RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 FZD1Q9UP38 647 aa20.8■□□□□ 0.92
RNF40-205ENST00000563909 DLG5Q8TDM6 1919 aa20.8■□□□□ 0.92
RNF40-205ENST00000563909 ATP5J2-PTCD1G3V325 749 aa20.79■□□□□ 0.92
RNF40-205ENST00000563909 CRHR2Q13324 411 aa20.79■□□□□ 0.92
RNF40-205ENST00000563909 NFE2L2Q16236 605 aa20.79■□□□□ 0.92
RNF40-205ENST00000563909 SLC4A8Q2Y0W8 1093 aa20.79■□□□□ 0.92
RNF40-205ENST00000563909 PODNQ7Z5L7 613 aa20.79■□□□□ 0.92
RNF40-205ENST00000563909 SEC31BQ9NQW1 1179 aa20.79■□□□□ 0.92
RNF40-205ENST00000563909 IRS4O14654 1257 aaPredicted RBP20.78■□□□□ 0.92
RNF40-205ENST00000563909 SASH1O94885 1247 aa20.78■□□□□ 0.92
RNF40-205ENST00000563909 SP3Q02447 781 aa20.78■□□□□ 0.92
RNF40-205ENST00000563909 MXD3Q9BW11 206 aa20.78■□□□□ 0.92
RNF40-205ENST00000563909 RBM27Q9P2N5 1060 aaKnown RBP20.78■□□□□ 0.92
RNF40-205ENST00000563909 ZBTB48P10074 688 aaPredicted RBP20.77■□□□□ 0.92
RNF40-205ENST00000563909 NBPF11Q86T75 865 aa20.77■□□□□ 0.92
RNF40-205ENST00000563909 ISCA1Q9BUE6 129 aa20.77■□□□□ 0.92
RNF40-205ENST00000563909 PSME4Q14997 1843 aa20.76■□□□□ 0.91
RNF40-205ENST00000563909 MYCP01106 439 aaPredicted RBP20.76■□□□□ 0.91
RNF40-205ENST00000563909 CAP1Q01518 475 aa20.76■□□□□ 0.91
RNF40-205ENST00000563909 SLC9C1Q4G0N8 1177 aa20.76■□□□□ 0.91
RNF40-205ENST00000563909 WNK4Q96J92 1243 aa20.76■□□□□ 0.91
RNF40-205ENST00000563909 DACT2Q5SW24 774 aa20.75■□□□□ 0.91
RNF40-205ENST00000563909 OTUD7BQ6GQQ9 843 aa20.75■□□□□ 0.91
RNF40-205ENST00000563909 APOBEC3FQ8IUX4 373 aaKnown RBP20.75■□□□□ 0.91
RNF40-205ENST00000563909 PLBD2Q8NHP8 589 aa20.75■□□□□ 0.91
RNF40-205ENST00000563909 FBXW7Q969H0 707 aa20.75■□□□□ 0.91
RNF40-205ENST00000563909 CLMNQ96JQ2 1002 aa20.75■□□□□ 0.91
RNF40-205ENST00000563909 ANKRD13DQ6ZTN6 518 aa20.74■□□□□ 0.91
RNF40-205ENST00000563909 PLEKHF1Q96S99 279 aa20.74■□□□□ 0.91
RNF40-205ENST00000563909 XDHP47989 1333 aa20.74■□□□□ 0.91
RNF40-205ENST00000563909 PTCH2Q9Y6C5 1203 aa20.73■□□□□ 0.91
RNF40-205ENST00000563909 WTIPA6NIX2 430 aaPredicted RBP20.72■□□□□ 0.91
RNF40-205ENST00000563909 DPF3Q92784 378 aa20.72■□□□□ 0.91
RNF40-205ENST00000563909 ATP2B4P23634 1241 aa20.71■□□□□ 0.91
RNF40-205ENST00000563909 ARHGEF6Q15052 776 aa20.71■□□□□ 0.91
RNF40-205ENST00000563909 PTPN18Q99952 460 aa20.71■□□□□ 0.91
RNF40-205ENST00000563909 DEFB129Q9H1M3 183 aa20.71■□□□□ 0.91
RNF40-205ENST00000563909 CHPF2Q9P2E5 772 aa20.71■□□□□ 0.91
RNF40-205ENST00000563909 MYO3BQ8WXR4 1341 aa20.71■□□□□ 0.91
RNF40-205ENST00000563909 PPP1R12BO60237 982 aaPredicted RBP20.7■□□□□ 0.9
RNF40-205ENST00000563909 MAP3K11Q16584 847 aa20.7■□□□□ 0.9
RNF40-205ENST00000563909 TRIM28Q13263 835 aaKnown RBP20.69■□□□□ 0.9
RNF40-205ENST00000563909 CCDC152Q4G0S7 254 aa20.69■□□□□ 0.9
RNF40-205ENST00000563909 STRIP1Q5VSL9 837 aa20.69■□□□□ 0.9
RNF40-205ENST00000563909 CCDC85AQ96PX6 553 aaPredicted RBP20.69■□□□□ 0.9
RNF40-205ENST00000563909 BABAM1Q9NWV8 329 aa20.69■□□□□ 0.9
RNF40-205ENST00000563909 HSP90B1P14625 803 aaKnown RBP20.68■□□□□ 0.9
RNF40-205ENST00000563909 MMP14P50281 582 aa20.68■□□□□ 0.9
RNF40-205ENST00000563909 MAPK8IP3Q9UPT6 1336 aa20.68■□□□□ 0.9
RNF40-205ENST00000563909 GJA5P36382 358 aa20.67■□□□□ 0.9
RNF40-205ENST00000563909 KIAA0825Q8IV33 1275 aa20.67■□□□□ 0.9
RNF40-205ENST00000563909 ANKRD18AQ8IVF6 992 aa20.67■□□□□ 0.9
RNF40-205ENST00000563909 ZBTB38Q8NAP3 1195 aaPredicted RBP20.67■□□□□ 0.9
RNF40-205ENST00000563909 SH3TC2Q8TF17 1288 aa20.67■□□□□ 0.9
RNF40-205ENST00000563909 ZBED3Q96IU2 234 aaPredicted RBP20.67■□□□□ 0.9
RNF40-205ENST00000563909 TESPA1A2RU30 521 aaPredicted RBP20.66■□□□□ 0.9
RNF40-205ENST00000563909 UNCXA6NJT0 531 aa20.66■□□□□ 0.9
RNF40-205ENST00000563909 KRT24Q2M2I5 525 aa20.66■□□□□ 0.9
RNF40-205ENST00000563909 COL1A1P02452 1464 aaPredicted RBP20.65■□□□□ 0.9
RNF40-205ENST00000563909 MED23Q9ULK4 1368 aa20.65■□□□□ 0.9
RNF40-205ENST00000563909 MNX1P50219 401 aaPredicted RBP20.65■□□□□ 0.9
RNF40-205ENST00000563909 SSC5DA1L4H1 1573 aa20.64■□□□□ 0.9
RNF40-205ENST00000563909 SUPT20HL1Q3ZLR7 823 aa20.64■□□□□ 0.89
RNF40-205ENST00000563909 TTLL5Q6EMB2 1281 aa20.64■□□□□ 0.89
RNF40-205ENST00000563909 COA1Q9GZY4 146 aa20.64■□□□□ 0.89
RNF40-205ENST00000563909 PRO3102Q9H379 93 aa20.64■□□□□ 0.89
RNF40-205ENST00000563909 IREB2P48200 963 aaKnown RBP20.63■□□□□ 0.89
RNF40-205ENST00000563909 RIPK4P57078 832 aa20.63■□□□□ 0.89
RNF40-205ENST00000563909 HDGFL1Q5TGJ6 251 aa20.63■□□□□ 0.89
RNF40-205ENST00000563909 JARID2Q92833 1246 aaPredicted RBP20.63■□□□□ 0.89
RNF40-205ENST00000563909 PNNQ9H307 717 aaKnown RBP20.63■□□□□ 0.89
RNF40-205ENST00000563909 LAMB1P07942 1786 aa20.63■□□□□ 0.89
RNF40-205ENST00000563909 LAMA3Q16787 3333 aa20.63■□□□□ 0.89
RNF40-205ENST00000563909 PDE8AO60658 829 aa20.62■□□□□ 0.89
RNF40-205ENST00000563909 USP2O75604 605 aaPredicted RBP20.62■□□□□ 0.89
RNF40-205ENST00000563909 DLGAP5Q15398 846 aa20.62■□□□□ 0.89
RNF40-205ENST00000563909 ZFYVE28Q9HCC9 887 aa20.62■□□□□ 0.89
RNF40-205ENST00000563909 DBF4Q9UBU7 674 aaPredicted RBP20.62■□□□□ 0.89
RNF40-205ENST00000563909 PPP2R3BQ9Y5P8 575 aa20.62■□□□□ 0.89
RNF40-205ENST00000563909 TAF1CQ15572 869 aaPredicted RBP20.61■□□□□ 0.89
RNF40-205ENST00000563909 NBPF12Q5TAG4 269 aaPredicted RBP20.61■□□□□ 0.89
RNF40-205ENST00000563909 TXNRD3Q86VQ6 643 aa20.61■□□□□ 0.89
RNF40-205ENST00000563909 ANKRD13AQ8IZ07 590 aa20.61■□□□□ 0.89
RNF40-205ENST00000563909 MINPP1Q9UNW1 487 aa20.61■□□□□ 0.89
RNF40-205ENST00000563909 ZNF646O15015 1829 aaPredicted RBP20.6■□□□□ 0.89
RNF40-205ENST00000563909 CCT4P50991 539 aaKnown RBP20.6■□□□□ 0.89
RNF40-205ENST00000563909 RALBP1Q15311 655 aa20.6■□□□□ 0.89
RNF40-205ENST00000563909 RIC3Q7Z5B4 369 aa20.6■□□□□ 0.89
RNF40-205ENST00000563909 OPTNQ96CV9 577 aa20.6■□□□□ 0.89
RNF40-205ENST00000563909 SHISA4Q96DD7 197 aa20.6■□□□□ 0.89
RNF40-205ENST00000563909 ELP3Q9H9T3 547 aa20.6■□□□□ 0.89
RNF40-205ENST00000563909 HYPKQ9NX55 129 aa20.6■□□□□ 0.89
RNF40-205ENST00000563909 SOX1O00570 391 aaPredicted RBP20.59■□□□□ 0.89
RNF40-205ENST00000563909 GTF2IP78347 998 aa20.59■□□□□ 0.89
RNF40-205ENST00000563909 LRCH3Q96II8 777 aa20.59■□□□□ 0.89
RNF40-205ENST00000563909 MS4A4AQ96JQ5 239 aa20.59■□□□□ 0.89
RNF40-205ENST00000563909 CDC5LQ99459 802 aaKnown RBP20.59■□□□□ 0.89
RNF40-205ENST00000563909 HTATIP2Q9BUP3 242 aa20.59■□□□□ 0.89
RNF40-205ENST00000563909 ARHGAP39Q9C0H5 1083 aa20.59■□□□□ 0.89
RNF40-205ENST00000563909 NR2E3Q9Y5X4 410 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms