RNA–Protein interactions for RNA: ENST00000563246.1

SCAPER-206, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-206ENST00000563246 NEUROD1Q13562 356 aa8.92□□□□□ -0.98
SCAPER-206ENST00000563246 LRRC69Q6ZNQ3 347 aa8.92□□□□□ -0.98
SCAPER-206ENST00000563246 TRIM50Q86XT4 487 aa8.92□□□□□ -0.98
SCAPER-206ENST00000563246 SLC9A9Q8IVB4 645 aa8.92□□□□□ -0.98
SCAPER-206ENST00000563246 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.92□□□□□ -0.98
SCAPER-206ENST00000563246 KRTAP4-8Q9BYQ9 185 aa8.92□□□□□ -0.98
SCAPER-206ENST00000563246 TMEM131LA2VDJ0 1609 aa8.91□□□□□ -0.98
SCAPER-206ENST00000563246 LAMC1P11047 1609 aa8.91□□□□□ -0.98
SCAPER-206ENST00000563246 ASXL1Q8IXJ9 1541 aa8.91□□□□□ -0.98
SCAPER-206ENST00000563246 MST1RQ04912 1400 aa8.91□□□□□ -0.98
SCAPER-206ENST00000563246 SERTM1A2A2V5 107 aa8.91□□□□□ -0.98
SCAPER-206ENST00000563246 APBA3O96018 575 aa8.91□□□□□ -0.98
SCAPER-206ENST00000563246 HIRAP54198 1017 aaPredicted RBP8.91□□□□□ -0.98
SCAPER-206ENST00000563246 C1orf53Q5VUE5 145 aa8.91□□□□□ -0.98
SCAPER-206ENST00000563246 NACC1Q96RE7 527 aa8.91□□□□□ -0.98
SCAPER-206ENST00000563246 ZNF232Q9UNY5 417 aa8.91□□□□□ -0.98
SCAPER-206ENST00000563246 PTPRUQ92729 1446 aa8.9□□□□□ -0.98
SCAPER-206ENST00000563246 USP17L5A8MUK1 530 aa8.9□□□□□ -0.98
SCAPER-206ENST00000563246 RRP7BPQ9NSQ0 103 aa8.9□□□□□ -0.98
SCAPER-206ENST00000563246 ANKIB1Q9P2G1 1089 aa8.9□□□□□ -0.98
SCAPER-206ENST00000563246 CHMP3Q9Y3E7 222 aa8.9□□□□□ -0.98
SCAPER-206ENST00000563246 M0R082 166 aa8.89□□□□□ -0.99
SCAPER-206ENST00000563246 ATP1A2P50993 1020 aa8.89□□□□□ -0.99
SCAPER-206ENST00000563246 KCNQ4P56696 695 aa8.89□□□□□ -0.99
SCAPER-206ENST00000563246 PSMA6P60900 246 aaKnown RBP8.89□□□□□ -0.99
SCAPER-206ENST00000563246 RSPO4Q2I0M5 234 aaPredicted RBP8.89□□□□□ -0.99
SCAPER-206ENST00000563246 TPRNQ4KMQ1 711 aa8.89□□□□□ -0.99
SCAPER-206ENST00000563246 PLEKHM2Q8IWE5 1019 aa8.89□□□□□ -0.99
SCAPER-206ENST00000563246 ZNF417Q8TAU3 575 aa8.89□□□□□ -0.99
SCAPER-206ENST00000563246 RHPN1Q8TCX5 695 aa8.89□□□□□ -0.99
SCAPER-206ENST00000563246 ZNF587Q96SQ5 575 aaPredicted RBP8.89□□□□□ -0.99
SCAPER-206ENST00000563246 AMOTL2Q9Y2J4 779 aa8.89□□□□□ -0.99
SCAPER-206ENST00000563246 MYO5BQ9ULV0 1848 aa8.89□□□□□ -0.99
SCAPER-206ENST00000563246 ATRNO75882 1429 aa8.88□□□□□ -0.99
SCAPER-206ENST00000563246 M0R2N6 131 aa8.88□□□□□ -0.99
SCAPER-206ENST00000563246 COL9A3Q14050 684 aaPredicted RBP8.88□□□□□ -0.99
SCAPER-206ENST00000563246 NKAPLQ5M9Q1 402 aa8.88□□□□□ -0.99
SCAPER-206ENST00000563246 ZMYM1Q5SVZ6 1142 aa8.88□□□□□ -0.99
SCAPER-206ENST00000563246 KANK4Q5T7N3 995 aaPredicted RBP8.88□□□□□ -0.99
SCAPER-206ENST00000563246 TNS4Q8IZW8 715 aa8.88□□□□□ -0.99
SCAPER-206ENST00000563246 C8orf37Q96NL8 207 aa8.88□□□□□ -0.99
SCAPER-206ENST00000563246 CROCC2H7BZ55 1655 aa8.88□□□□□ -0.99
SCAPER-206ENST00000563246 SPEM2Q0P670 501 aa8.87□□□□□ -0.99
SCAPER-206ENST00000563246 SFSWAPQ12872 951 aaKnown RBP8.87□□□□□ -0.99
SCAPER-206ENST00000563246 MICALL1Q8N3F8 863 aa8.87□□□□□ -0.99
SCAPER-206ENST00000563246 SLC30A3Q99726 388 aa8.87□□□□□ -0.99
SCAPER-206ENST00000563246 TRPC5Q9UL62 973 aaPredicted RBP8.87□□□□□ -0.99
SCAPER-206ENST00000563246 STARD13Q9Y3M8 1113 aa8.87□□□□□ -0.99
SCAPER-206ENST00000563246 DAPK1P53355 1430 aa8.87□□□□□ -0.99
SCAPER-206ENST00000563246 PTCH1Q13635 1447 aa8.87□□□□□ -0.99
SCAPER-206ENST00000563246 TRPM2O94759 1503 aa8.86□□□□□ -0.99
SCAPER-206ENST00000563246 XRN1Q8IZH2 1706 aaKnown RBP8.86□□□□□ -0.99
SCAPER-206ENST00000563246 PPP1R15AO75807 674 aaPredicted RBP8.86□□□□□ -0.99
SCAPER-206ENST00000563246 ADH7P40394 386 aa8.86□□□□□ -0.99
SCAPER-206ENST00000563246 TRIM28Q13263 835 aaKnown RBP8.86□□□□□ -0.99
SCAPER-206ENST00000563246 EFCC1Q9HA90 598 aa8.86□□□□□ -0.99
SCAPER-206ENST00000563246 BRD7Q9NPI1 651 aa8.86□□□□□ -0.99
SCAPER-206ENST00000563246 LRP5O75197 1615 aa8.86□□□□□ -0.99
SCAPER-206ENST00000563246 ADGRL2O95490 1459 aa8.85□□□□□ -0.99
SCAPER-206ENST00000563246 BCL9LQ86UU0 1499 aa8.85□□□□□ -0.99
SCAPER-206ENST00000563246 ALBP02768 609 aa8.85□□□□□ -0.99
SCAPER-206ENST00000563246 NID1P14543 1247 aa8.85□□□□□ -0.99
SCAPER-206ENST00000563246 C14orf37Q86TY3 774 aa8.85□□□□□ -0.99
SCAPER-206ENST00000563246 TPCN2Q8NHX9 752 aa8.85□□□□□ -0.99
SCAPER-206ENST00000563246 TPSG1Q9NRR2 321 aa8.85□□□□□ -0.99
SCAPER-206ENST00000563246 USP21Q9UK80 565 aa8.85□□□□□ -0.99
SCAPER-206ENST00000563246 ANKRD30AQ9BXX3 1397 aa8.85□□□□□ -0.99
SCAPER-206ENST00000563246 GCC2Q8IWJ2 1684 aa8.85□□□□□ -0.99
SCAPER-206ENST00000563246 PTPN23Q9H3S7 1636 aa8.84□□□□□ -0.99
SCAPER-206ENST00000563246 ZBTB7BO15156 539 aaPredicted RBP8.84□□□□□ -0.99
SCAPER-206ENST00000563246 HIF1AQ16665 826 aa8.84□□□□□ -0.99
SCAPER-206ENST00000563246 TBCELQ5QJ74 424 aa8.84□□□□□ -0.99
SCAPER-206ENST00000563246 SH3PXD2AQ5TCZ1 1133 aa8.84□□□□□ -0.99
SCAPER-206ENST00000563246 CCDC102BQ68D86 513 aa8.84□□□□□ -0.99
SCAPER-206ENST00000563246 C20orf204Q6ZNR8 217 aa8.84□□□□□ -0.99
SCAPER-206ENST00000563246 DEPDC4Q8N2C3 294 aa8.84□□□□□ -0.99
SCAPER-206ENST00000563246 CEP63Q96MT8 703 aa8.84□□□□□ -0.99
SCAPER-206ENST00000563246 ADGRL3Q9HAR2 1447 aa8.84□□□□□ -0.99
SCAPER-206ENST00000563246 KCNH4Q9UQ05 1017 aa8.84□□□□□ -0.99
SCAPER-206ENST00000563246 UNC13BO14795 1591 aa8.83□□□□□ -1
SCAPER-206ENST00000563246 BLMP54132 1417 aaPredicted RBP8.83□□□□□ -1
SCAPER-206ENST00000563246 TYRO3Q06418 890 aa8.83□□□□□ -1
SCAPER-206ENST00000563246 LARGE2Q8N3Y3 721 aa8.83□□□□□ -1
SCAPER-206ENST00000563246 DDX17Q92841 729 aaKnown RBP8.83□□□□□ -1
SCAPER-206ENST00000563246 PSMG3-AS1Q96PY0 264 aa8.83□□□□□ -1
SCAPER-206ENST00000563246 TSPAN10Q9H1Z9 355 aaPredicted RBP8.83□□□□□ -1
SCAPER-206ENST00000563246 COL22A1Q8NFW1 1626 aaPredicted RBP8.83□□□□□ -1
SCAPER-206ENST00000563246 NRXN3Q9Y4C0 1643 aa8.83□□□□□ -1
SCAPER-206ENST00000563246 C1orf167Q5SNV9 1468 aa8.83□□□□□ -1
SCAPER-206ENST00000563246 VPS8Q8N3P4 1428 aa8.82□□□□□ -1
SCAPER-206ENST00000563246 USP17L3A6NCW0 530 aa8.82□□□□□ -1
SCAPER-206ENST00000563246 USP17L4A6NCW7 530 aa8.82□□□□□ -1
SCAPER-206ENST00000563246 C9orf172C9J069 976 aa8.82□□□□□ -1
SCAPER-206ENST00000563246 DYRK3O43781 588 aa8.82□□□□□ -1
SCAPER-206ENST00000563246 RAD21O60216 631 aa8.82□□□□□ -1
SCAPER-206ENST00000563246 USP17L2Q6R6M4 530 aa8.82□□□□□ -1
SCAPER-206ENST00000563246 USP17L1Q7RTZ2 530 aa8.82□□□□□ -1
SCAPER-206ENST00000563246 STAG2Q8N3U4 1231 aa8.82□□□□□ -1
SCAPER-206ENST00000563246 PHACTR1Q9C0D0 580 aa8.82□□□□□ -1
SCAPER-206ENST00000563246 KIAA1024Q9UPX6 916 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms