RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 A0A1B0GUL6 1792 aa12.73□□□□□ -0.37
CMTM3-209ENST00000565003 ADM5C9JUS6 153 aa12.72□□□□□ -0.37
CMTM3-209ENST00000565003 ALDH1L1O75891 902 aa12.72□□□□□ -0.37
CMTM3-209ENST00000565003 IFIT5Q13325 482 aaKnown RBP12.72□□□□□ -0.37
CMTM3-209ENST00000565003 CYP4F22Q6NT55 531 aa12.72□□□□□ -0.37
CMTM3-209ENST00000565003 LMBR1LQ6UX01 489 aa12.72□□□□□ -0.37
CMTM3-209ENST00000565003 PAXIP1Q6ZW49 1069 aaPredicted RBP12.72□□□□□ -0.37
CMTM3-209ENST00000565003 KRT26Q7Z3Y9 468 aa12.72□□□□□ -0.37
CMTM3-209ENST00000565003 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
CMTM3-209ENST00000565003 CDCA7LQ96GN5 454 aa12.72□□□□□ -0.37
CMTM3-209ENST00000565003 MXD3Q9BW11 206 aa12.72□□□□□ -0.37
CMTM3-209ENST00000565003 SRCIN1Q9C0H9 1055 aa12.72□□□□□ -0.37
CMTM3-209ENST00000565003 ANKRD2Q9GZV1 360 aa12.72□□□□□ -0.37
CMTM3-209ENST00000565003 COA1Q9GZY4 146 aa12.72□□□□□ -0.37
CMTM3-209ENST00000565003 WBP1LQ9NX94 342 aa12.72□□□□□ -0.37
CMTM3-209ENST00000565003 GGA3Q9NZ52 723 aa12.72□□□□□ -0.37
CMTM3-209ENST00000565003 IRS2Q9Y4H2 1338 aa12.71□□□□□ -0.37
CMTM3-209ENST00000565003 POLR2AP24928 1970 aaKnown RBP12.71□□□□□ -0.37
CMTM3-209ENST00000565003 SNAP23O00161 211 aa12.71□□□□□ -0.37
CMTM3-209ENST00000565003 GRM1Q13255 1194 aa12.71□□□□□ -0.37
CMTM3-209ENST00000565003 DACT2Q5SW24 774 aa12.71□□□□□ -0.37
CMTM3-209ENST00000565003 HELBQ8NG08 1087 aaPredicted RBP12.71□□□□□ -0.37
CMTM3-209ENST00000565003 SSH1Q8WYL5 1049 aa12.71□□□□□ -0.37
CMTM3-209ENST00000565003 DCPSQ96C86 337 aaKnown RBP12.71□□□□□ -0.37
CMTM3-209ENST00000565003 KAZALD1Q96I82 304 aa12.71□□□□□ -0.37
CMTM3-209ENST00000565003 ZNF594Q96JF6 807 aaPredicted RBP12.71□□□□□ -0.37
CMTM3-209ENST00000565003 C9orf78Q9NZ63 289 aaPredicted RBP12.71□□□□□ -0.37
CMTM3-209ENST00000565003 CCER2I3L3R5 266 aa12.7□□□□□ -0.38
CMTM3-209ENST00000565003 TAF5LO75529 589 aa12.7□□□□□ -0.38
CMTM3-209ENST00000565003 NBPF7P0C2Y1 421 aaPredicted RBP12.7□□□□□ -0.38
CMTM3-209ENST00000565003 USP17L8P0C7I0 530 aa12.7□□□□□ -0.38
CMTM3-209ENST00000565003 ECE1P42892 770 aa12.7□□□□□ -0.38
CMTM3-209ENST00000565003 FBXW7Q969H0 707 aa12.7□□□□□ -0.38
CMTM3-209ENST00000565003 SUCLG2Q96I99 432 aa12.7□□□□□ -0.38
CMTM3-209ENST00000565003 MYOZ2Q9NPC6 264 aa12.7□□□□□ -0.38
CMTM3-209ENST00000565003 UTYO14607 1347 aa12.69□□□□□ -0.38
CMTM3-209ENST00000565003 KCNJ4P48050 445 aa12.69□□□□□ -0.38
CMTM3-209ENST00000565003 SCARF1Q14162 830 aa12.69□□□□□ -0.38
CMTM3-209ENST00000565003 CCDC57Q2TAC2 916 aa12.69□□□□□ -0.38
CMTM3-209ENST00000565003 STRIP1Q5VSL9 837 aa12.69□□□□□ -0.38
CMTM3-209ENST00000565003 AIDAQ96BJ3 306 aa12.69□□□□□ -0.38
CMTM3-209ENST00000565003 PTPRCP08575 1304 aa12.68□□□□□ -0.38
CMTM3-209ENST00000565003 CTCFP49711 727 aaPredicted RBP12.68□□□□□ -0.38
CMTM3-209ENST00000565003 MAP2K1Q02750 393 aaPredicted RBP12.68□□□□□ -0.38
CMTM3-209ENST00000565003 ANGEL2Q5VTE6 544 aaKnown RBP12.68□□□□□ -0.38
CMTM3-209ENST00000565003 SULF1Q8IWU6 871 aa12.68□□□□□ -0.38
CMTM3-209ENST00000565003 TRMT2AQ8IZ69 625 aaKnown RBP12.68□□□□□ -0.38
CMTM3-209ENST00000565003 TNS4Q8IZW8 715 aa12.68□□□□□ -0.38
CMTM3-209ENST00000565003 HHIPL1Q96JK4 782 aa12.68□□□□□ -0.38
CMTM3-209ENST00000565003 MYO3BQ8WXR4 1341 aa12.67□□□□□ -0.38
CMTM3-209ENST00000565003 AOC2O75106 756 aa12.67□□□□□ -0.38
CMTM3-209ENST00000565003 TAF7LQ5H9L4 462 aa12.67□□□□□ -0.38
CMTM3-209ENST00000565003 TTLL5Q6EMB2 1281 aa12.67□□□□□ -0.38
CMTM3-209ENST00000565003 LDHAL6AQ6ZMR3 332 aa12.67□□□□□ -0.38
CMTM3-209ENST00000565003 C15orf52Q6ZUT6 534 aaKnown RBP12.67□□□□□ -0.38
CMTM3-209ENST00000565003 CDCA5Q96FF9 252 aa12.67□□□□□ -0.38
CMTM3-209ENST00000565003 BICC1Q9H694 974 aaKnown RBP12.67□□□□□ -0.38
CMTM3-209ENST00000565003 CD209Q9NNX6 404 aa12.67□□□□□ -0.38
CMTM3-209ENST00000565003 CNNM1Q9NRU3 951 aa12.67□□□□□ -0.38
CMTM3-209ENST00000565003 SCAF8Q9UPN6 1271 aaKnown RBP12.67□□□□□ -0.38
CMTM3-209ENST00000565003 HSPA8P11142 646 aaKnown RBP12.66□□□□□ -0.38
CMTM3-209ENST00000565003 LBX1P52954 281 aa12.66□□□□□ -0.38
CMTM3-209ENST00000565003 HUNKP57058 714 aa12.66□□□□□ -0.38
CMTM3-209ENST00000565003 GTF2IP78347 998 aa12.66□□□□□ -0.38
CMTM3-209ENST00000565003 NBPF9Q3BBW0 867 aa12.66□□□□□ -0.38
CMTM3-209ENST00000565003 ALDH1L2Q3SY69 923 aa12.66□□□□□ -0.38
CMTM3-209ENST00000565003 RABL6Q3YEC7 729 aaPredicted RBP12.66□□□□□ -0.38
CMTM3-209ENST00000565003 KIAA0825Q8IV33 1275 aa12.66□□□□□ -0.38
CMTM3-209ENST00000565003 OGFOD1Q8N543 542 aa12.66□□□□□ -0.38
CMTM3-209ENST00000565003 ANKRD44Q8N8A2 993 aa12.66□□□□□ -0.38
CMTM3-209ENST00000565003 PUS3Q9BZE2 481 aaKnown RBP12.66□□□□□ -0.38
CMTM3-209ENST00000565003 GBA2Q9HCG7 927 aaPredicted RBP12.66□□□□□ -0.38
CMTM3-209ENST00000565003 PRDM10Q9NQV6 1147 aa12.66□□□□□ -0.38
CMTM3-209ENST00000565003 SMC4Q9NTJ3 1288 aa12.66□□□□□ -0.38
CMTM3-209ENST00000565003 PITPNM2Q9BZ72 1349 aa12.65□□□□□ -0.38
CMTM3-209ENST00000565003 WNT10BO00744 389 aa12.65□□□□□ -0.38
CMTM3-209ENST00000565003 PLIN1O60240 522 aa12.65□□□□□ -0.38
CMTM3-209ENST00000565003 SASH1O94885 1247 aa12.65□□□□□ -0.38
CMTM3-209ENST00000565003 MAP2K2P36507 400 aa12.65□□□□□ -0.38
CMTM3-209ENST00000565003 CERS5Q8N5B7 392 aa12.65□□□□□ -0.38
CMTM3-209ENST00000565003 ZIC5Q96T25 663 aa12.65□□□□□ -0.38
CMTM3-209ENST00000565003 IL1R1P14778 569 aa12.64□□□□□ -0.39
CMTM3-209ENST00000565003 RGMBQ6NW40 437 aa12.64□□□□□ -0.39
CMTM3-209ENST00000565003 ZNF804AQ7Z570 1209 aa12.64□□□□□ -0.39
CMTM3-209ENST00000565003 C2orf69Q8N8R5 385 aa12.64□□□□□ -0.39
CMTM3-209ENST00000565003 USP44Q9H0E7 712 aa12.64□□□□□ -0.39
CMTM3-209ENST00000565003 FAM155AB1AL88 458 aaPredicted RBP12.63□□□□□ -0.39
CMTM3-209ENST00000565003 CT47B1P0C2W7 299 aaPredicted RBP12.63□□□□□ -0.39
CMTM3-209ENST00000565003 BRPF1P55201 1214 aaPredicted RBP12.63□□□□□ -0.39
CMTM3-209ENST00000565003 LRRC24Q50LG9 513 aa12.63□□□□□ -0.39
CMTM3-209ENST00000565003 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
CMTM3-209ENST00000565003 JAG2Q9Y219 1238 aa12.63□□□□□ -0.39
CMTM3-209ENST00000565003 RIPOR2Q9Y4F9 1068 aa12.63□□□□□ -0.39
CMTM3-209ENST00000565003 PAPPA2Q9BXP8 1791 aa12.62□□□□□ -0.39
CMTM3-209ENST00000565003 CAPN15O75808 1086 aa12.62□□□□□ -0.39
CMTM3-209ENST00000565003 NOGQ13253 232 aa12.62□□□□□ -0.39
CMTM3-209ENST00000565003 UBE4AQ14139 1066 aa12.62□□□□□ -0.39
CMTM3-209ENST00000565003 PRAMEF18Q5VWM3 479 aa12.62□□□□□ -0.39
CMTM3-209ENST00000565003 KLHDC4Q8TBB5 520 aa12.62□□□□□ -0.39
CMTM3-209ENST00000565003 ZBED3Q96IU2 234 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms