RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 MYOZ2Q9NPC6 264 aa11□□□□□ -0.65
CAPN3-213ENST00000565173 MED23Q9ULK4 1368 aa11□□□□□ -0.65
CAPN3-213ENST00000565173 ITGA6P23229 1130 aa10.99□□□□□ -0.65
CAPN3-213ENST00000565173 DACT2Q5SW24 774 aa10.99□□□□□ -0.65
CAPN3-213ENST00000565173 LINS1Q8NG48 757 aa10.99□□□□□ -0.65
CAPN3-213ENST00000565173 DNAAF4Q8WXU2 420 aa10.99□□□□□ -0.65
CAPN3-213ENST00000565173 CDCA5Q96FF9 252 aa10.99□□□□□ -0.65
CAPN3-213ENST00000565173 MXD3Q9BW11 206 aa10.99□□□□□ -0.65
CAPN3-213ENST00000565173 MRS2Q9HD23 443 aa10.99□□□□□ -0.65
CAPN3-213ENST00000565173 SPINK5Q9NQ38 1064 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-213ENST00000565173 LEMD3Q9Y2U8 911 aa10.99□□□□□ -0.65
CAPN3-213ENST00000565173 ZNF646O15015 1829 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-213ENST00000565173 MYH3P11055 1940 aa10.99□□□□□ -0.65
CAPN3-213ENST00000565173 KLRK1P26718 216 aa10.98□□□□□ -0.65
CAPN3-213ENST00000565173 ZNF157P51786 506 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-213ENST00000565173 EXOSC9Q06265 439 aaKnown RBP10.98□□□□□ -0.65
CAPN3-213ENST00000565173 FAM161AQ3B820 660 aa10.98□□□□□ -0.65
CAPN3-213ENST00000565173 NBPF9Q3BBW0 867 aa10.98□□□□□ -0.65
CAPN3-213ENST00000565173 CCDC102AQ96A19 550 aa10.98□□□□□ -0.65
CAPN3-213ENST00000565173 COA1Q9GZY4 146 aa10.98□□□□□ -0.65
CAPN3-213ENST00000565173 SCAF8Q9UPN6 1271 aaKnown RBP10.98□□□□□ -0.65
CAPN3-213ENST00000565173 SALL2Q9Y467 1007 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-213ENST00000565173 PITPNM2Q9BZ72 1349 aa10.98□□□□□ -0.65
CAPN3-213ENST00000565173 SPEF2Q9C093 1822 aa10.98□□□□□ -0.65
CAPN3-213ENST00000565173 SLC10A3P09131 477 aa10.97□□□□□ -0.65
CAPN3-213ENST00000565173 IGHMBP2P38935 993 aaKnown RBP10.97□□□□□ -0.65
CAPN3-213ENST00000565173 FOXO4P98177 505 aa10.97□□□□□ -0.65
CAPN3-213ENST00000565173 KIF23Q02241 960 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-213ENST00000565173 FKBP5Q13451 457 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-213ENST00000565173 STRIP1Q5VSL9 837 aa10.97□□□□□ -0.65
CAPN3-213ENST00000565173 CSRNP1Q96S65 589 aa10.97□□□□□ -0.65
CAPN3-213ENST00000565173 MYH16Q9H6N6 1097 aa10.97□□□□□ -0.65
CAPN3-213ENST00000565173 IRS2Q9Y4H2 1338 aa10.97□□□□□ -0.65
CAPN3-213ENST00000565173 CASP8AP2Q9UKL3 1982 aa10.96□□□□□ -0.65
CAPN3-213ENST00000565173 ZNF804BA4D1E1 1349 aa10.96□□□□□ -0.65
CAPN3-213ENST00000565173 SNAP23O00161 211 aa10.96□□□□□ -0.65
CAPN3-213ENST00000565173 BEND3Q5T5X7 828 aa10.96□□□□□ -0.65
CAPN3-213ENST00000565173 ANKRD2Q9GZV1 360 aa10.96□□□□□ -0.65
CAPN3-213ENST00000565173 RNF186Q9NXI6 227 aa10.96□□□□□ -0.65
CAPN3-213ENST00000565173 SAGE1Q9NXZ1 904 aa10.96□□□□□ -0.65
CAPN3-213ENST00000565173 TNRC18O15417 2968 aaPredicted RBP10.96□□□□□ -0.66
CAPN3-213ENST00000565173 MYO3BQ8WXR4 1341 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 F6X3S4 739 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 WNT10BO00744 389 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 ANP32CO43423 234 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 RGS19P49795 217 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 FKBP1BP68106 108 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 CHRNDQ07001 517 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 PRAMEF18Q5VWM3 479 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 MOB2Q70IA6 237 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 RASAL3Q86YV0 1011 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 ZBED3Q96IU2 234 aaPredicted RBP10.95□□□□□ -0.66
CAPN3-213ENST00000565173 MPHOSPH8Q99549 860 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 MCOLN1Q9GZU1 580 aa10.95□□□□□ -0.66
CAPN3-213ENST00000565173 CACNA1FO60840 1977 aa10.94□□□□□ -0.66
CAPN3-213ENST00000565173 ZNF316A6NFI3 1004 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-213ENST00000565173 CCDC85CA6NKD9 419 aa10.94□□□□□ -0.66
CAPN3-213ENST00000565173 TAF5LO75529 589 aa10.94□□□□□ -0.66
CAPN3-213ENST00000565173 MMP14P50281 582 aa10.94□□□□□ -0.66
CAPN3-213ENST00000565173 EPHA10Q5JZY3 1008 aa10.94□□□□□ -0.66
CAPN3-213ENST00000565173 C15orf52Q6ZUT6 534 aaKnown RBP10.94□□□□□ -0.66
CAPN3-213ENST00000565173 OGFOD1Q8N543 542 aa10.94□□□□□ -0.66
CAPN3-213ENST00000565173 CD209Q9NNX6 404 aa10.94□□□□□ -0.66
CAPN3-213ENST00000565173 ANKRD18BA2A2Z9 1011 aa10.93□□□□□ -0.66
CAPN3-213ENST00000565173 UBE2Q2LH0YL09 131 aa10.93□□□□□ -0.66
CAPN3-213ENST00000565173 TRPA1O75762 1119 aa10.93□□□□□ -0.66
CAPN3-213ENST00000565173 GTF2IP78347 998 aa10.93□□□□□ -0.66
CAPN3-213ENST00000565173 DGKZQ13574 1117 aa10.93□□□□□ -0.66
CAPN3-213ENST00000565173 KIAA0825Q8IV33 1275 aa10.93□□□□□ -0.66
CAPN3-213ENST00000565173 HELBQ8NG08 1087 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-213ENST00000565173 FBXW7Q969H0 707 aa10.93□□□□□ -0.66
CAPN3-213ENST00000565173 PAPPA2Q9BXP8 1791 aa10.93□□□□□ -0.66
CAPN3-213ENST00000565173 GRM8O00222 908 aa10.92□□□□□ -0.66
CAPN3-213ENST00000565173 SASH1O94885 1247 aa10.92□□□□□ -0.66
CAPN3-213ENST00000565173 IFIT5Q13325 482 aaKnown RBP10.92□□□□□ -0.66
CAPN3-213ENST00000565173 LMBR1LQ6UX01 489 aa10.92□□□□□ -0.66
CAPN3-213ENST00000565173 REM2Q8IYK8 340 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-213ENST00000565173 CERS5Q8N5B7 392 aa10.92□□□□□ -0.66
CAPN3-213ENST00000565173 IL1R1P14778 569 aa10.91□□□□□ -0.66
CAPN3-213ENST00000565173 ZEB1P37275 1124 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-213ENST00000565173 KCNJ4P48050 445 aa10.91□□□□□ -0.66
CAPN3-213ENST00000565173 MTMR14Q8NCE2 650 aa10.91□□□□□ -0.66
CAPN3-213ENST00000565173 KAZALD1Q96I82 304 aa10.91□□□□□ -0.66
CAPN3-213ENST00000565173 ZNF594Q96JF6 807 aaPredicted RBP10.91□□□□□ -0.66
CAPN3-213ENST00000565173 ZNF521Q96K83 1311 aa10.9□□□□□ -0.66
CAPN3-213ENST00000565173 TM4SF4P48230 202 aa10.9□□□□□ -0.66
CAPN3-213ENST00000565173 LDLRAD1Q5T700 205 aa10.9□□□□□ -0.66
CAPN3-213ENST00000565173 FAM9BQ8IZU0 186 aa10.9□□□□□ -0.66
CAPN3-213ENST00000565173 HDAC9Q9UKV0 1011 aa10.9□□□□□ -0.66
CAPN3-213ENST00000565173 PCDHAC2Q9Y5I4 1007 aa10.9□□□□□ -0.66
CAPN3-213ENST00000565173 A0A1B0GUL6 1792 aa10.9□□□□□ -0.67
CAPN3-213ENST00000565173 AKAP11Q9UKA4 1901 aa10.9□□□□□ -0.67
CAPN3-213ENST00000565173 ALDH1L1O75891 902 aa10.89□□□□□ -0.67
CAPN3-213ENST00000565173 PTPN12Q05209 780 aaKnown RBP10.89□□□□□ -0.67
CAPN3-213ENST00000565173 CCDC57Q2TAC2 916 aa10.89□□□□□ -0.67
CAPN3-213ENST00000565173 LDHAL6AQ6ZMR3 332 aa10.89□□□□□ -0.67
CAPN3-213ENST00000565173 APOBEC3FQ8IUX4 373 aaKnown RBP10.89□□□□□ -0.67
CAPN3-213ENST00000565173 PRMT6Q96LA8 375 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-213ENST00000565173 CHMP3Q9Y3E7 222 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms