RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 TAF5LO75529 589 aa17.11■□□□□ 0.33
CNOT1-206ENST00000564557 RPS12P25398 132 aaKnown RBP17.11■□□□□ 0.33
CNOT1-206ENST00000564557 RABL6Q3YEC7 729 aaPredicted RBP17.11■□□□□ 0.33
CNOT1-206ENST00000564557 ZKSCAN2Q63HK3 967 aa17.11■□□□□ 0.33
CNOT1-206ENST00000564557 DPF2Q92785 391 aa17.11■□□□□ 0.33
CNOT1-206ENST00000564557 KAZALD1Q96I82 304 aa17.11■□□□□ 0.33
CNOT1-206ENST00000564557 COA1Q9GZY4 146 aa17.11■□□□□ 0.33
CNOT1-206ENST00000564557 LTBP1Q14766 1721 aa17.1■□□□□ 0.33
CNOT1-206ENST00000564557 GNAI3P08754 354 aa17.1■□□□□ 0.33
CNOT1-206ENST00000564557 KCNQ5Q9NR82 932 aa17.1■□□□□ 0.33
CNOT1-206ENST00000564557 USP17L3A6NCW0 530 aa17.09■□□□□ 0.33
CNOT1-206ENST00000564557 USP17L4A6NCW7 530 aa17.09■□□□□ 0.33
CNOT1-206ENST00000564557 TRIM27P14373 513 aa17.09■□□□□ 0.33
CNOT1-206ENST00000564557 INTS3Q68E01 1043 aaKnown RBP17.09■□□□□ 0.33
CNOT1-206ENST00000564557 USP17L1Q7RTZ2 530 aa17.09■□□□□ 0.33
CNOT1-206ENST00000564557 MICALL2Q8IY33 904 aa17.09■□□□□ 0.33
CNOT1-206ENST00000564557 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
CNOT1-206ENST00000564557 ANKRD44Q8N8A2 993 aa17.09■□□□□ 0.33
CNOT1-206ENST00000564557 CLUAP1Q96AJ1 413 aa17.09■□□□□ 0.33
CNOT1-206ENST00000564557 MROH5Q6ZUA9 1318 aa17.08■□□□□ 0.32
CNOT1-206ENST00000564557 WTIPA6NIX2 430 aaPredicted RBP17.08■□□□□ 0.32
CNOT1-206ENST00000564557 VIL1P09327 827 aaKnown RBP17.08■□□□□ 0.32
CNOT1-206ENST00000564557 MAP1SQ66K74 1059 aaPredicted RBP17.08■□□□□ 0.32
CNOT1-206ENST00000564557 ZNF804AQ7Z570 1209 aa17.08■□□□□ 0.32
CNOT1-206ENST00000564557 CNTROBQ8N137 903 aa17.08■□□□□ 0.32
CNOT1-206ENST00000564557 METTL24Q5JXM2 366 aa17.07■□□□□ 0.32
CNOT1-206ENST00000564557 RBM26Q5T8P6 1007 aaKnown RBP17.07■□□□□ 0.32
CNOT1-206ENST00000564557 RSBN1LQ6PCB5 846 aaPredicted RBP17.07■□□□□ 0.32
CNOT1-206ENST00000564557 AGBL3Q8NEM8 1001 aa17.07■□□□□ 0.32
CNOT1-206ENST00000564557 LRRFIP2Q9Y608 721 aaKnown RBP17.07■□□□□ 0.32
CNOT1-206ENST00000564557 TXNRD3Q86VQ6 643 aa17.06■□□□□ 0.32
CNOT1-206ENST00000564557 MEIS3Q99687 375 aa17.06■□□□□ 0.32
CNOT1-206ENST00000564557 PUS3Q9BZE2 481 aaKnown RBP17.06■□□□□ 0.32
CNOT1-206ENST00000564557 SNAP23O00161 211 aa17.05■□□□□ 0.32
CNOT1-206ENST00000564557 UBE4AQ14139 1066 aa17.05■□□□□ 0.32
CNOT1-206ENST00000564557 STRIP1Q5VSL9 837 aa17.05■□□□□ 0.32
CNOT1-206ENST00000564557 TTLL5Q6EMB2 1281 aa17.05■□□□□ 0.32
CNOT1-206ENST00000564557 VPS37DQ86XT2 251 aa17.05■□□□□ 0.32
CNOT1-206ENST00000564557 ZC3H15Q8WU90 426 aaKnown RBP17.05■□□□□ 0.32
CNOT1-206ENST00000564557 CD209Q9NNX6 404 aa17.05■□□□□ 0.32
CNOT1-206ENST00000564557 RIPOR2Q9Y4F9 1068 aa17.05■□□□□ 0.32
CNOT1-206ENST00000564557 MYO3BQ8WXR4 1341 aa17.04■□□□□ 0.32
CNOT1-206ENST00000564557 USP17L8P0C7I0 530 aa17.04■□□□□ 0.32
CNOT1-206ENST00000564557 KLRK1P26718 216 aa17.04■□□□□ 0.32
CNOT1-206ENST00000564557 TBC1D10BQ4KMP7 808 aaPredicted RBP17.04■□□□□ 0.32
CNOT1-206ENST00000564557 LRRC24Q50LG9 513 aa17.04■□□□□ 0.32
CNOT1-206ENST00000564557 C15orf52Q6ZUT6 534 aaKnown RBP17.04■□□□□ 0.32
CNOT1-206ENST00000564557 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
CNOT1-206ENST00000564557 DZIP1LQ8IYY4 767 aaKnown RBP17.04■□□□□ 0.32
CNOT1-206ENST00000564557 OGFOD1Q8N543 542 aa17.04■□□□□ 0.32
CNOT1-206ENST00000564557 KLHDC4Q8TBB5 520 aa17.04■□□□□ 0.32
CNOT1-206ENST00000564557 ITGBL1O95965 494 aaPredicted RBP17.03■□□□□ 0.32
CNOT1-206ENST00000564557 GNAI2P04899 355 aa17.03■□□□□ 0.32
CNOT1-206ENST00000564557 MS4A1P11836 297 aa17.03■□□□□ 0.32
CNOT1-206ENST00000564557 GTF2IP78347 998 aa17.03■□□□□ 0.32
CNOT1-206ENST00000564557 HTRA3P83110 453 aa17.03■□□□□ 0.32
CNOT1-206ENST00000564557 TMEM57Q8N5G2 664 aa17.03■□□□□ 0.32
CNOT1-206ENST00000564557 TRPM4Q8TD43 1214 aa17.03■□□□□ 0.32
CNOT1-206ENST00000564557 TNNQ9UQP3 1299 aa17.03■□□□□ 0.32
CNOT1-206ENST00000564557 SHTN1A0MZ66 631 aa17.02■□□□□ 0.32
CNOT1-206ENST00000564557 EYA2O00167 538 aa17.02■□□□□ 0.32
CNOT1-206ENST00000564557 PDE8BO95263 885 aa17.02■□□□□ 0.32
CNOT1-206ENST00000564557 HIBADHP31937 336 aaKnown RBP17.02■□□□□ 0.32
CNOT1-206ENST00000564557 KIF4BQ2VIQ3 1234 aa17.02■□□□□ 0.32
CNOT1-206ENST00000564557 CAVIN4Q5BKX8 364 aa17.02■□□□□ 0.32
CNOT1-206ENST00000564557 ITPRIPQ8IWB1 547 aa17.02■□□□□ 0.32
CNOT1-206ENST00000564557 SIL1Q9H173 461 aa17.02■□□□□ 0.32
CNOT1-206ENST00000564557 CREBZFQ9NS37 354 aa17.02■□□□□ 0.32
CNOT1-206ENST00000564557 HDAC9Q9UKV0 1011 aa17.02■□□□□ 0.32
CNOT1-206ENST00000564557 SCN9AQ15858 1988 aa17.02■□□□□ 0.31
CNOT1-206ENST00000564557 PASKQ96RG2 1323 aa17.01■□□□□ 0.31
CNOT1-206ENST00000564557 TMEM88BA6NKF7 163 aa17.01■□□□□ 0.31
CNOT1-206ENST00000564557 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
CNOT1-206ENST00000564557 IFIT1P09914 478 aaKnown RBP17.01■□□□□ 0.31
CNOT1-206ENST00000564557 HIRAP54198 1017 aaPredicted RBP17.01■□□□□ 0.31
CNOT1-206ENST00000564557 PTPN12Q05209 780 aaKnown RBP17.01■□□□□ 0.31
CNOT1-206ENST00000564557 DACT2Q5SW24 774 aa17.01■□□□□ 0.31
CNOT1-206ENST00000564557 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
CNOT1-206ENST00000564557 DCPSQ96C86 337 aaKnown RBP17.01■□□□□ 0.31
CNOT1-206ENST00000564557 FBXO3Q9UK99 471 aa17.01■□□□□ 0.31
CNOT1-206ENST00000564557 SRGAP3O43295 1099 aa17■□□□□ 0.31
CNOT1-206ENST00000564557 RFX5P48382 616 aaPredicted RBP17■□□□□ 0.31
CNOT1-206ENST00000564557 MMP14P50281 582 aa17■□□□□ 0.31
CNOT1-206ENST00000564557 CEP126Q9P2H0 1117 aa17■□□□□ 0.31
CNOT1-206ENST00000564557 ADAMTSL1Q8N6G6 1762 aa17■□□□□ 0.31
CNOT1-206ENST00000564557 IL1R1P14778 569 aa16.99■□□□□ 0.31
CNOT1-206ENST00000564557 GYG1P46976 350 aa16.99■□□□□ 0.31
CNOT1-206ENST00000564557 PUM3Q15397 648 aaKnown RBP16.99■□□□□ 0.31
CNOT1-206ENST00000564557 KLRG1Q96E93 195 aa16.99■□□□□ 0.31
CNOT1-206ENST00000564557 MXD3Q9BW11 206 aa16.99■□□□□ 0.31
CNOT1-206ENST00000564557 MYOZ2Q9NPC6 264 aa16.99■□□□□ 0.31
CNOT1-206ENST00000564557 PGAP2Q9UHJ9 254 aa16.99■□□□□ 0.31
CNOT1-206ENST00000564557 RCAN3Q9UKA8 241 aa16.99■□□□□ 0.31
CNOT1-206ENST00000564557 SSUH2Q9Y2M2 353 aa16.99■□□□□ 0.31
CNOT1-206ENST00000564557 CIAO1O76071 339 aa16.98■□□□□ 0.31
CNOT1-206ENST00000564557 SASH1O94885 1247 aa16.98■□□□□ 0.31
CNOT1-206ENST00000564557 SLC5A1P13866 664 aa16.98■□□□□ 0.31
CNOT1-206ENST00000564557 IL15P40933 162 aaPredicted RBP16.98■□□□□ 0.31
CNOT1-206ENST00000564557 ZNF280AP59817 542 aaPredicted RBP16.98■□□□□ 0.31
CNOT1-206ENST00000564557 KIAA0825Q8IV33 1275 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms