RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 ZC3H15Q8WU90 426 aaKnown RBP19.47■□□□□ 0.71
CCDC113-203ENST00000561517 USP17L3A6NCW0 530 aa19.46■□□□□ 0.71
CCDC113-203ENST00000561517 USP17L4A6NCW7 530 aa19.46■□□□□ 0.71
CCDC113-203ENST00000561517 TAF5LO75529 589 aa19.46■□□□□ 0.71
CCDC113-203ENST00000561517 KLRK1P26718 216 aa19.46■□□□□ 0.71
CCDC113-203ENST00000561517 KCNJ4P48050 445 aa19.46■□□□□ 0.71
CCDC113-203ENST00000561517 RSBN1LQ6PCB5 846 aaPredicted RBP19.46■□□□□ 0.71
CCDC113-203ENST00000561517 USP17L1Q7RTZ2 530 aa19.46■□□□□ 0.71
CCDC113-203ENST00000561517 GMLQ99445 158 aa19.46■□□□□ 0.71
CCDC113-203ENST00000561517 CNNM1Q9NRU3 951 aa19.46■□□□□ 0.71
CCDC113-203ENST00000561517 SNAP23O00161 211 aa19.45■□□□□ 0.7
CCDC113-203ENST00000561517 TMEM88BA6NKF7 163 aa19.44■□□□□ 0.7
CCDC113-203ENST00000561517 IPO8O15397 1037 aaKnown RBP19.44■□□□□ 0.7
CCDC113-203ENST00000561517 BCAR3O75815 825 aa19.44■□□□□ 0.7
CCDC113-203ENST00000561517 INTS3Q68E01 1043 aaKnown RBP19.44■□□□□ 0.7
CCDC113-203ENST00000561517 SAMD7Q7Z3H4 446 aa19.44■□□□□ 0.7
CCDC113-203ENST00000561517 PUS3Q9BZE2 481 aaKnown RBP19.44■□□□□ 0.7
CCDC113-203ENST00000561517 RIPOR2Q9Y4F9 1068 aa19.44■□□□□ 0.7
CCDC113-203ENST00000561517 ZNF280AP59817 542 aaPredicted RBP19.43■□□□□ 0.7
CCDC113-203ENST00000561517 DACT2Q5SW24 774 aa19.43■□□□□ 0.7
CCDC113-203ENST00000561517 STRIP1Q5VSL9 837 aa19.43■□□□□ 0.7
CCDC113-203ENST00000561517 JMYQ8N9B5 988 aa19.43■□□□□ 0.7
CCDC113-203ENST00000561517 EGFRP00533 1210 aa19.42■□□□□ 0.7
CCDC113-203ENST00000561517 UBTFL1P0CB47 393 aaPredicted RBP19.42■□□□□ 0.7
CCDC113-203ENST00000561517 TBC1D10BQ4KMP7 808 aaPredicted RBP19.42■□□□□ 0.7
CCDC113-203ENST00000561517 CD209Q9NNX6 404 aa19.42■□□□□ 0.7
CCDC113-203ENST00000561517 PLIN1O60240 522 aa19.41■□□□□ 0.7
CCDC113-203ENST00000561517 TRIM27P14373 513 aa19.41■□□□□ 0.7
CCDC113-203ENST00000561517 UBE4AQ14139 1066 aa19.41■□□□□ 0.7
CCDC113-203ENST00000561517 ATF7IPQ6VMQ6 1270 aa19.41■□□□□ 0.7
CCDC113-203ENST00000561517 MROH5Q6ZUA9 1318 aa19.41■□□□□ 0.7
CCDC113-203ENST00000561517 TRAF5O00463 557 aa19.4■□□□□ 0.7
CCDC113-203ENST00000561517 USP17L8P0C7I0 530 aa19.4■□□□□ 0.7
CCDC113-203ENST00000561517 RFX5P48382 616 aaPredicted RBP19.4■□□□□ 0.7
CCDC113-203ENST00000561517 FMR1Q06787 632 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCDC113-203ENST00000561517 KIF4BQ2VIQ3 1234 aa19.4■□□□□ 0.7
CCDC113-203ENST00000561517 LRRC24Q50LG9 513 aa19.4■□□□□ 0.7
CCDC113-203ENST00000561517 TTLL5Q6EMB2 1281 aa19.4■□□□□ 0.7
CCDC113-203ENST00000561517 HDAC5Q9UQL6 1122 aa19.4■□□□□ 0.7
CCDC113-203ENST00000561517 MYO3BQ8WXR4 1341 aa19.4■□□□□ 0.7
CCDC113-203ENST00000561517 IL1R1P14778 569 aa19.39■□□□□ 0.69
CCDC113-203ENST00000561517 RBM26Q5T8P6 1007 aaKnown RBP19.39■□□□□ 0.69
CCDC113-203ENST00000561517 CDC37L1Q7L3B6 337 aa19.39■□□□□ 0.69
CCDC113-203ENST00000561517 ZNF804AQ7Z570 1209 aa19.39■□□□□ 0.69
CCDC113-203ENST00000561517 KLHDC4Q8TBB5 520 aa19.39■□□□□ 0.69
CCDC113-203ENST00000561517 FRAT1Q92837 279 aaPredicted RBP19.39■□□□□ 0.69
CCDC113-203ENST00000561517 MEIS3Q99687 375 aa19.39■□□□□ 0.69
CCDC113-203ENST00000561517 GLIS2Q9BZE0 524 aaPredicted RBP19.39■□□□□ 0.69
CCDC113-203ENST00000561517 GTF2IP78347 998 aa19.38■□□□□ 0.69
CCDC113-203ENST00000561517 CNTNAP1P78357 1384 aa19.38■□□□□ 0.69
CCDC113-203ENST00000561517 VGLL2Q8N8G2 317 aa19.38■□□□□ 0.69
CCDC113-203ENST00000561517 MXD3Q9BW11 206 aa19.38■□□□□ 0.69
CCDC113-203ENST00000561517 TNNQ9UQP3 1299 aa19.38■□□□□ 0.69
CCDC113-203ENST00000561517 LRRFIP2Q9Y608 721 aaKnown RBP19.38■□□□□ 0.69
CCDC113-203ENST00000561517 MMP14P50281 582 aa19.37■□□□□ 0.69
CCDC113-203ENST00000561517 PTPN12Q05209 780 aaKnown RBP19.37■□□□□ 0.69
CCDC113-203ENST00000561517 CST9Q5W186 159 aa19.37■□□□□ 0.69
CCDC113-203ENST00000561517 FBXW7Q969H0 707 aa19.37■□□□□ 0.69
CCDC113-203ENST00000561517 MYOZ2Q9NPC6 264 aa19.37■□□□□ 0.69
CCDC113-203ENST00000561517 MKRN1Q9UHC7 482 aaKnown RBP19.37■□□□□ 0.69
CCDC113-203ENST00000561517 EYA2O00167 538 aa19.36■□□□□ 0.69
CCDC113-203ENST00000561517 GNAI3P08754 354 aa19.36■□□□□ 0.69
CCDC113-203ENST00000561517 METTL24Q5JXM2 366 aa19.36■□□□□ 0.69
CCDC113-203ENST00000561517 ZKSCAN2Q63HK3 967 aa19.36■□□□□ 0.69
CCDC113-203ENST00000561517 RASSF10A6NK89 507 aa19.35■□□□□ 0.69
CCDC113-203ENST00000561517 PDE8BO95263 885 aa19.35■□□□□ 0.69
CCDC113-203ENST00000561517 USP48Q86UV5 1035 aa19.35■□□□□ 0.69
CCDC113-203ENST00000561517 DCPSQ96C86 337 aaKnown RBP19.35■□□□□ 0.69
CCDC113-203ENST00000561517 FAM84BQ96KN1 310 aaPredicted RBP19.35■□□□□ 0.69
CCDC113-203ENST00000561517 FBXO3Q9UK99 471 aa19.35■□□□□ 0.69
CCDC113-203ENST00000561517 ASTN2O75129 1339 aaPredicted RBP19.34■□□□□ 0.69
CCDC113-203ENST00000561517 FKBP1AP62942 108 aaKnown RBP19.34■□□□□ 0.69
CCDC113-203ENST00000561517 SCARF1Q14162 830 aa19.34■□□□□ 0.69
CCDC113-203ENST00000561517 KRT26Q7Z3Y9 468 aa19.34■□□□□ 0.69
CCDC113-203ENST00000561517 OGFOD1Q8N543 542 aa19.34■□□□□ 0.69
CCDC113-203ENST00000561517 TDRD7Q8NHU6 1098 aaKnown RBP19.34■□□□□ 0.69
CCDC113-203ENST00000561517 CLUAP1Q96AJ1 413 aa19.34■□□□□ 0.69
CCDC113-203ENST00000561517 GGA3Q9NZ52 723 aa19.34■□□□□ 0.69
CCDC113-203ENST00000561517 FAM205AQ6ZU69 1335 aa19.33■□□□□ 0.69
CCDC113-203ENST00000561517 SASH1O94885 1247 aa19.33■□□□□ 0.68
CCDC113-203ENST00000561517 CELF2O95319 508 aaKnown RBP19.33■□□□□ 0.68
CCDC113-203ENST00000561517 HIBADHP31937 336 aaKnown RBP19.33■□□□□ 0.68
CCDC113-203ENST00000561517 GYG1P46976 350 aa19.33■□□□□ 0.68
CCDC113-203ENST00000561517 DEFB115Q30KQ5 88 aa19.33■□□□□ 0.68
CCDC113-203ENST00000561517 ATG9AQ7Z3C6 839 aa19.33■□□□□ 0.68
CCDC113-203ENST00000561517 CERS5Q8N5B7 392 aa19.33■□□□□ 0.68
CCDC113-203ENST00000561517 ABT1Q9ULW3 272 aaKnown RBP19.33■□□□□ 0.68
CCDC113-203ENST00000561517 ECM29Q5VYK3 1845 aa19.32■□□□□ 0.68
CCDC113-203ENST00000561517 PITPNM2Q9BZ72 1349 aa19.32■□□□□ 0.68
CCDC113-203ENST00000561517 ARAP2Q8WZ64 1704 aa19.32■□□□□ 0.68
CCDC113-203ENST00000561517 CIAO1O76071 339 aa19.32■□□□□ 0.68
CCDC113-203ENST00000561517 FGFR2P21802 821 aa19.32■□□□□ 0.68
CCDC113-203ENST00000561517 MTX1Q13505 466 aa19.32■□□□□ 0.68
CCDC113-203ENST00000561517 FBXO33Q7Z6M2 555 aa19.32■□□□□ 0.68
CCDC113-203ENST00000561517 KIAA0825Q8IV33 1275 aa19.32■□□□□ 0.68
CCDC113-203ENST00000561517 TMEM57Q8N5G2 664 aa19.32■□□□□ 0.68
CCDC113-203ENST00000561517 TLL2Q9Y6L7 1015 aa19.32■□□□□ 0.68
CCDC113-203ENST00000561517 MYH13Q9UKX3 1938 aa19.31■□□□□ 0.68
CCDC113-203ENST00000561517 VEGFBP49765 207 aa19.31■□□□□ 0.68
CCDC113-203ENST00000561517 PUM3Q15397 648 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms