RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 SLC27A2O14975 620 aa14.78□□□□□ -0.04
CCDC187-201ENST00000563590 GNG11P61952 73 aa14.78□□□□□ -0.04
CCDC187-201ENST00000563590 NMIQ13287 307 aaPredicted RBP14.78□□□□□ -0.04
CCDC187-201ENST00000563590 RBM43Q6ZSC3 357 aaKnown RBP14.78□□□□□ -0.04
CCDC187-201ENST00000563590 UBE3BQ7Z3V4 1068 aa14.78□□□□□ -0.04
CCDC187-201ENST00000563590 FLT4P35916 1363 aa14.78□□□□□ -0.04
CCDC187-201ENST00000563590 CCDC102AQ96A19 550 aa14.78□□□□□ -0.04
CCDC187-201ENST00000563590 UTP14AQ9BVJ6 771 aaKnown RBP14.78□□□□□ -0.04
CCDC187-201ENST00000563590 ZBTB3Q9H5J0 574 aa14.78□□□□□ -0.04
CCDC187-201ENST00000563590 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.78□□□□□ -0.04
CCDC187-201ENST00000563590 A0A1B0GVL5 298 aa14.77□□□□□ -0.04
CCDC187-201ENST00000563590 STK38Q15208 465 aa14.77□□□□□ -0.04
CCDC187-201ENST00000563590 PLEKHO1Q53GL0 409 aaPredicted RBP14.77□□□□□ -0.04
CCDC187-201ENST00000563590 HSP90AB4PQ58FF6 505 aa14.77□□□□□ -0.04
CCDC187-201ENST00000563590 NFATC2IPQ8NCF5 419 aa14.77□□□□□ -0.04
CCDC187-201ENST00000563590 KCNB2Q92953 911 aa14.77□□□□□ -0.04
CCDC187-201ENST00000563590 KIF2AO00139 706 aaPredicted RBP14.77□□□□□ -0.05
CCDC187-201ENST00000563590 CHGBP05060 677 aa14.77□□□□□ -0.05
CCDC187-201ENST00000563590 APPP05067 770 aa14.77□□□□□ -0.05
CCDC187-201ENST00000563590 FKBP4Q02790 459 aaKnown RBP eCLIP14.77□□□□□ -0.05
CCDC187-201ENST00000563590 SLFNL1Q499Z3 407 aa14.77□□□□□ -0.05
CCDC187-201ENST00000563590 DDX46Q7L014 1031 aaKnown RBP14.77□□□□□ -0.05
CCDC187-201ENST00000563590 SMARCE1Q969G3 411 aa14.77□□□□□ -0.05
CCDC187-201ENST00000563590 FEZ2Q9UHY8 353 aaPredicted RBP14.77□□□□□ -0.05
CCDC187-201ENST00000563590 POLR3DP05423 398 aaPredicted RBP14.76□□□□□ -0.05
CCDC187-201ENST00000563590 XPO4Q9C0E2 1151 aaKnown RBP14.76□□□□□ -0.05
CCDC187-201ENST00000563590 RNF216Q9NWF9 866 aaPredicted RBP14.76□□□□□ -0.05
CCDC187-201ENST00000563590 ZNF446Q9NWS9 450 aa14.76□□□□□ -0.05
CCDC187-201ENST00000563590 VPS18Q9P253 973 aa14.76□□□□□ -0.05
CCDC187-201ENST00000563590 TULP1O00294 542 aaPredicted RBP14.76□□□□□ -0.05
CCDC187-201ENST00000563590 ATP2B1P20020 1258 aa14.76□□□□□ -0.05
CCDC187-201ENST00000563590 WASHC4Q2M389 1173 aa14.76□□□□□ -0.05
CCDC187-201ENST00000563590 CEP170BQ9Y4F5 1589 aaPredicted RBP14.76□□□□□ -0.05
CCDC187-201ENST00000563590 IBSPP21815 317 aaPredicted RBP14.76□□□□□ -0.05
CCDC187-201ENST00000563590 CCDC129Q6ZRS4 1044 aa14.76□□□□□ -0.05
CCDC187-201ENST00000563590 DRC1Q96MC2 740 aa14.76□□□□□ -0.05
CCDC187-201ENST00000563590 USP42Q9H9J4 1324 aaKnown RBP14.76□□□□□ -0.05
CCDC187-201ENST00000563590 GSDMDP57764 484 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 SMC1AQ14683 1233 aaKnown RBP14.75□□□□□ -0.05
CCDC187-201ENST00000563590 MAP4K1Q92918 833 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 IGSF1Q8N6C5 1336 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 KDM4FA0A1W2PPD8 638 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 TOB2Q14106 344 aaPredicted RBP14.75□□□□□ -0.05
CCDC187-201ENST00000563590 IQCB1Q15051 598 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 NOM1Q5C9Z4 860 aaKnown RBP14.75□□□□□ -0.05
CCDC187-201ENST00000563590 BEND3Q5T5X7 828 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 EVI5LQ96CN4 794 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 PPP1R13BQ96KQ4 1090 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 ARFGAP3Q9NP61 516 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 A0A0D9SFI3 127 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 CYP2C19P33261 490 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 HAND2P61296 217 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 COPS6Q7L5N1 327 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 PLEKHA4Q9H4M7 779 aa14.75□□□□□ -0.05
CCDC187-201ENST00000563590 KDRP35968 1356 aa14.74□□□□□ -0.05
CCDC187-201ENST00000563590 KARSQ15046 597 aaKnown RBP14.74□□□□□ -0.05
CCDC187-201ENST00000563590 ANKRD1Q15327 319 aa14.74□□□□□ -0.05
CCDC187-201ENST00000563590 HSP90B2PQ58FF3 399 aa14.74□□□□□ -0.05
CCDC187-201ENST00000563590 FAM208AQ9UK61 1670 aaKnown RBP14.74□□□□□ -0.05
CCDC187-201ENST00000563590 ADAMTS2O95450 1211 aa14.74□□□□□ -0.05
CCDC187-201ENST00000563590 RPS6KB1P23443 525 aa14.74□□□□□ -0.05
CCDC187-201ENST00000563590 CDC25BP30305 580 aa14.74□□□□□ -0.05
CCDC187-201ENST00000563590 NYAP1Q6ZVC0 841 aa14.74□□□□□ -0.05
CCDC187-201ENST00000563590 SLAIN2Q9P270 581 aa14.74□□□□□ -0.05
CCDC187-201ENST00000563590 PUF60Q9UHX1 559 aaKnown RBP14.74□□□□□ -0.05
CCDC187-201ENST00000563590 RGPD1P0DJD0 1748 aa14.74□□□□□ -0.05
CCDC187-201ENST00000563590 ITSN1Q15811 1721 aa14.74□□□□□ -0.05
CCDC187-201ENST00000563590 IP6K1Q92551 441 aa14.74□□□□□ -0.05
CCDC187-201ENST00000563590 PXDNLA1KZ92 1463 aa14.74□□□□□ -0.05
CCDC187-201ENST00000563590 CASQ1P31415 396 aa14.73□□□□□ -0.05
CCDC187-201ENST00000563590 OTUD7BQ6GQQ9 843 aa14.73□□□□□ -0.05
CCDC187-201ENST00000563590 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.73□□□□□ -0.05
CCDC187-201ENST00000563590 USP31Q70CQ4 1352 aa14.73□□□□□ -0.05
CCDC187-201ENST00000563590 AKAP12Q02952 1782 aa14.73□□□□□ -0.05
CCDC187-201ENST00000563590 XAGE3Q8WTP9 111 aa14.73□□□□□ -0.05
CCDC187-201ENST00000563590 RABEP2Q9H5N1 569 aa14.73□□□□□ -0.05
CCDC187-201ENST00000563590 SETD1AO15047 1707 aaKnown RBP14.73□□□□□ -0.05
CCDC187-201ENST00000563590 MYO1CO00159 1063 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 CCZ1BP86790 482 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 CCZ1P86791 482 aaPredicted RBP14.72□□□□□ -0.05
CCDC187-201ENST00000563590 MRFAP1L1Q96HT8 127 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 SBNO1A3KN83 1393 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 FAM193AP78312 1265 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 RESTQ13127 1097 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 Q6ZUG5 572 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 CCDC82Q8N4S0 544 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 NCOA5Q9HCD5 579 aaKnown RBP14.72□□□□□ -0.05
CCDC187-201ENST00000563590 UBR1Q8IWV7 1749 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 ERBB3P21860 1342 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 DDX58O95786 925 aaKnown RBP14.72□□□□□ -0.05
CCDC187-201ENST00000563590 TATP17735 454 aaPredicted RBP14.72□□□□□ -0.05
CCDC187-201ENST00000563590 PLA2G4AP47712 749 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 SARM1Q6SZW1 724 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 CPLX3Q8WVH0 158 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.72□□□□□ -0.05
CCDC187-201ENST00000563590 MTMR7Q9Y216 660 aa14.72□□□□□ -0.05
CCDC187-201ENST00000563590 TLR7Q9NYK1 1049 aaKnown RBP14.71□□□□□ -0.05
CCDC187-201ENST00000563590 TECPR2O15040 1411 aa14.71□□□□□ -0.05
CCDC187-201ENST00000563590 GPTP24298 496 aa14.71□□□□□ -0.05
CCDC187-201ENST00000563590 SYNE3Q6ZMZ3 975 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms