RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 YBX3P16989 372 aaKnown RBP eCLIP33.2■■■□□ 2.91
SH3GL3-205ENST00000563901 ATP2B4P23634 1241 aa33.2■■■□□ 2.91
SH3GL3-205ENST00000563901 UBE4AQ14139 1066 aa33.2■■■□□ 2.91
SH3GL3-205ENST00000563901 CC2D2BQ6DHV5 1058 aa33.2■■■□□ 2.91
SH3GL3-205ENST00000563901 TXNRD3Q86VQ6 643 aa33.2■■■□□ 2.91
SH3GL3-205ENST00000563901 LPIN2Q92539 896 aa33.2■■■□□ 2.91
SH3GL3-205ENST00000563901 LEMD3Q9Y2U8 911 aa33.2■■■□□ 2.91
SH3GL3-205ENST00000563901 XAGE2Q96GT9 111 aa33.2■■■□□ 2.9
SH3GL3-205ENST00000563901 IFIT2P09913 472 aaKnown RBP33.19■■■□□ 2.9
SH3GL3-205ENST00000563901 SLC5A1P13866 664 aa33.19■■■□□ 2.9
SH3GL3-205ENST00000563901 IRS2Q9Y4H2 1338 aa33.18■■■□□ 2.9
SH3GL3-205ENST00000563901 SOGA3Q5TF21 947 aa33.17■■■□□ 2.9
SH3GL3-205ENST00000563901 TSHZ3Q63HK5 1081 aa33.17■■■□□ 2.9
SH3GL3-205ENST00000563901 RTKN2Q8IZC4 609 aa33.17■■■□□ 2.9
SH3GL3-205ENST00000563901 IFIT1P09914 478 aaKnown RBP33.17■■■□□ 2.9
SH3GL3-205ENST00000563901 CCDC88AQ3V6T2 1871 aa33.16■■■□□ 2.9
SH3GL3-205ENST00000563901 RIMBP2O15034 1052 aa33.16■■■□□ 2.9
SH3GL3-205ENST00000563901 GYG1P46976 350 aa33.16■■■□□ 2.9
SH3GL3-205ENST00000563901 NFKBIEO00221 500 aa33.15■■■□□ 2.9
SH3GL3-205ENST00000563901 RTFDC1Q9BY42 306 aaPredicted RBP33.15■■■□□ 2.9
SH3GL3-205ENST00000563901 UTRNP46939 3433 aa33.15■■■□□ 2.9
SH3GL3-205ENST00000563901 SALL3Q9BXA9 1300 aa33.14■■■□□ 2.9
SH3GL3-205ENST00000563901 RASSF7Q02833 373 aa33.13■■■□□ 2.89
SH3GL3-205ENST00000563901 BCAMP50895 628 aa33.13■■■□□ 2.89
SH3GL3-205ENST00000563901 FKBP4Q02790 459 aaKnown RBP eCLIP33.13■■■□□ 2.89
SH3GL3-205ENST00000563901 ZNF277Q9NRM2 450 aaPredicted RBP33.13■■■□□ 2.89
SH3GL3-205ENST00000563901 MED23Q9ULK4 1368 aa33.13■■■□□ 2.89
SH3GL3-205ENST00000563901 MYH13Q9UKX3 1938 aa33.12■■■□□ 2.89
SH3GL3-205ENST00000563901 PHKA1P46020 1223 aa33.12■■■□□ 2.89
SH3GL3-205ENST00000563901 FAM84BQ96KN1 310 aaPredicted RBP33.12■■■□□ 2.89
SH3GL3-205ENST00000563901 PSMD1Q99460 953 aa33.12■■■□□ 2.89
SH3GL3-205ENST00000563901 GRIPAP1Q4V328 841 aa33.11■■■□□ 2.89
SH3GL3-205ENST00000563901 GORABQ5T7V8 394 aa33.11■■■□□ 2.89
SH3GL3-205ENST00000563901 COL4A5P29400 1685 aa33.11■■■□□ 2.89
SH3GL3-205ENST00000563901 MX1P20591 662 aa33.1■■■□□ 2.89
SH3GL3-205ENST00000563901 RGS3P49796 1198 aa33.1■■■□□ 2.89
SH3GL3-205ENST00000563901 AOC3Q16853 763 aa33.1■■■□□ 2.89
SH3GL3-205ENST00000563901 WASHC4Q2M389 1173 aa33.1■■■□□ 2.89
SH3GL3-205ENST00000563901 ARHGAP27Q6ZUM4 889 aa33.1■■■□□ 2.89
SH3GL3-205ENST00000563901 PLEKHM2Q8IWE5 1019 aa33.1■■■□□ 2.89
SH3GL3-205ENST00000563901 TAOK3Q9H2K8 898 aa33.1■■■□□ 2.89
SH3GL3-205ENST00000563901 CHD4Q14839 1912 aa33.1■■■□□ 2.89
SH3GL3-205ENST00000563901 CCDC102BQ68D86 513 aa33.1■■■□□ 2.89
SH3GL3-205ENST00000563901 GPR162Q16538 588 aa33.09■■■□□ 2.89
SH3GL3-205ENST00000563901 IQSEC3Q9UPP2 1182 aaPredicted RBP33.09■■■□□ 2.89
SH3GL3-205ENST00000563901 SBF1O95248 1867 aa33.08■■■□□ 2.89
SH3GL3-205ENST00000563901 PRELPP51888 382 aa33.08■■■□□ 2.89
SH3GL3-205ENST00000563901 C15orf52Q6ZUT6 534 aaKnown RBP33.08■■■□□ 2.89
SH3GL3-205ENST00000563901 SUPT20HQ8NEM7 779 aa33.08■■■□□ 2.89
SH3GL3-205ENST00000563901 EYA3Q99504 573 aa33.08■■■□□ 2.89
SH3GL3-205ENST00000563901 ZC3H12CQ9C0D7 883 aaKnown RBP33.08■■■□□ 2.89
SH3GL3-205ENST00000563901 AKAP11Q9UKA4 1901 aa33.07■■■□□ 2.88
SH3GL3-205ENST00000563901 PDE1AP54750 535 aa33.07■■■□□ 2.88
SH3GL3-205ENST00000563901 DOK7Q18PE1 504 aa33.07■■■□□ 2.88
SH3GL3-205ENST00000563901 PPIP5K2O43314 1243 aa33.06■■■□□ 2.88
SH3GL3-205ENST00000563901 CAVIN4Q5BKX8 364 aa33.06■■■□□ 2.88
SH3GL3-205ENST00000563901 FBXO33Q7Z6M2 555 aa33.06■■■□□ 2.88
SH3GL3-205ENST00000563901 HIBADHP31937 336 aaKnown RBP33.06■■■□□ 2.88
SH3GL3-205ENST00000563901 SCARF1Q14162 830 aa33.05■■■□□ 2.88
SH3GL3-205ENST00000563901 TTC39AQ5SRH9 613 aa33.05■■■□□ 2.88
SH3GL3-205ENST00000563901 VPS37DQ86XT2 251 aa33.05■■■□□ 2.88
SH3GL3-205ENST00000563901 ECHDC1Q9NTX5 307 aa33.05■■■□□ 2.88
SH3GL3-205ENST00000563901 KIAA2012Q0VF49 1180 aa33.04■■■□□ 2.88
SH3GL3-205ENST00000563901 CCDC158Q5M9N0 1113 aa33.04■■■□□ 2.88
SH3GL3-205ENST00000563901 DBNDD1Q9H9R9 158 aa33.04■■■□□ 2.88
SH3GL3-205ENST00000563901 NDUFB9Q9Y6M9 179 aa33.04■■■□□ 2.88
SH3GL3-205ENST00000563901 COL1A1P02452 1464 aaPredicted RBP33.04■■■□□ 2.88
SH3GL3-205ENST00000563901 SCN9AQ15858 1988 aa33.04■■■□□ 2.88
SH3GL3-205ENST00000563901 IARSP41252 1262 aaKnown RBP33.03■■■□□ 2.88
SH3GL3-205ENST00000563901 ZNF804AQ7Z570 1209 aa33.03■■■□□ 2.88
SH3GL3-205ENST00000563901 PI4K2BQ8TCG2 481 aa33.03■■■□□ 2.88
SH3GL3-205ENST00000563901 STAP2Q9UGK3 403 aa33.03■■■□□ 2.88
SH3GL3-205ENST00000563901 LTBP3Q9NS15 1303 aa33.03■■■□□ 2.88
SH3GL3-205ENST00000563901 PI16Q6UXB8 463 aa33.02■■■□□ 2.88
SH3GL3-205ENST00000563901 GPATCH3Q96I76 525 aa33.02■■■□□ 2.88
SH3GL3-205ENST00000563901 CD209Q9NNX6 404 aa33.02■■■□□ 2.88
SH3GL3-205ENST00000563901 TTC41PQ6P2S7 1318 aa33.01■■■□□ 2.87
SH3GL3-205ENST00000563901 LARGE2Q8N3Y3 721 aa33.01■■■□□ 2.87
SH3GL3-205ENST00000563901 BOLA2Q9H3K6 86 aa33.01■■■□□ 2.87
SH3GL3-205ENST00000563901 ARID4AP29374 1257 aaPredicted RBP33■■■□□ 2.87
SH3GL3-205ENST00000563901 MCAMP43121 646 aa33■■■□□ 2.87
SH3GL3-205ENST00000563901 SNRKQ9NRH2 765 aa33■■■□□ 2.87
SH3GL3-205ENST00000563901 JAG2Q9Y219 1238 aa33■■■□□ 2.87
SH3GL3-205ENST00000563901 DICER1Q9UPY3 1922 aaKnown RBP33■■■□□ 2.87
SH3GL3-205ENST00000563901 MYO5AQ9Y4I1 1855 aaKnown RBP32.99■■■□□ 2.87
SH3GL3-205ENST00000563901 RASGRF1Q13972 1273 aa32.99■■■□□ 2.87
SH3GL3-205ENST00000563901 ZNF646O15015 1829 aaPredicted RBP32.99■■■□□ 2.87
SH3GL3-205ENST00000563901 ATP5JP18859 108 aa32.99■■■□□ 2.87
SH3GL3-205ENST00000563901 G3V3G9 751 aa32.98■■■□□ 2.87
SH3GL3-205ENST00000563901 ECE2O60344 883 aa32.98■■■□□ 2.87
SH3GL3-205ENST00000563901 MAP4K4O95819 1239 aaPredicted RBP32.98■■■□□ 2.87
SH3GL3-205ENST00000563901 DCAF8Q5TAQ9 597 aa32.98■■■□□ 2.87
SH3GL3-205ENST00000563901 COA1Q9GZY4 146 aa32.98■■■□□ 2.87
SH3GL3-205ENST00000563901 OSBPL3Q9H4L5 887 aa32.98■■■□□ 2.87
SH3GL3-205ENST00000563901 UQCRFS1P1P0C7P4 283 aa32.97■■■□□ 2.87
SH3GL3-205ENST00000563901 TDRD7Q8NHU6 1098 aaKnown RBP32.97■■■□□ 2.87
SH3GL3-205ENST00000563901 KCNQ5Q9NR82 932 aa32.97■■■□□ 2.87
SH3GL3-205ENST00000563901 IL1R1P14778 569 aa32.96■■■□□ 2.87
SH3GL3-205ENST00000563901 EDC3Q96F86 508 aaKnown RBP32.96■■■□□ 2.87
SH3GL3-205ENST00000563901 GNL3LQ9NVN8 582 aaKnown RBP32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms