2P38935 993 aaKnown RBP24.11■■□□□ 1.45
SPSB3-207ENST00000565550 NOGQ13253 232 aa24.11■■□□□ 1.45
SPSB3-207ENST00000565550 LINS1Q8NG48 757 aa24.11■■□□□ 1.45
SPSB3-207ENST00000565550 MYH16Q9H6N6 1097 aa24.11■■□□□ 1.45
SPSB3-207ENST00000565550 MED23Q9ULK4 1368 aa24.11■■□□□ 1.45
SPSB3-207ENST00000565550 POLR2AP24928 1970 aaKnown RBP24.11■■□□□ 1.45
SPSB3-207ENST00000565550 ZNF609O15014 1411 aa24.1■■□□□ 1.45
SPSB3-207ENST00000565550 CA12O43570 354 aa24.1■■□□□ 1.45
SPSB3-207ENST00000565550 ITGA6P23229 1130 aa24.1■■□□□ 1.45
SPSB3-207ENST00000565550 ANGEL2Q5VTE6 544 aaKnown RBP24.1■■□□□ 1.45
SPSB3-207ENST00000565550 RGMBQ6NW40 437 aa24.1■■□□□ 1.45
SPSB3-207ENST00000565550 CDCA7LQ96GN5 454 aa24.1■■□□□ 1.45
SPSB3-207ENST00000565550 MYOZ2Q9NPC6 264 aa24.1■■□□□ 1.45
SPSB3-207ENST00000565550 CSF1RP07333 972 aa24.09■■□□□ 1.45
SPSB3-207ENST00000565550 FAM161AQ3B820 660 aa24.09■■□□□ 1.45
SPSB3-207ENST00000565550 ABHD8Q96I13 439 aa24.09■■□□□ 1.45
SPSB3-207ENST00000565550 LEMD3Q9Y2U8 911 aa24.09■■□□□ 1.45
SPSB3-207ENST00000565550 FAM155AB1AL88 458 aaPredicted RBP24.08■■□□□ 1.45
SPSB3-207ENST00000565550 TXNRD3Q86VQ6 643 aa24.08■■□□□ 1.45
SPSB3-207ENST00000565550 CDCA5Q96FF9 252 aa24.08■■□□□ 1.45
SPSB3-207ENST00000565550 MXD3Q9BW11 206 aa24.08■■□□□ 1.45
SPSB3-207ENST00000565550 CACNA1FO60840 1977 aa24.07■■□□□ 1.44
SPSB3-207ENST00000565550 DACT2Q5SW24 774 aa24.07■■□□□ 1.44
SPSB3-207ENST00000565550 FBXW7Q969H0 707 aa24.07■■□□□ 1.44
SPSB3-207ENST00000565550 MPHOSPH8Q99549 860 aa24.07■■□□□ 1.44
SPSB3-207ENST00000565550 COA1Q9GZY4 146 aa24.07■■□□□ 1.44
SPSB3-207ENST00000565550 ZNF157P51786 506 aaPredicted RBP24.06■■□□□ 1.44
SPSB3-207ENST00000565550 CCDC102AQ96A19 550 aa24.06■■□□□ 1.44
SPSB3-207ENST00000565550 ANKRD2Q9GZV1 360 aa24.06■■□□□ 1.44
SPSB3-207ENST00000565550 ZNF804BA4D1E1 1349 aa24.06■■□□□ 1.44
SPSB3-207ENST00000565550 F6X3S4 739 aa24.05■■□□□ 1.44
SPSB3-207ENST00000565550 STRIP1Q5VSL9 837 aa24.05■■□□□ 1.44
SPSB3-207ENST00000565550 MYH3P11055 1940 aa24.05■■□□□ 1.44
SPSB3-207ENST00000565550 KLRK1P26718 216 aa24.04■■□□□ 1.44
SPSB3-207ENST00000565550 KIF23Q02241 960 aaPredicted RBP24.04■■□□□ 1.44
SPSB3-207ENST00000565550 SCAF8Q9UPN6 1271 aaKnown RBP24.04■■□□□ 1.44
SPSB3-207ENST00000565550 ANKRD18BA2A2Z9 1011 aa24.03■■□□□ 1.44
SPSB3-207ENST00000565550 CHRNDQ07001 517 aa24.03■■□□□ 1.44
SPSB3-207ENST00000565550 SLFN5Q08AF3 891 aa24.03■■□□□ 1.44
SPSB3-207ENST00000565550 NBPF9Q3BBW0 867 aa24.03■■□□□ 1.44
SPSB3-207ENST00000565550 BEND3Q5T5X7 828 aa24.03■■□□□ 1.44
SPSB3-207ENST00000565550 OGFOD1Q8N543 542 aa24.03■■□□□ 1.44
SPSB3-207ENST00000565550 PITPNM2Q9BZ72 1349 aa24.03■■□□□ 1.44
SPSB3-207ENST00000565550 FOXO4P98177 505 aa24.02■■□□□ 1.44
SPSB3-207ENST00000565550 HNRNPUQ00839 825 aaKnown RBP eCLIP24.02■■□□□ 1.44
SPSB3-207ENST00000565550 TTLL5Q6EMB2 1281 aa24.02■■□□□ 1.44
SPSB3-207ENST00000565550 PSME4Q14997 1843 aa24.02■■□□□ 1.44
SPSB3-207ENST00000565550 SPEF2Q9C093 1822 aa24.02■■□□□ 1.44
SPSB3-207ENST00000565550 MYO3BQ8WXR4 1341 aa24.02■■□□□ 1.44
SPSB3-207ENST00000565550 KCNJ4P48050 445 aa24.01■■□□□ 1.43
SPSB3-207ENST00000565550 SLC10A3P09131 477 aa24■■□□□ 1.43
SPSB3-207ENST00000565550 IFIT5Q13325 482 aaKnown RBP24■■□□□ 1.43
SPSB3-207ENST00000565550 E9PSI1 815 aa23.99■■□□□ 1.43
SPSB3-207ENST00000565550 SNAP23O00161 211 aa23.99■■□□□ 1.43
SPSB3-207ENST00000565550 WNT10BO00744 389 aa23.99■■□□□ 1.43
SPSB3-207ENST00000565550 TAF5LO75529 589 aa23.99■■□□□ 1.43
SPSB3-207ENST00000565550 GTF2IP78347 998 aa23.99■■□□□ 1.43
SPSB3-207ENST00000565550 PRAMEF18Q5VWM3 479 aa23.99■■□□□ 1.43
SPSB3-207ENST00000565550 HELBQ8NG08 1087 aaPredicted RBP23.99■■□□□ 1.43
SPSB3-207ENST00000565550 CHMP3Q9Y3E7 222 aa23.99■■□□□ 1.43
SPSB3-207ENST00000565550 FKBP1BP68106 108 aa23.98■■□□□ 1.43
SPSB3-207ENST00000565550 CD209Q9NNX6 404 aa23.98■■□□□ 1.43
SPSB3-207ENST00000565550 CCDC85CA6NKD9 419 aa23.97■■□□□ 1.43
SPSB3-207ENST00000565550 EPHA10Q5JZY3 1008 aa23.97■■□□□ 1.43
SPSB3-207ENST00000565550 LMBR1LQ6UX01 489 aa23.97■■□□□ 1.43
SPSB3-207ENST00000565550 MOB2Q70IA6 237 aa23.97■■□□□ 1.43
SPSB3-207ENST00000565550 KIAA0825Q8IV33 1275 aa23.97■■□□□ 1.43
SPSB3-207ENST00000565550 CSRNP1Q96S65 589 aa23.97■■□□□ 1.43
SPSB3-207ENST00000565550 MCOLN1Q9GZU1 580 aa23.97■■□□□ 1.43
SPSB3-207ENST00000565550 GRM8O00222 908 aa23.96■■□□□ 1.43
SPSB3-207ENST00000565550 SASH1O94885 1247 aa23.96■■□□□ 1.43
SPSB3-207ENST00000565550 MMP14P50281 582 aa23.96■■□□□ 1.43
SPSB3-207ENST00000565550 RASAL3Q86YV0 1011 aa23.96■■□□□ 1.43
SPSB3-207ENST00000565550 TRMT2AQ8IZ69 625 aaKnown RBP23.96■■□□□ 1.43
SPSB3-207ENST00000565550 RNF186Q9NXI6 227 aa23.96■■□□□ 1.43
SPSB3-207ENST00000565550 SAGE1Q9NXZ1 904 aa23.96■■□□□ 1.43
SPSB3-207ENST00000565550 IRS2Q9Y4H2 1338 aa23.95■■□□□ 1.42
SPSB3-207ENST00000565550 CASP8AP2Q9UKL3 1982 aa23.95■■□□□ 1.42
SPSB3-207ENST00000565550 UBE2Q2LH0YL09 131 aa23.95■■□□□ 1.42
SPSB3-207ENST00000565550 TRPA1O75762 1119 aa23.95■■□□□ 1.42
SPSB3-207ENST00000565550 HDAC9Q9UKV0 1011 aa23.95■■□□□ 1.42
SPSB3-207ENST00000565550 DGKZQ13574 1117 aa23.94■■□□□ 1.42
SPSB3-207ENST00000565550 SLC4A10Q6U841 1118 aa23.94■■□□□ 1.42
SPSB3-207ENST00000565550 C15orf52Q6ZUT6 534 aaKnown RBP23.94■■□□□ 1.42
SPSB3-207ENST00000565550 ZNF594Q96JF6 807 aaPredicted RBP23.94■■□□□ 1.42
SPSB3-207ENST00000565550 C9orf78Q9NZ63 289 aaPredicted RBP23.94■■□□□ 1.42
SPSB3-207ENST00000565550 CCDC57Q2TAC2 916 aa23.93■■□□□ 1.42
SPSB3-207ENST00000565550 ALDH1L1O75891 902 aa23.92■■□□□ 1.42
SPSB3-207ENST00000565550 TTLL12Q14166 644 aaPredicted RBP23.92■■□□□ 1.42
SPSB3-207ENST00000565550 TAF7LQ5H9L4 462 aa23.92■■□□□ 1.42
SPSB3-207ENST00000565550 LDHAL6AQ6ZMR3 332 aa23.92■■□□□ 1.42
SPSB3-207ENST00000565550 ZBED3Q96IU2 234 aaPredicted RBP23.92■■□□□ 1.42
SPSB3-207ENST00000565550 ZNF646O15015 1829 aaPredicted RBP23.91■■□□□ 1.42
SPSB3-207ENST00000565550 PLIN1O60240 522 aa23.91■■□□□ 1.42
SPSB3-207ENST00000565550 REM2Q8IYK8 340 aaPredicted RBP23.91■■□□□ 1.42
SPSB3-207ENST00000565550 CERS5Q8N5B7 392 aa23.91■■□□□ 1.42
SPSB3-207ENST00000565550 SRCIN1Q9C0H9 1055 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms