RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 PRDM11Q9NQV5 511 aa12.9□□□□□ -0.34
NEIL1-202ENST00000561643 PALLDQ8WX93 1383 aa12.89□□□□□ -0.35
NEIL1-202ENST00000561643 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
NEIL1-202ENST00000561643 RESTQ13127 1097 aa12.89□□□□□ -0.35
NEIL1-202ENST00000561643 LRRC24Q50LG9 513 aa12.89□□□□□ -0.35
NEIL1-202ENST00000561643 MRVI1Q9Y6F6 885 aa12.89□□□□□ -0.35
NEIL1-202ENST00000561643 EYA2O00167 538 aa12.89□□□□□ -0.35
NEIL1-202ENST00000561643 GPR108Q9NPR9 543 aa12.89□□□□□ -0.35
NEIL1-202ENST00000561643 CEBPZQ03701 1054 aaKnown RBP12.89□□□□□ -0.35
NEIL1-202ENST00000561643 CCDC191Q8NCU4 936 aa12.89□□□□□ -0.35
NEIL1-202ENST00000561643 DSCC1Q9BVC3 393 aa12.89□□□□□ -0.35
NEIL1-202ENST00000561643 ZSCAN16Q9H4T2 348 aaPredicted RBP12.89□□□□□ -0.35
NEIL1-202ENST00000561643 ZNF330Q9Y3S2 320 aaPredicted RBP12.89□□□□□ -0.35
NEIL1-202ENST00000561643 DCCP43146 1447 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 CPDO75976 1380 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 PKD1L3Q7Z443 1732 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 A0A1B0GUL7 405 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 GOLGA6L6A8MZA4 724 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 PFKFB2O60825 505 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 APOBRQ0VD83 1088 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 ANO6Q4KMQ2 910 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 ZMYM1Q5SVZ6 1142 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 LUZP1Q86V48 1076 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 PGBD1Q96JS3 809 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 CLSTN2Q9H4D0 955 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 CFAP45Q9UL16 551 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 NR1I2O75469 434 aa12.88□□□□□ -0.35
NEIL1-202ENST00000561643 LLPHQ9BRT6 129 aaKnown RBP12.88□□□□□ -0.35
NEIL1-202ENST00000561643 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
NEIL1-202ENST00000561643 CCT2P78371 535 aaKnown RBP12.87□□□□□ -0.35
NEIL1-202ENST00000561643 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
NEIL1-202ENST00000561643 RNF113AO15541 343 aaKnown RBP12.87□□□□□ -0.35
NEIL1-202ENST00000561643 HSPD1P10809 573 aaKnown RBP12.87□□□□□ -0.35
NEIL1-202ENST00000561643 GORABQ5T7V8 394 aa12.87□□□□□ -0.35
NEIL1-202ENST00000561643 NSUN7Q8NE18 718 aaKnown RBP12.87□□□□□ -0.35
NEIL1-202ENST00000561643 SMARCC2Q8TAQ2 1214 aa12.87□□□□□ -0.35
NEIL1-202ENST00000561643 PUS3Q9BZE2 481 aaKnown RBP12.87□□□□□ -0.35
NEIL1-202ENST00000561643 MAST3O60307 1309 aa12.87□□□□□ -0.35
NEIL1-202ENST00000561643 WDR17Q8IZU2 1322 aa12.87□□□□□ -0.35
NEIL1-202ENST00000561643 PTPDC1A2A3K4 754 aa12.87□□□□□ -0.35
NEIL1-202ENST00000561643 TPM3P06753 285 aa12.87□□□□□ -0.35
NEIL1-202ENST00000561643 FKBP4Q02790 459 aaKnown RBP eCLIP12.87□□□□□ -0.35
NEIL1-202ENST00000561643 CBX8Q9HC52 389 aa12.87□□□□□ -0.35
NEIL1-202ENST00000561643 CEP126Q9P2H0 1117 aa12.87□□□□□ -0.35
NEIL1-202ENST00000561643 LAMB4A4D0S4 1761 aa12.86□□□□□ -0.35
NEIL1-202ENST00000561643 E7EWF7 191 aa12.86□□□□□ -0.35
NEIL1-202ENST00000561643 GLI3P10071 1580 aa12.86□□□□□ -0.35
NEIL1-202ENST00000561643 A0A0G2JLW4 131 aa12.86□□□□□ -0.35
NEIL1-202ENST00000561643 PPFIA3O75145 1194 aa12.86□□□□□ -0.35
NEIL1-202ENST00000561643 CCDC57Q2TAC2 916 aa12.86□□□□□ -0.35
NEIL1-202ENST00000561643 CHST3Q7LGC8 479 aa12.86□□□□□ -0.35
NEIL1-202ENST00000561643 TRERF1Q96PN7 1200 aa12.86□□□□□ -0.35
NEIL1-202ENST00000561643 NCOA5Q9HCD5 579 aaKnown RBP12.86□□□□□ -0.35
NEIL1-202ENST00000561643 CIAO1O76071 339 aa12.85□□□□□ -0.35
NEIL1-202ENST00000561643 EXOSC10Q01780 885 aaKnown RBP12.85□□□□□ -0.35
NEIL1-202ENST00000561643 TAF3Q5VWG9 929 aa12.85□□□□□ -0.35
NEIL1-202ENST00000561643 NAA16Q6N069 864 aaPredicted RBP12.85□□□□□ -0.35
NEIL1-202ENST00000561643 DRC7Q8IY82 874 aa12.85□□□□□ -0.35
NEIL1-202ENST00000561643 CCDC85AQ96PX6 553 aaPredicted RBP12.85□□□□□ -0.35
NEIL1-202ENST00000561643 CTDNEP1O95476 244 aa12.85□□□□□ -0.35
NEIL1-202ENST00000561643 CCDC158Q5M9N0 1113 aa12.85□□□□□ -0.35
NEIL1-202ENST00000561643 TTC39AQ5SRH9 613 aa12.85□□□□□ -0.35
NEIL1-202ENST00000561643 RBM43Q6ZSC3 357 aaKnown RBP12.85□□□□□ -0.35
NEIL1-202ENST00000561643 ATG3Q9NT62 314 aa12.85□□□□□ -0.35
NEIL1-202ENST00000561643 M0R2C6 588 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 WASHC4Q2M389 1173 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 TTLL5Q6EMB2 1281 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 DNAJC25Q9H1X3 360 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 KCNF1Q9H3M0 494 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 IL2RBP14784 551 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 ZNF165P49910 485 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 GUCY1B3Q02153 619 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 LRRFIP1Q32MZ4 808 aaKnown RBP12.84□□□□□ -0.35
NEIL1-202ENST00000561643 TICAM2Q86XR7 235 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 TRIM5Q9C035 493 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 FTOQ9C0B1 505 aaKnown RBP eCLIP12.84□□□□□ -0.35
NEIL1-202ENST00000561643 SPTLC3Q9NUV7 552 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 PYCARDQ9ULZ3 195 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 STRN4Q9NRL3 753 aa12.84□□□□□ -0.35
NEIL1-202ENST00000561643 KIAA1524Q8TCG1 905 aa12.83□□□□□ -0.36
NEIL1-202ENST00000561643 OSBP2Q969R2 916 aa12.83□□□□□ -0.36
NEIL1-202ENST00000561643 AGXT2Q9BYV1 514 aa12.83□□□□□ -0.36
NEIL1-202ENST00000561643 PARP4Q9UKK3 1724 aaKnown RBP12.83□□□□□ -0.36
NEIL1-202ENST00000561643 PTGS1P23219 599 aa12.83□□□□□ -0.36
NEIL1-202ENST00000561643 PDIA3P30101 505 aaKnown RBP12.83□□□□□ -0.36
NEIL1-202ENST00000561643 ADORA1P30542 326 aa12.83□□□□□ -0.36
NEIL1-202ENST00000561643 CCAR1Q8IX12 1150 aaKnown RBP12.83□□□□□ -0.36
NEIL1-202ENST00000561643 ANKRD7Q92527 254 aa12.83□□□□□ -0.36
NEIL1-202ENST00000561643 ZNF396Q96N95 335 aaPredicted RBP12.83□□□□□ -0.36
NEIL1-202ENST00000561643 AKAP2Q9Y2D5 859 aa12.83□□□□□ -0.36
NEIL1-202ENST00000561643 HAND2P61296 217 aa12.82□□□□□ -0.36
NEIL1-202ENST00000561643 IRX5P78411 483 aaPredicted RBP12.82□□□□□ -0.36
NEIL1-202ENST00000561643 CHAF1AQ13111 956 aaPredicted RBP12.82□□□□□ -0.36
NEIL1-202ENST00000561643 TCIRG1Q13488 830 aa12.82□□□□□ -0.36
NEIL1-202ENST00000561643 CCDC73Q6ZRK6 1079 aa12.82□□□□□ -0.36
NEIL1-202ENST00000561643 BRINP3Q76B58 766 aa12.82□□□□□ -0.36
NEIL1-202ENST00000561643 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
NEIL1-202ENST00000561643 ADD1P35611 737 aaKnown RBP12.82□□□□□ -0.36
NEIL1-202ENST00000561643 IRX3P78415 501 aaPredicted RBP12.82□□□□□ -0.36
NEIL1-202ENST00000561643 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms