RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 CNOT7Q9UIV1 285 aaKnown RBP18.65■□□□□ 0.58
RPUSD1-204ENST00000563560 MAP1SQ66K74 1059 aaPredicted RBP18.64■□□□□ 0.57
RPUSD1-204ENST00000563560 LDHAL6AQ6ZMR3 332 aa18.64■□□□□ 0.57
RPUSD1-204ENST00000563560 MICALL2Q8IY33 904 aa18.64■□□□□ 0.57
RPUSD1-204ENST00000563560 CHMP3Q9Y3E7 222 aa18.64■□□□□ 0.57
RPUSD1-204ENST00000563560 ZNF280AP59817 542 aaPredicted RBP18.63■□□□□ 0.57
RPUSD1-204ENST00000563560 DACT2Q5SW24 774 aa18.63■□□□□ 0.57
RPUSD1-204ENST00000563560 RSBN1LQ6PCB5 846 aaPredicted RBP18.63■□□□□ 0.57
RPUSD1-204ENST00000563560 ATF7IPQ6VMQ6 1270 aa18.63■□□□□ 0.57
RPUSD1-204ENST00000563560 CNTROBQ8N137 903 aa18.63■□□□□ 0.57
RPUSD1-204ENST00000563560 MEIS3Q99687 375 aa18.63■□□□□ 0.57
RPUSD1-204ENST00000563560 COA1Q9GZY4 146 aa18.63■□□□□ 0.57
RPUSD1-204ENST00000563560 LRRC24Q50LG9 513 aa18.62■□□□□ 0.57
RPUSD1-204ENST00000563560 KLHDC4Q8TBB5 520 aa18.62■□□□□ 0.57
RPUSD1-204ENST00000563560 ECM29Q5VYK3 1845 aa18.62■□□□□ 0.57
RPUSD1-204ENST00000563560 USP17L3A6NCW0 530 aa18.61■□□□□ 0.57
RPUSD1-204ENST00000563560 USP17L4A6NCW7 530 aa18.61■□□□□ 0.57
RPUSD1-204ENST00000563560 PTPN12Q05209 780 aaKnown RBP18.61■□□□□ 0.57
RPUSD1-204ENST00000563560 FMR1Q06787 632 aaKnown RBP eCLIP18.61■□□□□ 0.57
RPUSD1-204ENST00000563560 USP17L1Q7RTZ2 530 aa18.61■□□□□ 0.57
RPUSD1-204ENST00000563560 SAMD7Q7Z3H4 446 aa18.61■□□□□ 0.57
RPUSD1-204ENST00000563560 AGBL3Q8NEM8 1001 aa18.61■□□□□ 0.57
RPUSD1-204ENST00000563560 ZC3H15Q8WU90 426 aaKnown RBP18.61■□□□□ 0.57
RPUSD1-204ENST00000563560 IL1R1P14778 569 aa18.6■□□□□ 0.57
RPUSD1-204ENST00000563560 STRIP1Q5VSL9 837 aa18.6■□□□□ 0.57
RPUSD1-204ENST00000563560 JMYQ8N9B5 988 aa18.6■□□□□ 0.57
RPUSD1-204ENST00000563560 KLRG1Q96E93 195 aa18.6■□□□□ 0.57
RPUSD1-204ENST00000563560 MXD3Q9BW11 206 aa18.6■□□□□ 0.57
RPUSD1-204ENST00000563560 CD209Q9NNX6 404 aa18.6■□□□□ 0.57
RPUSD1-204ENST00000563560 CREBZFQ9NS37 354 aa18.6■□□□□ 0.57
RPUSD1-204ENST00000563560 THSD7BQ9C0I4 1608 aa18.6■□□□□ 0.57
RPUSD1-204ENST00000563560 ATG9AQ7Z3C6 839 aa18.59■□□□□ 0.57
RPUSD1-204ENST00000563560 CNNM1Q9NRU3 951 aa18.59■□□□□ 0.57
RPUSD1-204ENST00000563560 CLEC11AQ9Y240 323 aa18.59■□□□□ 0.57
RPUSD1-204ENST00000563560 LRRFIP2Q9Y608 721 aaKnown RBP18.59■□□□□ 0.57
RPUSD1-204ENST00000563560 MYH13Q9UKX3 1938 aa18.59■□□□□ 0.57
RPUSD1-204ENST00000563560 MROH5Q6ZUA9 1318 aa18.58■□□□□ 0.57
RPUSD1-204ENST00000563560 UBTFL1P0CB47 393 aaPredicted RBP18.58■□□□□ 0.56
RPUSD1-204ENST00000563560 FGFR2P21802 821 aa18.58■□□□□ 0.56
RPUSD1-204ENST00000563560 MTX1Q13505 466 aa18.58■□□□□ 0.56
RPUSD1-204ENST00000563560 UBE4AQ14139 1066 aa18.58■□□□□ 0.56
RPUSD1-204ENST00000563560 H7C1D1 291 aa18.57■□□□□ 0.56
RPUSD1-204ENST00000563560 TRAF5O00463 557 aa18.57■□□□□ 0.56
RPUSD1-204ENST00000563560 IPO8O15397 1037 aaKnown RBP18.57■□□□□ 0.56
RPUSD1-204ENST00000563560 RLBP1P12271 317 aa18.57■□□□□ 0.56
RPUSD1-204ENST00000563560 TBC1D10BQ4KMP7 808 aaPredicted RBP18.57■□□□□ 0.56
RPUSD1-204ENST00000563560 CST9Q5W186 159 aa18.57■□□□□ 0.56
RPUSD1-204ENST00000563560 CERS5Q8N5B7 392 aa18.57■□□□□ 0.56
RPUSD1-204ENST00000563560 FAM84BQ96KN1 310 aaPredicted RBP18.57■□□□□ 0.56
RPUSD1-204ENST00000563560 ASTN2O75129 1339 aaPredicted RBP18.56■□□□□ 0.56
RPUSD1-204ENST00000563560 TAF7LQ5H9L4 462 aa18.56■□□□□ 0.56
RPUSD1-204ENST00000563560 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
RPUSD1-204ENST00000563560 ZBED3Q96IU2 234 aaPredicted RBP18.56■□□□□ 0.56
RPUSD1-204ENST00000563560 EYA2O00167 538 aa18.55■□□□□ 0.56
RPUSD1-204ENST00000563560 PDE8BO95263 885 aa18.55■□□□□ 0.56
RPUSD1-204ENST00000563560 ZKSCAN2Q63HK3 967 aa18.55■□□□□ 0.56
RPUSD1-204ENST00000563560 TDRD7Q8NHU6 1098 aaKnown RBP18.55■□□□□ 0.56
RPUSD1-204ENST00000563560 FRAT1Q92837 279 aaPredicted RBP18.55■□□□□ 0.56
RPUSD1-204ENST00000563560 GLIS2Q9BZE0 524 aaPredicted RBP18.55■□□□□ 0.56
RPUSD1-204ENST00000563560 CNTNAP1P78357 1384 aa18.55■□□□□ 0.56
RPUSD1-204ENST00000563560 FAM205AQ6ZU69 1335 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 MYO3BQ8WXR4 1341 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 TMEM88BA6NKF7 163 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 G3V3G9 751 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 PLIN1O60240 522 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 USP17L8P0C7I0 530 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 KCNJ4P48050 445 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 KIF4BQ2VIQ3 1234 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 DCAF8Q5TAQ9 597 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 TTLL5Q6EMB2 1281 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 DLK2Q6UY11 383 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 FBXO33Q7Z6M2 555 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 CLUAP1Q96AJ1 413 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 COPRSQ9NQ92 184 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 FBXO3Q9UK99 471 aa18.54■□□□□ 0.56
RPUSD1-204ENST00000563560 CIAO1O76071 339 aa18.53■□□□□ 0.56
RPUSD1-204ENST00000563560 FKBP1AP62942 108 aaKnown RBP18.53■□□□□ 0.56
RPUSD1-204ENST00000563560 GTF2IP78347 998 aa18.53■□□□□ 0.56
RPUSD1-204ENST00000563560 MYOZ2Q9NPC6 264 aa18.53■□□□□ 0.56
RPUSD1-204ENST00000563560 RASSF10A6NK89 507 aa18.52■□□□□ 0.56
RPUSD1-204ENST00000563560 SASH1O94885 1247 aa18.52■□□□□ 0.56
RPUSD1-204ENST00000563560 GNAI3P08754 354 aa18.52■□□□□ 0.56
RPUSD1-204ENST00000563560 GYG1P46976 350 aa18.52■□□□□ 0.56
RPUSD1-204ENST00000563560 ZNF804AQ7Z570 1209 aa18.52■□□□□ 0.56
RPUSD1-204ENST00000563560 PA2G4Q9UQ80 394 aaKnown RBP18.52■□□□□ 0.56
RPUSD1-204ENST00000563560 COL1A1P02452 1464 aaPredicted RBP18.52■□□□□ 0.55
RPUSD1-204ENST00000563560 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
RPUSD1-204ENST00000563560 CDC37L1Q7L3B6 337 aa18.51■□□□□ 0.55
RPUSD1-204ENST00000563560 ZBTB7BO15156 539 aaPredicted RBP18.5■□□□□ 0.55
RPUSD1-204ENST00000563560 MMP14P50281 582 aa18.5■□□□□ 0.55
RPUSD1-204ENST00000563560 RBM26Q5T8P6 1007 aaKnown RBP18.5■□□□□ 0.55
RPUSD1-204ENST00000563560 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.5■□□□□ 0.55
RPUSD1-204ENST00000563560 PITPNM2Q9BZ72 1349 aa18.49■□□□□ 0.55
RPUSD1-204ENST00000563560 PNMA6EA0A0J9YXQ4 647 aa18.49■□□□□ 0.55
RPUSD1-204ENST00000563560 WNT10BO00744 389 aa18.49■□□□□ 0.55
RPUSD1-204ENST00000563560 ZBTB22O15209 634 aa18.49■□□□□ 0.55
RPUSD1-204ENST00000563560 HIBADHP31937 336 aaKnown RBP18.49■□□□□ 0.55
RPUSD1-204ENST00000563560 SCARF1Q14162 830 aa18.49■□□□□ 0.55
RPUSD1-204ENST00000563560 NBPF9Q3BBW0 867 aa18.49■□□□□ 0.55
RPUSD1-204ENST00000563560 USP48Q86UV5 1035 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms