RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 KCNQ4P56696 695 aa6.51□□□□□ -1.37
LRRC28-222ENST00000561431 EAPPQ56P03 285 aaPredicted RBP6.51□□□□□ -1.37
LRRC28-222ENST00000561431 DNAJC14Q6Y2X3 702 aaPredicted RBP6.51□□□□□ -1.37
LRRC28-222ENST00000561431 ZNF438Q7Z4V0 828 aa6.51□□□□□ -1.37
LRRC28-222ENST00000561431 PNMA5Q96PV4 448 aa6.51□□□□□ -1.37
LRRC28-222ENST00000561431 FMNL2Q96PY5 1086 aa6.51□□□□□ -1.37
LRRC28-222ENST00000561431 NIF3L1Q9GZT8 377 aa6.51□□□□□ -1.37
LRRC28-222ENST00000561431 DMGDHQ9UI17 866 aaKnown RBP6.51□□□□□ -1.37
LRRC28-222ENST00000561431 SLC6A14Q9UN76 642 aa6.51□□□□□ -1.37
LRRC28-222ENST00000561431 KCNH4Q9UQ05 1017 aa6.51□□□□□ -1.37
LRRC28-222ENST00000561431 A6NHS1 94 aa6.5□□□□□ -1.37
LRRC28-222ENST00000561431 COBLO75128 1261 aa6.5□□□□□ -1.37
LRRC28-222ENST00000561431 XYLBO75191 536 aa6.5□□□□□ -1.37
LRRC28-222ENST00000561431 TXKP42681 527 aa6.5□□□□□ -1.37
LRRC28-222ENST00000561431 ZNF326Q5BKZ1 582 aaKnown RBP6.5□□□□□ -1.37
LRRC28-222ENST00000561431 DMRTC2Q8IXT2 367 aaPredicted RBP6.5□□□□□ -1.37
LRRC28-222ENST00000561431 GIPC2Q8TF65 315 aa6.5□□□□□ -1.37
LRRC28-222ENST00000561431 NUDT8Q8WV74 236 aa6.5□□□□□ -1.37
LRRC28-222ENST00000561431 YBX3P16989 372 aaKnown RBP eCLIP6.49□□□□□ -1.37
LRRC28-222ENST00000561431 ATP2B2Q01814 1243 aa6.49□□□□□ -1.37
LRRC28-222ENST00000561431 TTC39BQ5VTQ0 682 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-222ENST00000561431 KRT25Q7Z3Z0 450 aa6.49□□□□□ -1.37
LRRC28-222ENST00000561431 GJD3Q8N144 294 aa6.49□□□□□ -1.37
LRRC28-222ENST00000561431 WFDC12Q8WWY7 111 aa6.49□□□□□ -1.37
LRRC28-222ENST00000561431 BHMTQ93088 406 aa6.49□□□□□ -1.37
LRRC28-222ENST00000561431 UBE2OQ9C0C9 1292 aaKnown RBP6.49□□□□□ -1.37
LRRC28-222ENST00000561431 GGNBP2Q9H3C7 697 aa6.49□□□□□ -1.37
LRRC28-222ENST00000561431 PCMTD2Q9NV79 361 aa6.49□□□□□ -1.37
LRRC28-222ENST00000561431 AMOTL2Q9Y2J4 779 aa6.49□□□□□ -1.37
LRRC28-222ENST00000561431 LAMC3Q9Y6N6 1575 aa6.48□□□□□ -1.37
LRRC28-222ENST00000561431 NOS3P29474 1203 aa6.48□□□□□ -1.37
LRRC28-222ENST00000561431 IREB2P48200 963 aaKnown RBP6.48□□□□□ -1.37
LRRC28-222ENST00000561431 TBC1D8BQ0IIM8 1120 aa6.48□□□□□ -1.37
LRRC28-222ENST00000561431 NPAS4Q8IUM7 802 aa6.48□□□□□ -1.37
LRRC28-222ENST00000561431 NAGPAQ9UK23 515 aa6.48□□□□□ -1.37
LRRC28-222ENST00000561431 TOP2AP11388 1531 aaKnown RBP6.48□□□□□ -1.37
LRRC28-222ENST00000561431 GPR182O15218 404 aa6.47□□□□□ -1.37
LRRC28-222ENST00000561431 TREHO43280 583 aa6.47□□□□□ -1.37
LRRC28-222ENST00000561431 SASH3O75995 380 aa6.47□□□□□ -1.37
LRRC28-222ENST00000561431 CCINQ13939 588 aa6.47□□□□□ -1.37
LRRC28-222ENST00000561431 PSAPL1Q6NUJ1 521 aa6.47□□□□□ -1.37
LRRC28-222ENST00000561431 MEGF10Q96KG7 1140 aa6.47□□□□□ -1.37
LRRC28-222ENST00000561431 FAM129BQ96TA1 746 aa6.47□□□□□ -1.37
LRRC28-222ENST00000561431 ELP3Q9H9T3 547 aa6.47□□□□□ -1.37
LRRC28-222ENST00000561431 PHACTR2O75167 634 aa6.46□□□□□ -1.38
LRRC28-222ENST00000561431 P4HBP07237 508 aaKnown RBP6.46□□□□□ -1.38
LRRC28-222ENST00000561431 FGD1P98174 961 aa6.46□□□□□ -1.38
LRRC28-222ENST00000561431 PDE12Q6L8Q7 609 aaKnown RBP6.46□□□□□ -1.38
LRRC28-222ENST00000561431 PRR23CQ6ZRP0 262 aa6.46□□□□□ -1.38
LRRC28-222ENST00000561431 NLRP13Q86W25 1043 aa6.46□□□□□ -1.38
LRRC28-222ENST00000561431 THOC2Q8NI27 1593 aaKnown RBP6.46□□□□□ -1.38
LRRC28-222ENST00000561431 ZNF428Q96B54 188 aa6.46□□□□□ -1.38
LRRC28-222ENST00000561431 IGFLR1Q9H665 355 aa6.46□□□□□ -1.38
LRRC28-222ENST00000561431 KCNMB2Q9Y691 235 aa6.46□□□□□ -1.38
LRRC28-222ENST00000561431 ERCC6Q03468 1493 aa6.46□□□□□ -1.38
LRRC28-222ENST00000561431 PNMA6FA0A0J9YX94 578 aa6.45□□□□□ -1.38
LRRC28-222ENST00000561431 LDHBP07195 334 aaKnown RBP6.45□□□□□ -1.38
LRRC28-222ENST00000561431 RARAP10276 462 aa6.45□□□□□ -1.38
LRRC28-222ENST00000561431 SSTR4P31391 388 aa6.45□□□□□ -1.38
LRRC28-222ENST00000561431 XPCQ01831 940 aaPredicted RBP6.45□□□□□ -1.38
LRRC28-222ENST00000561431 ORC1Q13415 861 aa6.45□□□□□ -1.38
LRRC28-222ENST00000561431 COL19A1Q14993 1142 aa6.45□□□□□ -1.38
LRRC28-222ENST00000561431 TRIP4Q15650 581 aaPredicted RBP6.45□□□□□ -1.38
LRRC28-222ENST00000561431 FBXO11Q86XK2 927 aa6.45□□□□□ -1.38
LRRC28-222ENST00000561431 SNX29Q8TEQ0 813 aa6.45□□□□□ -1.38
LRRC28-222ENST00000561431 DNAJB12Q9NXW2 375 aaKnown RBP6.45□□□□□ -1.38
LRRC28-222ENST00000561431 ARID1BQ8NFD5 2236 aaPredicted RBP6.45□□□□□ -1.38
LRRC28-222ENST00000561431 RBM47A0AV96 593 aaKnown RBP6.44□□□□□ -1.38
LRRC28-222ENST00000561431 E9PSI1 815 aa6.44□□□□□ -1.38
LRRC28-222ENST00000561431 EIF1AYO14602 144 aaKnown RBP6.44□□□□□ -1.38
LRRC28-222ENST00000561431 CPNE3O75131 537 aaKnown RBP6.44□□□□□ -1.38
LRRC28-222ENST00000561431 TNFRSF21O75509 655 aa6.44□□□□□ -1.38
LRRC28-222ENST00000561431 RGS9O75916 674 aaPredicted RBP6.44□□□□□ -1.38
LRRC28-222ENST00000561431 NFKB1P19838 968 aa6.44□□□□□ -1.38
LRRC28-222ENST00000561431 TARSP26639 723 aaKnown RBP6.44□□□□□ -1.38
LRRC28-222ENST00000561431 CD97P48960 835 aa6.44□□□□□ -1.38
LRRC28-222ENST00000561431 MSL1Q68DK7 614 aa6.44□□□□□ -1.38
LRRC28-222ENST00000561431 DTWD1Q8N5C7 304 aa6.44□□□□□ -1.38
LRRC28-222ENST00000561431 ALKBH8Q96BT7 664 aaKnown RBP6.44□□□□□ -1.38
LRRC28-222ENST00000561431 CSRNP1Q96S65 589 aa6.44□□□□□ -1.38
LRRC28-222ENST00000561431 C11orf16Q9NQ32 467 aa6.44□□□□□ -1.38
LRRC28-222ENST00000561431 ABI2Q9NYB9 513 aaPredicted RBP6.44□□□□□ -1.38
LRRC28-222ENST00000561431 FOXD3Q9UJU5 478 aaPredicted RBP6.44□□□□□ -1.38
LRRC28-222ENST00000561431 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.44□□□□□ -1.38
LRRC28-222ENST00000561431 CUX2O14529 1486 aa6.44□□□□□ -1.38
LRRC28-222ENST00000561431 KIF21AQ7Z4S6 1674 aa6.44□□□□□ -1.38
LRRC28-222ENST00000561431 PSAPP07602 524 aa6.43□□□□□ -1.38
LRRC28-222ENST00000561431 ZNF16P17020 682 aaPredicted RBP6.43□□□□□ -1.38
LRRC28-222ENST00000561431 CES1P23141 567 aa6.43□□□□□ -1.38
LRRC28-222ENST00000561431 IRAK1P51617 712 aa6.43□□□□□ -1.38
LRRC28-222ENST00000561431 FMR1Q06787 632 aaKnown RBP eCLIP6.43□□□□□ -1.38
LRRC28-222ENST00000561431 DSC3Q14574 896 aa6.43□□□□□ -1.38
LRRC28-222ENST00000561431 ALG1LQ6GMV1 187 aa6.43□□□□□ -1.38
LRRC28-222ENST00000561431 PMEPA1Q969W9 287 aa6.43□□□□□ -1.38
LRRC28-222ENST00000561431 GSX2Q9BZM3 304 aa6.43□□□□□ -1.38
LRRC28-222ENST00000561431 MRS2Q9HD23 443 aa6.43□□□□□ -1.38
LRRC28-222ENST00000561431 TMEM63CQ9P1W3 806 aa6.43□□□□□ -1.38
LRRC28-222ENST00000561431 CADPSQ9ULU8 1353 aa6.43□□□□□ -1.38
LRRC28-222ENST00000561431 EGFRP00533 1210 aa6.42□□□□□ -1.38
LRRC28-222ENST00000561431 FSTP19883 344 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms