RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 ECE2O60344 883 aa22.16■■□□□ 1.14
MAP1LC3B-204ENST00000563720 EGFRP00533 1210 aa22.16■■□□□ 1.14
MAP1LC3B-204ENST00000563720 RPS12P25398 132 aaKnown RBP22.16■■□□□ 1.14
MAP1LC3B-204ENST00000563720 DOK7Q18PE1 504 aa22.16■■□□□ 1.14
MAP1LC3B-204ENST00000563720 ZNF646O15015 1829 aaPredicted RBP22.15■■□□□ 1.14
MAP1LC3B-204ENST00000563720 CCER2I3L3R5 266 aa22.15■■□□□ 1.14
MAP1LC3B-204ENST00000563720 ZC3H12CQ9C0D7 883 aaKnown RBP22.15■■□□□ 1.14
MAP1LC3B-204ENST00000563720 KCNQ5Q9NR82 932 aa22.15■■□□□ 1.14
MAP1LC3B-204ENST00000563720 BSDC1Q9NW68 430 aaPredicted RBP22.15■■□□□ 1.14
MAP1LC3B-204ENST00000563720 E9PSI1 815 aa22.14■■□□□ 1.13
MAP1LC3B-204ENST00000563720 TRPA1O75762 1119 aa22.14■■□□□ 1.13
MAP1LC3B-204ENST00000563720 CSF1RP07333 972 aa22.14■■□□□ 1.13
MAP1LC3B-204ENST00000563720 RNF186Q9NXI6 227 aa22.14■■□□□ 1.13
MAP1LC3B-204ENST00000563720 SOX10P56693 466 aa22.13■■□□□ 1.13
MAP1LC3B-204ENST00000563720 KIF4BQ2VIQ3 1234 aa22.13■■□□□ 1.13
MAP1LC3B-204ENST00000563720 SULF1Q8IWU6 871 aa22.13■■□□□ 1.13
MAP1LC3B-204ENST00000563720 MINPP1Q9UNW1 487 aa22.13■■□□□ 1.13
MAP1LC3B-204ENST00000563720 ITGA6P23229 1130 aa22.12■■□□□ 1.13
MAP1LC3B-204ENST00000563720 ATP2B4P23634 1241 aa22.12■■□□□ 1.13
MAP1LC3B-204ENST00000563720 SLFN5Q08AF3 891 aa22.12■■□□□ 1.13
MAP1LC3B-204ENST00000563720 WTIPA6NIX2 430 aaPredicted RBP22.11■■□□□ 1.13
MAP1LC3B-204ENST00000563720 GGA3Q9NZ52 723 aa22.11■■□□□ 1.13
MAP1LC3B-204ENST00000563720 G3V3G9 751 aa22.1■■□□□ 1.13
MAP1LC3B-204ENST00000563720 SLC10A3P09131 477 aa22.1■■□□□ 1.13
MAP1LC3B-204ENST00000563720 IGHMBP2P38935 993 aaKnown RBP22.1■■□□□ 1.13
MAP1LC3B-204ENST00000563720 FOXO4P98177 505 aa22.1■■□□□ 1.13
MAP1LC3B-204ENST00000563720 DCAF8Q5TAQ9 597 aa22.1■■□□□ 1.13
MAP1LC3B-204ENST00000563720 MRPL50Q8N5N7 158 aaKnown RBP22.1■■□□□ 1.13
MAP1LC3B-204ENST00000563720 CDCA7LQ96GN5 454 aa22.1■■□□□ 1.13
MAP1LC3B-204ENST00000563720 CSRNP1Q96S65 589 aa22.09■■□□□ 1.13
MAP1LC3B-204ENST00000563720 MED23Q9ULK4 1368 aa22.09■■□□□ 1.13
MAP1LC3B-204ENST00000563720 GRM8O00222 908 aa22.08■■□□□ 1.13
MAP1LC3B-204ENST00000563720 ALDH1L1O75891 902 aa22.08■■□□□ 1.13
MAP1LC3B-204ENST00000563720 VIL1P09327 827 aaKnown RBP22.08■■□□□ 1.13
MAP1LC3B-204ENST00000563720 SLC4A10Q6U841 1118 aa22.08■■□□□ 1.13
MAP1LC3B-204ENST00000563720 ZNF609O15014 1411 aa22.07■■□□□ 1.12
MAP1LC3B-204ENST00000563720 CCT4P50991 539 aaKnown RBP22.07■■□□□ 1.12
MAP1LC3B-204ENST00000563720 EPHA10Q5JZY3 1008 aa22.07■■□□□ 1.12
MAP1LC3B-204ENST00000563720 CTU1Q7Z7A3 348 aaKnown RBP22.07■■□□□ 1.12
MAP1LC3B-204ENST00000563720 CDCA5Q96FF9 252 aa22.07■■□□□ 1.12
MAP1LC3B-204ENST00000563720 ANKRD18BA2A2Z9 1011 aa22.06■■□□□ 1.12
MAP1LC3B-204ENST00000563720 REM2Q8IYK8 340 aaPredicted RBP22.06■■□□□ 1.12
MAP1LC3B-204ENST00000563720 TRMT2AQ8IZ69 625 aaKnown RBP22.06■■□□□ 1.12
MAP1LC3B-204ENST00000563720 SSH1Q8WYL5 1049 aa22.06■■□□□ 1.12
MAP1LC3B-204ENST00000563720 MPHOSPH8Q99549 860 aa22.06■■□□□ 1.12
MAP1LC3B-204ENST00000563720 SRCIN1Q9C0H9 1055 aa22.06■■□□□ 1.12
MAP1LC3B-204ENST00000563720 ASTN2O75129 1339 aaPredicted RBP22.06■■□□□ 1.12
MAP1LC3B-204ENST00000563720 C9orf78Q9NZ63 289 aaPredicted RBP22.05■■□□□ 1.12
MAP1LC3B-204ENST00000563720 LEMD3Q9Y2U8 911 aa22.05■■□□□ 1.12
MAP1LC3B-204ENST00000563720 AKAP11Q9UKA4 1901 aa22.04■■□□□ 1.12
MAP1LC3B-204ENST00000563720 IFIT5Q13325 482 aaKnown RBP22.04■■□□□ 1.12
MAP1LC3B-204ENST00000563720 ANGEL2Q5VTE6 544 aaKnown RBP22.04■■□□□ 1.12
MAP1LC3B-204ENST00000563720 LMBR1LQ6UX01 489 aa22.04■■□□□ 1.12
MAP1LC3B-204ENST00000563720 PODNQ7Z5L7 613 aa22.04■■□□□ 1.12
MAP1LC3B-204ENST00000563720 RASAL3Q86YV0 1011 aa22.04■■□□□ 1.12
MAP1LC3B-204ENST00000563720 ANKRD2Q9GZV1 360 aa22.04■■□□□ 1.12
MAP1LC3B-204ENST00000563720 TNRC18O15417 2968 aaPredicted RBP22.04■■□□□ 1.12
MAP1LC3B-204ENST00000563720 PTPRCP08575 1304 aa22.04■■□□□ 1.12
MAP1LC3B-204ENST00000563720 CHRNDQ07001 517 aa22.03■■□□□ 1.12
MAP1LC3B-204ENST00000563720 SCARF1Q14162 830 aa22.03■■□□□ 1.12
MAP1LC3B-204ENST00000563720 RSBN1LQ6PCB5 846 aaPredicted RBP22.03■■□□□ 1.12
MAP1LC3B-204ENST00000563720 TXNRD3Q86VQ6 643 aa22.03■■□□□ 1.12
MAP1LC3B-204ENST00000563720 CHMP3Q9Y3E7 222 aa22.03■■□□□ 1.12
MAP1LC3B-204ENST00000563720 ZNF804BA4D1E1 1349 aa22.03■■□□□ 1.12
MAP1LC3B-204ENST00000563720 AGBL3Q8NEM8 1001 aa22.02■■□□□ 1.12
MAP1LC3B-204ENST00000563720 PDE4DIPQ5VU43 2346 aa22.02■■□□□ 1.12
MAP1LC3B-204ENST00000563720 UTYO14607 1347 aa22.02■■□□□ 1.12
MAP1LC3B-204ENST00000563720 USP17L3A6NCW0 530 aa22.01■■□□□ 1.11
MAP1LC3B-204ENST00000563720 USP17L4A6NCW7 530 aa22.01■■□□□ 1.11
MAP1LC3B-204ENST00000563720 NBPF7P0C2Y1 421 aaPredicted RBP22.01■■□□□ 1.11
MAP1LC3B-204ENST00000563720 KLRK1P26718 216 aa22.01■■□□□ 1.11
MAP1LC3B-204ENST00000563720 ZNF280AP59817 542 aaPredicted RBP22.01■■□□□ 1.11
MAP1LC3B-204ENST00000563720 FKBP1BP68106 108 aa22.01■■□□□ 1.11
MAP1LC3B-204ENST00000563720 ALDH1L2Q3SY69 923 aa22.01■■□□□ 1.11
MAP1LC3B-204ENST00000563720 USP17L1Q7RTZ2 530 aa22.01■■□□□ 1.11
MAP1LC3B-204ENST00000563720 KAZALD1Q96I82 304 aa22.01■■□□□ 1.11
MAP1LC3B-204ENST00000563720 GMLQ99445 158 aa22.01■■□□□ 1.11
MAP1LC3B-204ENST00000563720 PRPF38BQ5VTL8 546 aaKnown RBP22■■□□□ 1.11
MAP1LC3B-204ENST00000563720 SUCLG2Q96I99 432 aa22■■□□□ 1.11
MAP1LC3B-204ENST00000563720 COA1Q9GZY4 146 aa22■■□□□ 1.11
MAP1LC3B-204ENST00000563720 HDAC9Q9UKV0 1011 aa22■■□□□ 1.11
MAP1LC3B-204ENST00000563720 HPS5Q9UPZ3 1129 aa22■■□□□ 1.11
MAP1LC3B-204ENST00000563720 CCDC57Q2TAC2 916 aa21.99■■□□□ 1.11
MAP1LC3B-204ENST00000563720 ZNF594Q96JF6 807 aaPredicted RBP21.99■■□□□ 1.11
MAP1LC3B-204ENST00000563720 IRS2Q9Y4H2 1338 aa21.99■■□□□ 1.11
MAP1LC3B-204ENST00000563720 TAF5LO75529 589 aa21.98■■□□□ 1.11
MAP1LC3B-204ENST00000563720 PKN2Q16513 984 aaKnown RBP21.98■■□□□ 1.11
MAP1LC3B-204ENST00000563720 DACT2Q5SW24 774 aa21.98■■□□□ 1.11
MAP1LC3B-204ENST00000563720 MYOZ2Q9NPC6 264 aa21.98■■□□□ 1.11
MAP1LC3B-204ENST00000563720 SNAP23O00161 211 aa21.97■■□□□ 1.11
MAP1LC3B-204ENST00000563720 USP17L8P0C7I0 530 aa21.97■■□□□ 1.11
MAP1LC3B-204ENST00000563720 KCNJ4P48050 445 aa21.97■■□□□ 1.11
MAP1LC3B-204ENST00000563720 HELBQ8NG08 1087 aaPredicted RBP21.97■■□□□ 1.11
MAP1LC3B-204ENST00000563720 MXD3Q9BW11 206 aa21.97■■□□□ 1.11
MAP1LC3B-204ENST00000563720 PITPNM2Q9BZ72 1349 aa21.97■■□□□ 1.11
MAP1LC3B-204ENST00000563720 TBC1D8O95759 1140 aa21.96■■□□□ 1.11
MAP1LC3B-204ENST00000563720 CT47B1P0C2W7 299 aaPredicted RBP21.96■■□□□ 1.11
MAP1LC3B-204ENST00000563720 MOB2Q70IA6 237 aa21.96■■□□□ 1.11
MAP1LC3B-204ENST00000563720 SMC4Q9NTJ3 1288 aa21.96■■□□□ 1.11
MAP1LC3B-204ENST00000563720 PAPPA2Q9BXP8 1791 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms