RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 PARP3Q9Y6F1 533 aa8.87□□□□□ -0.99
TCF4-213ENST00000562543 HTTP42858 3142 aa8.87□□□□□ -0.99
TCF4-213ENST00000562543 INSRP06213 1382 aa8.86□□□□□ -0.99
TCF4-213ENST00000562543 FAM208AQ9UK61 1670 aaKnown RBP8.86□□□□□ -0.99
TCF4-213ENST00000562543 GRM5P41594 1212 aa8.86□□□□□ -0.99
TCF4-213ENST00000562543 NBPF1Q3BBV0 1214 aa8.86□□□□□ -0.99
TCF4-213ENST00000562543 LINC00116Q8NCU8 138 aa8.86□□□□□ -0.99
TCF4-213ENST00000562543 CDK15Q96Q40 435 aa8.86□□□□□ -0.99
TCF4-213ENST00000562543 ZBTB3Q9H5J0 574 aa8.86□□□□□ -0.99
TCF4-213ENST00000562543 TRAK1Q9UPV9 953 aa8.86□□□□□ -0.99
TCF4-213ENST00000562543 CENPFP49454 3210 aa8.86□□□□□ -0.99
TCF4-213ENST00000562543 GJA5P36382 358 aa8.85□□□□□ -0.99
TCF4-213ENST00000562543 QPCTQ16769 361 aa8.85□□□□□ -0.99
TCF4-213ENST00000562543 RGL3Q3MIN7 710 aa8.85□□□□□ -0.99
TCF4-213ENST00000562543 KCNH5Q8NCM2 988 aa8.85□□□□□ -0.99
TCF4-213ENST00000562543 SAGE1Q9NXZ1 904 aa8.85□□□□□ -0.99
TCF4-213ENST00000562543 LIMD1Q9UGP4 676 aa8.85□□□□□ -0.99
TCF4-213ENST00000562543 LTN1O94822 1766 aa8.85□□□□□ -0.99
TCF4-213ENST00000562543 PAPPA2Q9BXP8 1791 aa8.85□□□□□ -0.99
TCF4-213ENST00000562543 ITGB4P16144 1822 aa8.84□□□□□ -0.99
TCF4-213ENST00000562543 GYS1P13807 737 aa8.84□□□□□ -0.99
TCF4-213ENST00000562543 FMR1Q06787 632 aaKnown RBP eCLIP8.84□□□□□ -0.99
TCF4-213ENST00000562543 CST9Q5W186 159 aa8.84□□□□□ -0.99
TCF4-213ENST00000562543 FAM122AQ96E09 287 aa8.84□□□□□ -0.99
TCF4-213ENST00000562543 EPHX2P34913 555 aa8.83□□□□□ -1
TCF4-213ENST00000562543 PKN2Q16513 984 aaKnown RBP8.83□□□□□ -1
TCF4-213ENST00000562543 HHIPL1Q96JK4 782 aa8.83□□□□□ -1
TCF4-213ENST00000562543 CDK19Q9BWU1 502 aa8.83□□□□□ -1
TCF4-213ENST00000562543 RAPGEFL1Q9UHV5 662 aa8.83□□□□□ -1
TCF4-213ENST00000562543 AKAP11Q9UKA4 1901 aa8.82□□□□□ -1
TCF4-213ENST00000562543 FAM181BA6NEQ2 426 aa8.82□□□□□ -1
TCF4-213ENST00000562543 SAPCD2Q86UD0 394 aa8.82□□□□□ -1
TCF4-213ENST00000562543 PNMA8AQ86V59 439 aaPredicted RBP8.82□□□□□ -1
TCF4-213ENST00000562543 ZIC5Q96T25 663 aa8.82□□□□□ -1
TCF4-213ENST00000562543 HACL1Q9UJ83 578 aa8.82□□□□□ -1
TCF4-213ENST00000562543 MAN1A2O60476 641 aa8.81□□□□□ -1
TCF4-213ENST00000562543 DIXDC1Q155Q3 683 aa8.81□□□□□ -1
TCF4-213ENST00000562543 LTBP3Q9NS15 1303 aa8.8□□□□□ -1
TCF4-213ENST00000562543 TTC28Q96AY4 2481 aa8.8□□□□□ -1
TCF4-213ENST00000562543 KIAA0100Q14667 2235 aaKnown RBP8.8□□□□□ -1
TCF4-213ENST00000562543 BMP2P12643 396 aa8.8□□□□□ -1
TCF4-213ENST00000562543 DDR1Q08345 913 aa8.8□□□□□ -1
TCF4-213ENST00000562543 NOGQ13253 232 aa8.8□□□□□ -1
TCF4-213ENST00000562543 NR5A1Q13285 461 aa8.8□□□□□ -1
TCF4-213ENST00000562543 AKAP4Q5JQC9 854 aa8.8□□□□□ -1
TCF4-213ENST00000562543 MYSM1Q5VVJ2 828 aa8.8□□□□□ -1
TCF4-213ENST00000562543 ANKRD24Q8TF21 1146 aa8.8□□□□□ -1
TCF4-213ENST00000562543 SMARCC1Q92922 1105 aaPredicted RBP8.8□□□□□ -1
TCF4-213ENST00000562543 AFDNP55196 1824 aaKnown RBP8.8□□□□□ -1
TCF4-213ENST00000562543 NRXN2Q9P2S2 1712 aa8.8□□□□□ -1
TCF4-213ENST00000562543 ITPK1Q13572 414 aa8.79□□□□□ -1
TCF4-213ENST00000562543 RTL5Q5HYW3 569 aaPredicted RBP8.79□□□□□ -1
TCF4-213ENST00000562543 BPHLQ86WA6 291 aaPredicted RBP8.79□□□□□ -1
TCF4-213ENST00000562543 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.79□□□□□ -1
TCF4-213ENST00000562543 TTLL6Q8N841 843 aa8.79□□□□□ -1
TCF4-213ENST00000562543 SMG6Q86US8 1419 aaKnown RBP8.79□□□□□ -1
TCF4-213ENST00000562543 COL5A3P25940 1745 aaPredicted RBP8.78□□□□□ -1
TCF4-213ENST00000562543 LOC102724428A0A0B4J2F2 783 aa8.78□□□□□ -1
TCF4-213ENST00000562543 H0YGN5 161 aa8.78□□□□□ -1
TCF4-213ENST00000562543 SIK1P57059 783 aa8.78□□□□□ -1
TCF4-213ENST00000562543 TRAPPC3LQ5T215 181 aa8.78□□□□□ -1
TCF4-213ENST00000562543 ZCRB1Q8TBF4 217 aaKnown RBP8.78□□□□□ -1
TCF4-213ENST00000562543 USP31Q70CQ4 1352 aa8.77□□□□□ -1.01
TCF4-213ENST00000562543 MAGEB6P1A0A0J9YX57 407 aa8.77□□□□□ -1.01
TCF4-213ENST00000562543 TRAF5O00463 557 aa8.77□□□□□ -1.01
TCF4-213ENST00000562543 LILRB3O75022 631 aa8.77□□□□□ -1.01
TCF4-213ENST00000562543 PPFIA3O75145 1194 aa8.77□□□□□ -1.01
TCF4-213ENST00000562543 FSHRP23945 695 aa8.77□□□□□ -1.01
TCF4-213ENST00000562543 FBXO46Q6PJ61 603 aaPredicted RBP8.77□□□□□ -1.01
TCF4-213ENST00000562543 LINC00528Q8N1L1 170 aa8.77□□□□□ -1.01
TCF4-213ENST00000562543 DNMT3LQ9UJW3 386 aa8.77□□□□□ -1.01
TCF4-213ENST00000562543 RNF123Q5XPI4 1314 aa8.77□□□□□ -1.01
TCF4-213ENST00000562543 ZNF541Q9H0D2 1346 aa8.77□□□□□ -1.01
TCF4-213ENST00000562543 ZNF831Q5JPB2 1677 aa8.76□□□□□ -1.01
TCF4-213ENST00000562543 VSIG8P0DPA2 414 aa8.76□□□□□ -1.01
TCF4-213ENST00000562543 PDE4DQ08499 809 aa8.76□□□□□ -1.01
TCF4-213ENST00000562543 MPRIPQ6WCQ1 1025 aa8.76□□□□□ -1.01
TCF4-213ENST00000562543 SH3RF1Q7Z6J0 888 aa8.76□□□□□ -1.01
TCF4-213ENST00000562543 PRO3102Q9H379 93 aa8.76□□□□□ -1.01
TCF4-213ENST00000562543 RNF186Q9NXI6 227 aa8.76□□□□□ -1.01
TCF4-213ENST00000562543 STXBP5LQ9Y2K9 1186 aa8.76□□□□□ -1.01
TCF4-213ENST00000562543 RTCBQ9Y3I0 505 aaKnown RBP8.76□□□□□ -1.01
TCF4-213ENST00000562543 EYSQ5T1H1 3165 aa8.76□□□□□ -1.01
TCF4-213ENST00000562543 RGPD2P0DJD1 1756 aa8.76□□□□□ -1.01
TCF4-213ENST00000562543 LAMA2P24043 3122 aaKnown RBP8.76□□□□□ -1.01
TCF4-213ENST00000562543 POLRMTO00411 1230 aaKnown RBP8.75□□□□□ -1.01
TCF4-213ENST00000562543 SOX1O00570 391 aaPredicted RBP8.75□□□□□ -1.01
TCF4-213ENST00000562543 TRPA1O75762 1119 aa8.75□□□□□ -1.01
TCF4-213ENST00000562543 VASH1Q7L8A9 365 aaPredicted RBP8.75□□□□□ -1.01
TCF4-213ENST00000562543 MEIOBQ8N635 442 aa8.75□□□□□ -1.01
TCF4-213ENST00000562543 CARD14Q9BXL6 1004 aa8.75□□□□□ -1.01
TCF4-213ENST00000562543 TAOK3Q9H2K8 898 aa8.75□□□□□ -1.01
TCF4-213ENST00000562543 BCORQ6W2J9 1755 aa8.75□□□□□ -1.01
TCF4-213ENST00000562543 PIEZO1Q92508 2521 aa8.75□□□□□ -1.01
TCF4-213ENST00000562543 COL11A2P13942 1736 aaPredicted RBP8.74□□□□□ -1.01
TCF4-213ENST00000562543 MYH14Q7Z406 1995 aaKnown RBP8.74□□□□□ -1.01
TCF4-213ENST00000562543 UPP2O95045 317 aa8.74□□□□□ -1.01
TCF4-213ENST00000562543 SH3BP5LQ7L8J4 393 aa8.74□□□□□ -1.01
TCF4-213ENST00000562543 C1QTNF2Q9BXJ5 285 aa8.74□□□□□ -1.01
TCF4-213ENST00000562543 POLR3EQ9NVU0 708 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms