RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 WFDC8Q8IUA0 241 aa6.87□□□□□ -1.31
CDR2-203ENST00000563573 DMRTC2Q8IXT2 367 aaPredicted RBP6.87□□□□□ -1.31
CDR2-203ENST00000563573 FMR1NBQ8N0W7 255 aaPredicted RBP6.87□□□□□ -1.31
CDR2-203ENST00000563573 LPIN3Q9BQK8 851 aa6.87□□□□□ -1.31
CDR2-203ENST00000563573 RBSNQ9H1K0 784 aa6.87□□□□□ -1.31
CDR2-203ENST00000563573 PTPN23Q9H3S7 1636 aa6.87□□□□□ -1.31
CDR2-203ENST00000563573 FGD6Q6ZV73 1430 aa6.86□□□□□ -1.31
CDR2-203ENST00000563573 H2AFB1P0C5Y9 115 aa6.86□□□□□ -1.31
CDR2-203ENST00000563573 H2AFB2P0C5Z0 115 aa6.86□□□□□ -1.31
CDR2-203ENST00000563573 SELPP16109 830 aa6.86□□□□□ -1.31
CDR2-203ENST00000563573 ITGAEP38570 1179 aa6.86□□□□□ -1.31
CDR2-203ENST00000563573 MBTPS1Q14703 1052 aa6.86□□□□□ -1.31
CDR2-203ENST00000563573 PERM1Q5SV97 790 aa6.86□□□□□ -1.31
CDR2-203ENST00000563573 EFCAB2Q5VUJ9 269 aa6.86□□□□□ -1.31
CDR2-203ENST00000563573 CMTR1Q8N1G2 835 aaKnown RBP6.86□□□□□ -1.31
CDR2-203ENST00000563573 CACTIN-AS1Q8N1I8 211 aa6.86□□□□□ -1.31
CDR2-203ENST00000563573 DCAF11Q8TEB1 546 aa6.86□□□□□ -1.31
CDR2-203ENST00000563573 PRIMPOLQ96LW4 560 aa6.86□□□□□ -1.31
CDR2-203ENST00000563573 MAPKBP1O60336 1514 aa6.86□□□□□ -1.31
CDR2-203ENST00000563573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.86□□□□□ -1.31
CDR2-203ENST00000563573 CDC42BPBQ9Y5S2 1711 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 ZBTB42B2RXF5 422 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 PRMT3O60678 531 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 SOX18P35713 384 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 GRIK5Q16478 980 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 OCLNQ16625 522 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 XP32Q5T750 250 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 FBXO11Q86XK2 927 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 RGL4Q8IZJ4 473 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 Q8N3U1 123 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 USP21Q9UK80 565 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 TIMELESSQ9UNS1 1208 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 GPATCH8Q9UKJ3 1502 aaKnown RBP6.85□□□□□ -1.31
CDR2-203ENST00000563573 ABCC10Q5T3U5 1492 aa6.85□□□□□ -1.31
CDR2-203ENST00000563573 ABCA9Q8IUA7 1624 aa6.84□□□□□ -1.31
CDR2-203ENST00000563573 LOC102724428A0A0B4J2F2 783 aa6.84□□□□□ -1.31
CDR2-203ENST00000563573 DYRK3O43781 588 aa6.84□□□□□ -1.31
CDR2-203ENST00000563573 GHRHP01286 108 aa6.84□□□□□ -1.31
CDR2-203ENST00000563573 TSPY4P0CV99 314 aa6.84□□□□□ -1.31
CDR2-203ENST00000563573 TSPY10P0CW01 314 aa6.84□□□□□ -1.31
CDR2-203ENST00000563573 HOXD8P13378 290 aaPredicted RBP6.84□□□□□ -1.31
CDR2-203ENST00000563573 SIK1P57059 783 aa6.84□□□□□ -1.31
CDR2-203ENST00000563573 FAM69CQ0P6D2 419 aa6.84□□□□□ -1.31
CDR2-203ENST00000563573 PIK3R5Q8WYR1 880 aa6.84□□□□□ -1.31
CDR2-203ENST00000563573 ZMYND15Q9H091 742 aa6.84□□□□□ -1.31
CDR2-203ENST00000563573 SRA1Q9HD15 236 aaKnown RBP6.84□□□□□ -1.31
CDR2-203ENST00000563573 CXXC1Q9P0U4 656 aaPredicted RBP6.84□□□□□ -1.31
CDR2-203ENST00000563573 ZMIZ1Q9ULJ6 1067 aa6.84□□□□□ -1.31
CDR2-203ENST00000563573 FNDC3AQ9Y2H6 1198 aaKnown RBP6.84□□□□□ -1.31
CDR2-203ENST00000563573 PLCH2O75038 1416 aa6.84□□□□□ -1.32
CDR2-203ENST00000563573 PREX2Q70Z35 1606 aa6.83□□□□□ -1.32
CDR2-203ENST00000563573 ARHGAP5Q13017 1502 aa6.83□□□□□ -1.32
CDR2-203ENST00000563573 EIF2AK2P19525 551 aaKnown RBP6.83□□□□□ -1.32
CDR2-203ENST00000563573 SRPK2P78362 688 aaKnown RBP6.83□□□□□ -1.32
CDR2-203ENST00000563573 MLLT1Q03111 559 aaPredicted RBP6.83□□□□□ -1.32
CDR2-203ENST00000563573 ZMYM1Q5SVZ6 1142 aa6.83□□□□□ -1.32
CDR2-203ENST00000563573 IGF2-ASQ6U949 168 aa6.83□□□□□ -1.32
CDR2-203ENST00000563573 NLRP13Q86W25 1043 aa6.83□□□□□ -1.32
CDR2-203ENST00000563573 CCDC97Q96F63 343 aaPredicted RBP6.83□□□□□ -1.32
CDR2-203ENST00000563573 SMG9Q9H0W8 520 aaKnown RBP6.83□□□□□ -1.32
CDR2-203ENST00000563573 SERPINA10Q9UK55 444 aa6.83□□□□□ -1.32
CDR2-203ENST00000563573 CD109Q6YHK3 1445 aa6.83□□□□□ -1.32
CDR2-203ENST00000563573 TTC37Q6PGP7 1564 aa6.82□□□□□ -1.32
CDR2-203ENST00000563573 TCOF1Q13428 1488 aaKnown RBP6.82□□□□□ -1.32
CDR2-203ENST00000563573 MAP4K3Q8IVH8 894 aa6.82□□□□□ -1.32
CDR2-203ENST00000563573 CLP1Q92989 425 aaKnown RBP6.82□□□□□ -1.32
CDR2-203ENST00000563573 PBXIP1Q96AQ6 731 aa6.82□□□□□ -1.32
CDR2-203ENST00000563573 KCNMB2Q9Y691 235 aa6.82□□□□□ -1.32
CDR2-203ENST00000563573 GLI2P10070 1586 aa6.82□□□□□ -1.32
CDR2-203ENST00000563573 CFAP74Q9C0B2 1584 aa6.82□□□□□ -1.32
CDR2-203ENST00000563573 ARAP3Q8WWN8 1544 aa6.81□□□□□ -1.32
CDR2-203ENST00000563573 ZNF644Q9H582 1327 aaPredicted RBP6.81□□□□□ -1.32
CDR2-203ENST00000563573 PLEKHH2Q8IVE3 1493 aa6.81□□□□□ -1.32
CDR2-203ENST00000563573 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.81□□□□□ -1.32
CDR2-203ENST00000563573 MMP20O60882 483 aa6.81□□□□□ -1.32
CDR2-203ENST00000563573 ITGB7P26010 798 aa6.81□□□□□ -1.32
CDR2-203ENST00000563573 HNRNPMP52272 730 aaKnown RBP eCLIP6.81□□□□□ -1.323e-6■■□□□ 13.8
CDR2-203ENST00000563573 SHISA2Q6UWI4 295 aa6.81□□□□□ -1.32
CDR2-203ENST00000563573 C14orf37Q86TY3 774 aa6.81□□□□□ -1.32
CDR2-203ENST00000563573 ETFBKMTQ8IXQ9 262 aa6.81□□□□□ -1.32
CDR2-203ENST00000563573 STK32AQ8WU08 396 aa6.81□□□□□ -1.32
CDR2-203ENST00000563573 PLD4Q96BZ4 506 aa6.81□□□□□ -1.32
CDR2-203ENST00000563573 MUC3BQ9H195 1237 aa6.81□□□□□ -1.32
CDR2-203ENST00000563573 USP20Q9Y2K6 914 aa6.81□□□□□ -1.32
CDR2-203ENST00000563573 CAMSAP2Q08AD1 1489 aa6.8□□□□□ -1.32
CDR2-203ENST00000563573 UBAP1LF5GYI3 381 aa6.8□□□□□ -1.32
CDR2-203ENST00000563573 TSPOAP1O95153 1857 aa6.8□□□□□ -1.32
CDR2-203ENST00000563573 TMEM164Q5U3C3 297 aa6.8□□□□□ -1.32
CDR2-203ENST00000563573 HFE2Q6ZVN8 426 aa6.8□□□□□ -1.32
CDR2-203ENST00000563573 ABTB2Q8N961 1025 aa6.8□□□□□ -1.32
CDR2-203ENST00000563573 TP53INP1Q96A56 240 aa6.8□□□□□ -1.32
CDR2-203ENST00000563573 SAP130Q9H0E3 1048 aa6.8□□□□□ -1.32
CDR2-203ENST00000563573 KIF13AQ9H1H9 1805 aa6.79□□□□□ -1.32
CDR2-203ENST00000563573 RPLP1P05386 114 aaKnown RBP6.79□□□□□ -1.32
CDR2-203ENST00000563573 WFDC12Q8WWY7 111 aa6.79□□□□□ -1.32
CDR2-203ENST00000563573 SPACA7Q96KW9 195 aa6.79□□□□□ -1.32
CDR2-203ENST00000563573 STIM2Q9P246 746 aa6.79□□□□□ -1.32
CDR2-203ENST00000563573 DNMT1P26358 1616 aaKnown RBP6.79□□□□□ -1.32
CDR2-203ENST00000563573 MAP3K4Q9Y6R4 1608 aa6.79□□□□□ -1.32
CDR2-203ENST00000563573 FANCAO15360 1455 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms