RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 RIPOR2Q9Y4F9 1068 aa35.5■■■■□ 3.27
NME3-203ENST00000563367 KLHDC4Q8TBB5 520 aa35.49■■■■□ 3.27
NME3-203ENST00000563367 CLUAP1Q96AJ1 413 aa35.49■■■■□ 3.27
NME3-203ENST00000563367 COA1Q9GZY4 146 aa35.49■■■■□ 3.27
NME3-203ENST00000563367 RPS12P25398 132 aaKnown RBP35.48■■■■□ 3.27
NME3-203ENST00000563367 ZKSCAN2Q63HK3 967 aa35.48■■■■□ 3.27
NME3-203ENST00000563367 H7C1D1 291 aa35.47■■■■□ 3.27
NME3-203ENST00000563367 HIRAP54198 1017 aaPredicted RBP35.47■■■■□ 3.27
NME3-203ENST00000563367 LRRC24Q50LG9 513 aa35.47■■■■□ 3.27
NME3-203ENST00000563367 CNTROBQ8N137 903 aa35.47■■■■□ 3.27
NME3-203ENST00000563367 TRPM4Q8TD43 1214 aa35.47■■■■□ 3.27
NME3-203ENST00000563367 LRRFIP2Q9Y608 721 aaKnown RBP35.47■■■■□ 3.27
NME3-203ENST00000563367 PASKQ96RG2 1323 aa35.47■■■■□ 3.27
NME3-203ENST00000563367 USP17L3A6NCW0 530 aa35.46■■■■□ 3.27
NME3-203ENST00000563367 USP17L4A6NCW7 530 aa35.46■■■■□ 3.27
NME3-203ENST00000563367 RFX5P48382 616 aaPredicted RBP35.46■■■■□ 3.27
NME3-203ENST00000563367 RSBN1LQ6PCB5 846 aaPredicted RBP35.46■■■■□ 3.27
NME3-203ENST00000563367 C15orf52Q6ZUT6 534 aaKnown RBP35.46■■■■□ 3.27
NME3-203ENST00000563367 USP17L1Q7RTZ2 530 aa35.46■■■■□ 3.27
NME3-203ENST00000563367 POLR2AP24928 1970 aaKnown RBP35.44■■■■□ 3.26
NME3-203ENST00000563367 SAMD7Q7Z3H4 446 aa35.44■■■■□ 3.26
NME3-203ENST00000563367 DNAJC5GQ8N7S2 189 aa35.44■■■■□ 3.26
NME3-203ENST00000563367 ZNF609O15014 1411 aa35.43■■■■□ 3.26
NME3-203ENST00000563367 GMLQ99445 158 aa35.43■■■■□ 3.26
NME3-203ENST00000563367 MROH5Q6ZUA9 1318 aa35.42■■■■□ 3.26
NME3-203ENST00000563367 EGFRP00533 1210 aa35.42■■■■□ 3.26
NME3-203ENST00000563367 AGBL3Q8NEM8 1001 aa35.42■■■■□ 3.26
NME3-203ENST00000563367 CD209Q9NNX6 404 aa35.42■■■■□ 3.26
NME3-203ENST00000563367 DACT2Q5SW24 774 aa35.41■■■■□ 3.26
NME3-203ENST00000563367 TMEM57Q8N5G2 664 aa35.41■■■■□ 3.26
NME3-203ENST00000563367 MXD3Q9BW11 206 aa35.41■■■■□ 3.26
NME3-203ENST00000563367 PTPN12Q05209 780 aaKnown RBP35.4■■■■□ 3.26
NME3-203ENST00000563367 TBC1D10BQ4KMP7 808 aaPredicted RBP35.4■■■■□ 3.26
NME3-203ENST00000563367 FBXW7Q969H0 707 aa35.4■■■■□ 3.26
NME3-203ENST00000563367 PGAP2Q9UHJ9 254 aa35.4■■■■□ 3.26
NME3-203ENST00000563367 HDAC5Q9UQL6 1122 aa35.4■■■■□ 3.26
NME3-203ENST00000563367 GNAI3P08754 354 aa35.39■■■■□ 3.26
NME3-203ENST00000563367 UBE4AQ14139 1066 aa35.39■■■■□ 3.26
NME3-203ENST00000563367 STRIP1Q5VSL9 837 aa35.39■■■■□ 3.26
NME3-203ENST00000563367 METTL24Q5JXM2 366 aa35.38■■■■□ 3.25
NME3-203ENST00000563367 RBM26Q5T8P6 1007 aaKnown RBP35.38■■■■□ 3.25
NME3-203ENST00000563367 VGLL2Q8N8G2 317 aa35.38■■■■□ 3.25
NME3-203ENST00000563367 TRPM7Q96QT4 1865 aa35.37■■■■□ 3.25
NME3-203ENST00000563367 FMR1Q06787 632 aaKnown RBP eCLIP35.37■■■■□ 3.25
NME3-203ENST00000563367 ZNF280AP59817 542 aaPredicted RBP35.36■■■■□ 3.25
NME3-203ENST00000563367 GTF2IP78347 998 aa35.36■■■■□ 3.25
NME3-203ENST00000563367 TTLL5Q6EMB2 1281 aa35.36■■■■□ 3.25
NME3-203ENST00000563367 ZNF804AQ7Z570 1209 aa35.36■■■■□ 3.25
NME3-203ENST00000563367 ZC3H15Q8WU90 426 aaKnown RBP35.36■■■■□ 3.25
NME3-203ENST00000563367 EYA2O00167 538 aa35.35■■■■□ 3.25
NME3-203ENST00000563367 RLBP1P12271 317 aa35.35■■■■□ 3.25
NME3-203ENST00000563367 PDE8BO95263 885 aa35.34■■■■□ 3.25
NME3-203ENST00000563367 IL1R1P14778 569 aa35.34■■■■□ 3.25
NME3-203ENST00000563367 TRAF5O00463 557 aa35.33■■■■□ 3.25
NME3-203ENST00000563367 USP17L8P0C7I0 530 aa35.33■■■■□ 3.25
NME3-203ENST00000563367 KIF4BQ2VIQ3 1234 aa35.33■■■■□ 3.25
NME3-203ENST00000563367 ATG9AQ7Z3C6 839 aa35.33■■■■□ 3.25
NME3-203ENST00000563367 DZIP1LQ8IYY4 767 aaKnown RBP35.33■■■■□ 3.25
NME3-203ENST00000563367 CREBZFQ9NS37 354 aa35.33■■■■□ 3.25
NME3-203ENST00000563367 GYG1P46976 350 aa35.32■■■■□ 3.24
NME3-203ENST00000563367 FAM84BQ96KN1 310 aaPredicted RBP35.32■■■■□ 3.24
NME3-203ENST00000563367 SIL1Q9H173 461 aa35.32■■■■□ 3.24
NME3-203ENST00000563367 FTSJ3Q8IY81 847 aaKnown RBP35.31■■■■□ 3.24
NME3-203ENST00000563367 GLIS2Q9BZE0 524 aaPredicted RBP35.31■■■■□ 3.24
NME3-203ENST00000563367 PA2G4Q9UQ80 394 aaKnown RBP35.31■■■■□ 3.24
NME3-203ENST00000563367 KLRG1Q96E93 195 aa35.3■■■■□ 3.24
NME3-203ENST00000563367 MYO3BQ8WXR4 1341 aa35.3■■■■□ 3.24
NME3-203ENST00000563367 TMEM88BA6NKF7 163 aa35.29■■■■□ 3.24
NME3-203ENST00000563367 GNAI2P04899 355 aa35.29■■■■□ 3.24
NME3-203ENST00000563367 MYOZ2Q9NPC6 264 aa35.29■■■■□ 3.24
NME3-203ENST00000563367 CIAO1O76071 339 aa35.28■■■■□ 3.24
NME3-203ENST00000563367 HIBADHP31937 336 aaKnown RBP35.28■■■■□ 3.24
NME3-203ENST00000563367 MTX1Q13505 466 aa35.28■■■■□ 3.24
NME3-203ENST00000563367 COPRSQ9NQ92 184 aa35.28■■■■□ 3.24
NME3-203ENST00000563367 ASTN2O75129 1339 aaPredicted RBP35.28■■■■□ 3.24
NME3-203ENST00000563367 SRGAP3O43295 1099 aa35.27■■■■□ 3.24
NME3-203ENST00000563367 FGFR2P21802 821 aa35.27■■■■□ 3.24
NME3-203ENST00000563367 CERS5Q8N5B7 392 aa35.27■■■■□ 3.24
NME3-203ENST00000563367 TDRD7Q8NHU6 1098 aaKnown RBP35.27■■■■□ 3.24
NME3-203ENST00000563367 FBXO3Q9UK99 471 aa35.27■■■■□ 3.24
NME3-203ENST00000563367 JAG2Q9Y219 1238 aa35.27■■■■□ 3.24
NME3-203ENST00000563367 FBXO33Q7Z6M2 555 aa35.26■■■■□ 3.24
NME3-203ENST00000563367 ITPRIPQ8IWB1 547 aa35.26■■■■□ 3.24
NME3-203ENST00000563367 PUM3Q15397 648 aaKnown RBP35.25■■■■□ 3.23
NME3-203ENST00000563367 CDC37L1Q7L3B6 337 aa35.25■■■■□ 3.23
NME3-203ENST00000563367 KIAA0825Q8IV33 1275 aa35.25■■■■□ 3.23
NME3-203ENST00000563367 RCAN3Q9UKA8 241 aa35.25■■■■□ 3.23
NME3-203ENST00000563367 SASH1O94885 1247 aa35.24■■■■□ 3.23
NME3-203ENST00000563367 SCARF1Q14162 830 aa35.24■■■■□ 3.23
NME3-203ENST00000563367 CST9Q5W186 159 aa35.24■■■■□ 3.23
NME3-203ENST00000563367 DLK2Q6UY11 383 aa35.24■■■■□ 3.23
NME3-203ENST00000563367 USP48Q86UV5 1035 aa35.24■■■■□ 3.23
NME3-203ENST00000563367 PANK1Q8TE04 598 aa35.24■■■■□ 3.23
NME3-203ENST00000563367 OGFOD1Q8N543 542 aa35.23■■■■□ 3.23
NME3-203ENST00000563367 ZBTB7BO15156 539 aaPredicted RBP35.22■■■■□ 3.23
NME3-203ENST00000563367 GGA3Q9NZ52 723 aa35.22■■■■□ 3.23
NME3-203ENST00000563367 FAM205AQ6ZU69 1335 aa35.22■■■■□ 3.23
NME3-203ENST00000563367 PNMA6EA0A0J9YXQ4 647 aa35.21■■■■□ 3.23
NME3-203ENST00000563367 IL15P40933 162 aaPredicted RBP35.21■■■■□ 3.23
NME3-203ENST00000563367 DCPSQ96C86 337 aaKnown RBP35.21■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms