RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ANKRD65E5RJM6 399 aa18.98■□□□□ 0.63
LINC00554-201ENST00000564841 DHX16O60231 1041 aaKnown RBP18.98■□□□□ 0.63
LINC00554-201ENST00000564841 NEMFO60524 1076 aa18.98■□□□□ 0.63
LINC00554-201ENST00000564841 CREB3L3Q68CJ9 461 aa18.98■□□□□ 0.63
LINC00554-201ENST00000564841 TTC5Q8N0Z6 440 aa18.98■□□□□ 0.63
LINC00554-201ENST00000564841 SSH3Q8TE77 659 aa18.98■□□□□ 0.63
LINC00554-201ENST00000564841 ADCY9O60503 1353 aa18.98■□□□□ 0.63
LINC00554-201ENST00000564841 PTCD1O75127 700 aaKnown RBP18.98■□□□□ 0.63
LINC00554-201ENST00000564841 URI1O94763 535 aaPredicted RBP18.98■□□□□ 0.63
LINC00554-201ENST00000564841 CHGBP05060 677 aa18.98■□□□□ 0.63
LINC00554-201ENST00000564841 NECTIN1Q15223 517 aa18.98■□□□□ 0.63
LINC00554-201ENST00000564841 RGS22Q8NE09 1264 aa18.98■□□□□ 0.63
LINC00554-201ENST00000564841 SMC2O95347 1197 aa18.97■□□□□ 0.63
LINC00554-201ENST00000564841 NOP2P46087 812 aaKnown RBP18.97■□□□□ 0.63
LINC00554-201ENST00000564841 CCAR1Q8IX12 1150 aaKnown RBP18.97■□□□□ 0.63
LINC00554-201ENST00000564841 EDC3Q96F86 508 aaKnown RBP18.97■□□□□ 0.63
LINC00554-201ENST00000564841 TOMM22Q9NS69 142 aa18.97■□□□□ 0.63
LINC00554-201ENST00000564841 CABP4P57796 275 aa18.97■□□□□ 0.63
LINC00554-201ENST00000564841 BRF1Q92994 677 aa18.97■□□□□ 0.63
LINC00554-201ENST00000564841 SLIT3O75094 1523 aa18.97■□□□□ 0.63
LINC00554-201ENST00000564841 MEGF6O75095 1541 aa18.97■□□□□ 0.63
LINC00554-201ENST00000564841 TBC1D8O95759 1140 aa18.96■□□□□ 0.63
LINC00554-201ENST00000564841 REXO1L1PQ8IX06 675 aa18.96■□□□□ 0.63
LINC00554-201ENST00000564841 XPO4Q9C0E2 1151 aaKnown RBP18.96■□□□□ 0.63
LINC00554-201ENST00000564841 TSPYL1Q9H0U9 437 aa18.96■□□□□ 0.63
LINC00554-201ENST00000564841 SLC52A2Q9HAB3 445 aa18.96■□□□□ 0.63
LINC00554-201ENST00000564841 LMAN1P49257 510 aa18.96■□□□□ 0.63
LINC00554-201ENST00000564841 STX1AQ16623 288 aa18.95■□□□□ 0.62
LINC00554-201ENST00000564841 RIC3Q7Z5B4 369 aa18.95■□□□□ 0.62
LINC00554-201ENST00000564841 BABAM1Q9NWV8 329 aa18.95■□□□□ 0.62
LINC00554-201ENST00000564841 IFNKQ9P0W0 207 aa18.95■□□□□ 0.62
LINC00554-201ENST00000564841 TRPM3Q9HCF6 1732 aaPredicted RBP18.95■□□□□ 0.62
LINC00554-201ENST00000564841 SMC1AQ14683 1233 aaKnown RBP18.95■□□□□ 0.62
LINC00554-201ENST00000564841 FOXR1Q6PIV2 292 aa18.95■□□□□ 0.62
LINC00554-201ENST00000564841 TXLNBQ8N3L3 684 aa18.95■□□□□ 0.62
LINC00554-201ENST00000564841 ZKSCAN1P17029 563 aaPredicted RBP18.95■□□□□ 0.62
LINC00554-201ENST00000564841 TPM4P67936 248 aa18.95■□□□□ 0.62
LINC00554-201ENST00000564841 TOB2Q14106 344 aaPredicted RBP18.95■□□□□ 0.62
LINC00554-201ENST00000564841 ISM2Q6H9L7 571 aa18.95■□□□□ 0.62
LINC00554-201ENST00000564841 MNS1Q8NEH6 495 aa18.95■□□□□ 0.62
LINC00554-201ENST00000564841 TLR7Q9NYK1 1049 aaKnown RBP18.95■□□□□ 0.62
LINC00554-201ENST00000564841 BIN1O00499 593 aa18.94■□□□□ 0.62
LINC00554-201ENST00000564841 RNF20Q5VTR2 975 aa18.94■□□□□ 0.62
LINC00554-201ENST00000564841 AACSQ86V21 672 aa18.94■□□□□ 0.62
LINC00554-201ENST00000564841 LRRC2Q9BYS8 371 aa18.94■□□□□ 0.62
LINC00554-201ENST00000564841 LMTK3Q96Q04 1460 aa18.94■□□□□ 0.62
LINC00554-201ENST00000564841 EPB41L2O43491 1005 aaKnown RBP18.94■□□□□ 0.62
LINC00554-201ENST00000564841 BEND3Q5T5X7 828 aa18.94■□□□□ 0.62
LINC00554-201ENST00000564841 LOC102724159A0A0B4J2E5 919 aa18.93■□□□□ 0.62
LINC00554-201ENST00000564841 PDCP20941 246 aa18.93■□□□□ 0.62
LINC00554-201ENST00000564841 GNL2Q13823 731 aaKnown RBP18.93■□□□□ 0.62
LINC00554-201ENST00000564841 PWP2Q15269 919 aaKnown RBP18.93■□□□□ 0.62
LINC00554-201ENST00000564841 BOLA2Q9H3K6 86 aa18.93■□□□□ 0.62
LINC00554-201ENST00000564841 SLC27A2O14975 620 aa18.93■□□□□ 0.62
LINC00554-201ENST00000564841 FAM193AP78312 1265 aa18.93■□□□□ 0.62
LINC00554-201ENST00000564841 CREBRFQ8IUR6 639 aa18.93■□□□□ 0.62
LINC00554-201ENST00000564841 AOX1Q06278 1338 aa18.93■□□□□ 0.62
LINC00554-201ENST00000564841 EVCP57679 992 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 RESTQ13127 1097 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 COPS6Q7L5N1 327 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 KLHL34Q8N239 644 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 ATG3Q9NT62 314 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 H3BQV1 296 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 GUCY1B3Q02153 619 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 MUM1L1Q5H9M0 696 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 IFFO2Q5TF58 517 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 XAGE3Q8WTP9 111 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 H3BQF6 201 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 BLOC1S2Q6QNY1 142 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 ZSWIM4Q9H7M6 989 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 ARGLU1Q9NWB6 273 aaPredicted RBP18.92■□□□□ 0.62
LINC00554-201ENST00000564841 TAOK2Q9UL54 1235 aa18.92■□□□□ 0.62
LINC00554-201ENST00000564841 TADA3O75528 432 aa18.91■□□□□ 0.62
LINC00554-201ENST00000564841 SFPQP23246 707 aaKnown RBP eCLIP18.91■□□□□ 0.62
LINC00554-201ENST00000564841 NMIQ13287 307 aaPredicted RBP18.91■□□□□ 0.62
LINC00554-201ENST00000564841 DPCR1Q3MIW9 517 aa18.91■□□□□ 0.62
LINC00554-201ENST00000564841 TM6SF1Q9BZW5 370 aa18.91■□□□□ 0.62
LINC00554-201ENST00000564841 ATP5J2-PTCD1G3V325 749 aa18.91■□□□□ 0.62
LINC00554-201ENST00000564841 CASQ1P31415 396 aa18.91■□□□□ 0.62
LINC00554-201ENST00000564841 ETF1P62495 437 aaKnown RBP18.91■□□□□ 0.62
LINC00554-201ENST00000564841 ADAM21Q9UKJ8 722 aa18.91■□□□□ 0.62
LINC00554-201ENST00000564841 RRP15Q9Y3B9 282 aaKnown RBP18.91■□□□□ 0.62
LINC00554-201ENST00000564841 GTF2A1P52655 376 aaPredicted RBP18.9■□□□□ 0.62
LINC00554-201ENST00000564841 CC2D1AQ6P1N0 951 aaPredicted RBP18.9■□□□□ 0.62
LINC00554-201ENST00000564841 ZCRB1Q8TBF4 217 aaKnown RBP18.9■□□□□ 0.62
LINC00554-201ENST00000564841 USP54Q70EL1 1684 aa18.9■□□□□ 0.62
LINC00554-201ENST00000564841 KDM6AO15550 1401 aaPredicted RBP18.9■□□□□ 0.62
LINC00554-201ENST00000564841 KIF1AQ12756 1690 aa18.9■□□□□ 0.62
LINC00554-201ENST00000564841 TRIM65Q6PJ69 517 aa18.9■□□□□ 0.62
LINC00554-201ENST00000564841 CLASRPQ8N2M8 674 aaKnown RBP18.9■□□□□ 0.62
LINC00554-201ENST00000564841 UBXN6Q9BZV1 441 aa18.9■□□□□ 0.62
LINC00554-201ENST00000564841 KIF2AO00139 706 aaPredicted RBP18.9■□□□□ 0.62
LINC00554-201ENST00000564841 POLA2Q14181 598 aa18.9■□□□□ 0.62
LINC00554-201ENST00000564841 SRLQ86TD4 932 aa18.9■□□□□ 0.62
LINC00554-201ENST00000564841 USP28Q96RU2 1077 aa18.9■□□□□ 0.62
LINC00554-201ENST00000564841 MYD88Q99836 296 aa18.9■□□□□ 0.62
LINC00554-201ENST00000564841 KSR2Q6VAB6 950 aa18.89■□□□□ 0.61
LINC00554-201ENST00000564841 DCAF5Q96JK2 942 aa18.89■□□□□ 0.61
LINC00554-201ENST00000564841 SEC62Q99442 399 aaKnown RBP18.89■□□□□ 0.61
LINC00554-201ENST00000564841 OSBPL5Q9H0X9 879 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms