RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 ZNF157P51786 506 aaPredicted RBP32.25■■■□□ 2.75
NME3-202ENST00000561637 GGA1Q9UJY5 639 aa32.25■■■□□ 2.75
NME3-202ENST00000561637 CCDC102AQ96A19 550 aa32.24■■■□□ 2.75
NME3-202ENST00000561637 DCPSQ96C86 337 aaKnown RBP32.24■■■□□ 2.75
NME3-202ENST00000561637 EYA3Q99504 573 aa32.23■■■□□ 2.75
NME3-202ENST00000561637 ASTN2O75129 1339 aaPredicted RBP32.23■■■□□ 2.75
NME3-202ENST00000561637 BEND3Q5T5X7 828 aa32.22■■■□□ 2.75
NME3-202ENST00000561637 RPS12P25398 132 aaKnown RBP32.21■■■□□ 2.75
NME3-202ENST00000561637 CSRNP1Q96S65 589 aa32.21■■■□□ 2.75
NME3-202ENST00000561637 CDC5LQ99459 802 aaKnown RBP32.21■■■□□ 2.75
NME3-202ENST00000561637 PLA2G12BQ9BX93 195 aa32.21■■■□□ 2.75
NME3-202ENST00000561637 ZC3H12CQ9C0D7 883 aaKnown RBP32.2■■■□□ 2.75
NME3-202ENST00000561637 MINPP1Q9UNW1 487 aa32.2■■■□□ 2.75
NME3-202ENST00000561637 XDHP47989 1333 aa32.2■■■□□ 2.74
NME3-202ENST00000561637 SLC10A3P09131 477 aa32.19■■■□□ 2.74
NME3-202ENST00000561637 KIF4BQ2VIQ3 1234 aa32.19■■■□□ 2.74
NME3-202ENST00000561637 BSDC1Q9NW68 430 aaPredicted RBP32.18■■■□□ 2.74
NME3-202ENST00000561637 GGA3Q9NZ52 723 aa32.18■■■□□ 2.74
NME3-202ENST00000561637 ITGA6P23229 1130 aa32.17■■■□□ 2.74
NME3-202ENST00000561637 CDCA7LQ96GN5 454 aa32.17■■■□□ 2.74
NME3-202ENST00000561637 CSF1RP07333 972 aa32.16■■■□□ 2.74
NME3-202ENST00000561637 EPHA10Q5JZY3 1008 aa32.16■■■□□ 2.74
NME3-202ENST00000561637 VIL1P09327 827 aaKnown RBP32.15■■■□□ 2.74
NME3-202ENST00000561637 SULF1Q8IWU6 871 aa32.15■■■□□ 2.74
NME3-202ENST00000561637 CDCA5Q96FF9 252 aa32.15■■■□□ 2.74
NME3-202ENST00000561637 PSME4Q14997 1843 aa32.14■■■□□ 2.74
NME3-202ENST00000561637 ATP2B4P23634 1241 aa32.14■■■□□ 2.74
NME3-202ENST00000561637 FOXO4P98177 505 aa32.14■■■□□ 2.74
NME3-202ENST00000561637 SLC4A10Q6U841 1118 aa32.13■■■□□ 2.73
NME3-202ENST00000561637 KLRK1P26718 216 aa32.12■■■□□ 2.73
NME3-202ENST00000561637 SLFN5Q08AF3 891 aa32.12■■■□□ 2.73
NME3-202ENST00000561637 CTU1Q7Z7A3 348 aaKnown RBP32.12■■■□□ 2.73
NME3-202ENST00000561637 RASAL3Q86YV0 1011 aa32.12■■■□□ 2.73
NME3-202ENST00000561637 MRPL50Q8N5N7 158 aaKnown RBP32.12■■■□□ 2.73
NME3-202ENST00000561637 G3V3G9 751 aa32.11■■■□□ 2.73
NME3-202ENST00000561637 IGHMBP2P38935 993 aaKnown RBP32.11■■■□□ 2.73
NME3-202ENST00000561637 CCT4P50991 539 aaKnown RBP32.11■■■□□ 2.73
NME3-202ENST00000561637 DCAF8Q5TAQ9 597 aa32.11■■■□□ 2.73
NME3-202ENST00000561637 TXNRD3Q86VQ6 643 aa32.11■■■□□ 2.73
NME3-202ENST00000561637 E9PSI1 815 aa32.1■■■□□ 2.73
NME3-202ENST00000561637 ANGEL2Q5VTE6 544 aaKnown RBP32.09■■■□□ 2.73
NME3-202ENST00000561637 SNAP23O00161 211 aa32.08■■■□□ 2.73
NME3-202ENST00000561637 GRM8O00222 908 aa32.08■■■□□ 2.73
NME3-202ENST00000561637 SCARF1Q14162 830 aa32.08■■■□□ 2.73
NME3-202ENST00000561637 SSH1Q8WYL5 1049 aa32.08■■■□□ 2.73
NME3-202ENST00000561637 CHMP3Q9Y3E7 222 aa32.08■■■□□ 2.73
NME3-202ENST00000561637 MED23Q9ULK4 1368 aa32.07■■■□□ 2.73
NME3-202ENST00000561637 PAPPA2Q9BXP8 1791 aa32.07■■■□□ 2.72
NME3-202ENST00000561637 ZNF280AP59817 542 aaPredicted RBP32.07■■■□□ 2.72
NME3-202ENST00000561637 MXD3Q9BW11 206 aa32.07■■■□□ 2.72
NME3-202ENST00000561637 LMBR1LQ6UX01 489 aa32.06■■■□□ 2.72
NME3-202ENST00000561637 MPHOSPH8Q99549 860 aa32.06■■■□□ 2.72
NME3-202ENST00000561637 SCAF8Q9UPN6 1271 aaKnown RBP32.06■■■□□ 2.72
NME3-202ENST00000561637 ANKRD18BA2A2Z9 1011 aa32.05■■■□□ 2.72
NME3-202ENST00000561637 CCER2I3L3R5 266 aa32.05■■■□□ 2.72
NME3-202ENST00000561637 CHRNDQ07001 517 aa32.05■■■□□ 2.72
NME3-202ENST00000561637 RSBN1LQ6PCB5 846 aaPredicted RBP32.05■■■□□ 2.72
NME3-202ENST00000561637 MOB2Q70IA6 237 aa32.05■■■□□ 2.72
NME3-202ENST00000561637 HELBQ8NG08 1087 aaPredicted RBP32.05■■■□□ 2.72
NME3-202ENST00000561637 ZNF594Q96JF6 807 aaPredicted RBP32.05■■■□□ 2.72
NME3-202ENST00000561637 SRCIN1Q9C0H9 1055 aa32.05■■■□□ 2.72
NME3-202ENST00000561637 HPS5Q9UPZ3 1129 aa32.05■■■□□ 2.72
NME3-202ENST00000561637 ALDH1L1O75891 902 aa32.04■■■□□ 2.72
NME3-202ENST00000561637 SUCLG2Q96I99 432 aa32.04■■■□□ 2.72
NME3-202ENST00000561637 ZNF646O15015 1829 aaPredicted RBP32.04■■■□□ 2.72
NME3-202ENST00000561637 ZNF609O15014 1411 aa32.03■■■□□ 2.72
NME3-202ENST00000561637 KAZALD1Q96I82 304 aa32.03■■■□□ 2.72
NME3-202ENST00000561637 GMLQ99445 158 aa32.03■■■□□ 2.72
NME3-202ENST00000561637 C9orf78Q9NZ63 289 aaPredicted RBP32.03■■■□□ 2.72
NME3-202ENST00000561637 ZNF804BA4D1E1 1349 aa32.02■■■□□ 2.72
NME3-202ENST00000561637 A0A1B0GUL6 1792 aa32.02■■■□□ 2.72
NME3-202ENST00000561637 TAF5LO75529 589 aa32.02■■■□□ 2.72
NME3-202ENST00000561637 PRPF38BQ5VTL8 546 aaKnown RBP32.02■■■□□ 2.72
NME3-202ENST00000561637 REM2Q8IYK8 340 aaPredicted RBP32.02■■■□□ 2.72
NME3-202ENST00000561637 AGBL3Q8NEM8 1001 aa32.02■■■□□ 2.72
NME3-202ENST00000561637 NBPF7P0C2Y1 421 aaPredicted RBP32.01■■■□□ 2.71
NME3-202ENST00000561637 IFIT5Q13325 482 aaKnown RBP32.01■■■□□ 2.71
NME3-202ENST00000561637 LEMD3Q9Y2U8 911 aa32.01■■■□□ 2.71
NME3-202ENST00000561637 USP17L3A6NCW0 530 aa32■■■□□ 2.71
NME3-202ENST00000561637 USP17L4A6NCW7 530 aa32■■■□□ 2.71
NME3-202ENST00000561637 USP17L1Q7RTZ2 530 aa32■■■□□ 2.71
NME3-202ENST00000561637 PODNQ7Z5L7 613 aa32■■■□□ 2.71
NME3-202ENST00000561637 TRMT2AQ8IZ69 625 aaKnown RBP32■■■□□ 2.71
NME3-202ENST00000561637 ANKRD2Q9GZV1 360 aa32■■■□□ 2.71
NME3-202ENST00000561637 MYOZ2Q9NPC6 264 aa32■■■□□ 2.71
NME3-202ENST00000561637 TBC1D8O95759 1140 aa31.99■■■□□ 2.71
NME3-202ENST00000561637 FKBP1BP68106 108 aa31.99■■■□□ 2.71
NME3-202ENST00000561637 PRAMEF18Q5VWM3 479 aa31.99■■■□□ 2.71
NME3-202ENST00000561637 ZNF296Q8WUU4 475 aaPredicted RBP31.99■■■□□ 2.71
NME3-202ENST00000561637 FBXW7Q969H0 707 aa31.99■■■□□ 2.71
NME3-202ENST00000561637 IRS2Q9Y4H2 1338 aa31.99■■■□□ 2.71
NME3-202ENST00000561637 UBE2Q2LH0YL09 131 aa31.98■■■□□ 2.71
NME3-202ENST00000561637 DACT2Q5SW24 774 aa31.98■■■□□ 2.71
NME3-202ENST00000561637 USP17L8P0C7I0 530 aa31.97■■■□□ 2.71
NME3-202ENST00000561637 PITPNM2Q9BZ72 1349 aa31.97■■■□□ 2.71
NME3-202ENST00000561637 COA1Q9GZY4 146 aa31.96■■■□□ 2.71
NME3-202ENST00000561637 HDAC9Q9UKV0 1011 aa31.96■■■□□ 2.71
NME3-202ENST00000561637 KCNJ4P48050 445 aa31.95■■■□□ 2.71
NME3-202ENST00000561637 UTYO14607 1347 aa31.94■■■□□ 2.7
NME3-202ENST00000561637 PTPRCP08575 1304 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms