RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 ARHGAP45Q92619 1136 aa29.97■■■□□ 2.39
CDR2-202ENST00000561630 CNNM1Q9NRU3 951 aa29.97■■■□□ 2.39
CDR2-202ENST00000561630 C15orf52Q6ZUT6 534 aaKnown RBP29.96■■■□□ 2.39
CDR2-202ENST00000561630 SAMD7Q7Z3H4 446 aa29.96■■■□□ 2.39
CDR2-202ENST00000561630 PCNTO95613 3336 aa29.96■■■□□ 2.39
CDR2-202ENST00000561630 SNAP23O00161 211 aa29.95■■■□□ 2.39
CDR2-202ENST00000561630 JMYQ8N9B5 988 aa29.95■■■□□ 2.39
CDR2-202ENST00000561630 GMLQ99445 158 aa29.95■■■□□ 2.39
CDR2-202ENST00000561630 IRS2Q9Y4H2 1338 aa29.95■■■□□ 2.38
CDR2-202ENST00000561630 TBC1D10BQ4KMP7 808 aaPredicted RBP29.94■■■□□ 2.38
CDR2-202ENST00000561630 EGFRP00533 1210 aa29.93■■■□□ 2.38
CDR2-202ENST00000561630 ZNF280AP59817 542 aaPredicted RBP29.93■■■□□ 2.38
CDR2-202ENST00000561630 DACT2Q5SW24 774 aa29.92■■■□□ 2.38
CDR2-202ENST00000561630 STRIP1Q5VSL9 837 aa29.92■■■□□ 2.38
CDR2-202ENST00000561630 PUS3Q9BZE2 481 aaKnown RBP29.92■■■□□ 2.38
CDR2-202ENST00000561630 ZBED9Q6R2W3 1325 aa29.92■■■□□ 2.38
CDR2-202ENST00000561630 TRAF5O00463 557 aa29.91■■■□□ 2.38
CDR2-202ENST00000561630 FMR1Q06787 632 aaKnown RBP eCLIP29.91■■■□□ 2.385e-8■□□□□ 10.1
CDR2-202ENST00000561630 RIPOR2Q9Y4F9 1068 aa29.91■■■□□ 2.38
CDR2-202ENST00000561630 PLIN1O60240 522 aa29.9■■■□□ 2.38
CDR2-202ENST00000561630 BCAR3O75815 825 aa29.9■■■□□ 2.38
CDR2-202ENST00000561630 RBM26Q5T8P6 1007 aaKnown RBP29.9■■■□□ 2.38
CDR2-202ENST00000561630 CD209Q9NNX6 404 aa29.9■■■□□ 2.38
CDR2-202ENST00000561630 IPO8O15397 1037 aaKnown RBP29.89■■■□□ 2.38
CDR2-202ENST00000561630 USP17L8P0C7I0 530 aa29.89■■■□□ 2.38
CDR2-202ENST00000561630 UBTFL1P0CB47 393 aaPredicted RBP29.89■■■□□ 2.38
CDR2-202ENST00000561630 KIF4BQ2VIQ3 1234 aa29.89■■■□□ 2.38
CDR2-202ENST00000561630 CDC37L1Q7L3B6 337 aa29.89■■■□□ 2.38
CDR2-202ENST00000561630 GLIS2Q9BZE0 524 aaPredicted RBP29.89■■■□□ 2.38
CDR2-202ENST00000561630 INTS3Q68E01 1043 aaKnown RBP29.88■■■□□ 2.37
CDR2-202ENST00000561630 TTLL5Q6EMB2 1281 aa29.88■■■□□ 2.37
CDR2-202ENST00000561630 MKRN1Q9UHC7 482 aaKnown RBP29.88■■■□□ 2.37
CDR2-202ENST00000561630 MROH5Q6ZUA9 1318 aa29.88■■■□□ 2.37
CDR2-202ENST00000561630 UBE4AQ14139 1066 aa29.87■■■□□ 2.37
CDR2-202ENST00000561630 ZNF804AQ7Z570 1209 aa29.87■■■□□ 2.37
CDR2-202ENST00000561630 MXD3Q9BW11 206 aa29.87■■■□□ 2.37
CDR2-202ENST00000561630 MYO3BQ8WXR4 1341 aa29.87■■■□□ 2.37
CDR2-202ENST00000561630 CNTNAP1P78357 1384 aa29.87■■■□□ 2.37
CDR2-202ENST00000561630 TRIM27P14373 513 aa29.86■■■□□ 2.37
CDR2-202ENST00000561630 CST9Q5W186 159 aa29.86■■■□□ 2.37
CDR2-202ENST00000561630 FBXW7Q969H0 707 aa29.86■■■□□ 2.37
CDR2-202ENST00000561630 HDAC5Q9UQL6 1122 aa29.86■■■□□ 2.37
CDR2-202ENST00000561630 PSME4Q14997 1843 aa29.86■■■□□ 2.37
CDR2-202ENST00000561630 IL1R1P14778 569 aa29.85■■■□□ 2.37
CDR2-202ENST00000561630 LRRC24Q50LG9 513 aa29.85■■■□□ 2.37
CDR2-202ENST00000561630 ATF7IPQ6VMQ6 1270 aa29.85■■■□□ 2.37
CDR2-202ENST00000561630 FRAT1Q92837 279 aaPredicted RBP29.85■■■□□ 2.37
CDR2-202ENST00000561630 RFX5P48382 616 aaPredicted RBP29.84■■■□□ 2.37
CDR2-202ENST00000561630 GTF2IP78347 998 aa29.84■■■□□ 2.37
CDR2-202ENST00000561630 KLHDC4Q8TBB5 520 aa29.84■■■□□ 2.37
CDR2-202ENST00000561630 MYOZ2Q9NPC6 264 aa29.84■■■□□ 2.37
CDR2-202ENST00000561630 RASSF10A6NK89 507 aa29.83■■■□□ 2.37
CDR2-202ENST00000561630 USP48Q86UV5 1035 aa29.83■■■□□ 2.37
CDR2-202ENST00000561630 DCPSQ96C86 337 aaKnown RBP29.83■■■□□ 2.37
CDR2-202ENST00000561630 MEIS3Q99687 375 aa29.83■■■□□ 2.37
CDR2-202ENST00000561630 A0A1B0GUL6 1792 aa29.82■■■□□ 2.36
CDR2-202ENST00000561630 MMP14P50281 582 aa29.82■■■□□ 2.36
CDR2-202ENST00000561630 METTL24Q5JXM2 366 aa29.82■■■□□ 2.36
CDR2-202ENST00000561630 KRT26Q7Z3Y9 468 aa29.82■■■□□ 2.36
CDR2-202ENST00000561630 OGFOD1Q8N543 542 aa29.82■■■□□ 2.36
CDR2-202ENST00000561630 ABT1Q9ULW3 272 aaKnown RBP29.82■■■□□ 2.36
CDR2-202ENST00000561630 LRRFIP2Q9Y608 721 aaKnown RBP29.82■■■□□ 2.36
CDR2-202ENST00000561630 CELF2O95319 508 aaKnown RBP29.81■■■□□ 2.36
CDR2-202ENST00000561630 SCARF1Q14162 830 aa29.81■■■□□ 2.36
CDR2-202ENST00000561630 VGLL2Q8N8G2 317 aa29.81■■■□□ 2.36
CDR2-202ENST00000561630 PTPN12Q05209 780 aaKnown RBP29.8■■■□□ 2.36
CDR2-202ENST00000561630 DEFB115Q30KQ5 88 aa29.8■■■□□ 2.36
CDR2-202ENST00000561630 GGA3Q9NZ52 723 aa29.8■■■□□ 2.36
CDR2-202ENST00000561630 TNNQ9UQP3 1299 aa29.8■■■□□ 2.36
CDR2-202ENST00000561630 ASTN2O75129 1339 aaPredicted RBP29.79■■■□□ 2.36
CDR2-202ENST00000561630 PDE8BO95263 885 aa29.79■■■□□ 2.36
CDR2-202ENST00000561630 GNAI3P08754 354 aa29.79■■■□□ 2.36
CDR2-202ENST00000561630 VEGFBP49765 207 aa29.79■■■□□ 2.36
CDR2-202ENST00000561630 FAM84BQ96KN1 310 aaPredicted RBP29.79■■■□□ 2.36
CDR2-202ENST00000561630 EYA2O00167 538 aa29.78■■■□□ 2.36
CDR2-202ENST00000561630 HIBADHP31937 336 aaKnown RBP29.78■■■□□ 2.36
CDR2-202ENST00000561630 ZKSCAN2Q63HK3 967 aa29.78■■■□□ 2.36
CDR2-202ENST00000561630 TLL2Q9Y6L7 1015 aa29.78■■■□□ 2.36
CDR2-202ENST00000561630 ZNF646O15015 1829 aaPredicted RBP29.78■■■□□ 2.36
CDR2-202ENST00000561630 SASH1O94885 1247 aa29.77■■■□□ 2.36
CDR2-202ENST00000561630 GYG1P46976 350 aa29.77■■■□□ 2.36
CDR2-202ENST00000561630 ANGEL2Q5VTE6 544 aaKnown RBP29.77■■■□□ 2.36
CDR2-202ENST00000561630 DLK2Q6UY11 383 aa29.77■■■□□ 2.36
CDR2-202ENST00000561630 KIAA0825Q8IV33 1275 aa29.77■■■□□ 2.36
CDR2-202ENST00000561630 SULF1Q8IWU6 871 aa29.77■■■□□ 2.36
CDR2-202ENST00000561630 CLUAP1Q96AJ1 413 aa29.77■■■□□ 2.36
CDR2-202ENST00000561630 ADM5C9JUS6 153 aa29.76■■■□□ 2.35
CDR2-202ENST00000561630 FKBP1AP62942 108 aaKnown RBP29.76■■■□□ 2.35
CDR2-202ENST00000561630 CERS5Q8N5B7 392 aa29.76■■■□□ 2.35
CDR2-202ENST00000561630 TDRD7Q8NHU6 1098 aaKnown RBP29.76■■■□□ 2.35
CDR2-202ENST00000561630 FBXO3Q9UK99 471 aa29.76■■■□□ 2.35
CDR2-202ENST00000561630 ZNF408Q9H9D4 720 aa29.75■■■□□ 2.35
CDR2-202ENST00000561630 HDAC9Q9UKV0 1011 aa29.75■■■□□ 2.35
CDR2-202ENST00000561630 PITPNM2Q9BZ72 1349 aa29.74■■■□□ 2.35
CDR2-202ENST00000561630 NBPF9Q3BBW0 867 aa29.74■■■□□ 2.35
CDR2-202ENST00000561630 ATG9AQ7Z3C6 839 aa29.74■■■□□ 2.35
CDR2-202ENST00000561630 FBXO33Q7Z6M2 555 aa29.74■■■□□ 2.35
CDR2-202ENST00000561630 SAPCD2Q86UD0 394 aa29.74■■■□□ 2.35
CDR2-202ENST00000561630 FAM205AQ6ZU69 1335 aa29.73■■■□□ 2.35
CDR2-202ENST00000561630 WNT10BO00744 389 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms