RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 TMEM88BA6NKF7 163 aa16.01■□□□□ 0.15
CHRNA3-208ENST00000561128 HNRNPUQ00839 825 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHRNA3-208ENST00000561128 RSBN1LQ6PCB5 846 aaPredicted RBP16.01■□□□□ 0.15
CHRNA3-208ENST00000561128 ADM5C9JUS6 153 aa16■□□□□ 0.15
CHRNA3-208ENST00000561128 KIF4BQ2VIQ3 1234 aa16■□□□□ 0.15
CHRNA3-208ENST00000561128 DACT2Q5SW24 774 aa16■□□□□ 0.15
CHRNA3-208ENST00000561128 RBM26Q5T8P6 1007 aaKnown RBP16■□□□□ 0.15
CHRNA3-208ENST00000561128 LEMD3Q9Y2U8 911 aa16■□□□□ 0.15
CHRNA3-208ENST00000561128 G3V3G9 751 aa15.99■□□□□ 0.15
CHRNA3-208ENST00000561128 RPS12P25398 132 aaKnown RBP15.99■□□□□ 0.15
CHRNA3-208ENST00000561128 ZNF280AP59817 542 aaPredicted RBP15.99■□□□□ 0.15
CHRNA3-208ENST00000561128 LRRC24Q50LG9 513 aa15.99■□□□□ 0.15
CHRNA3-208ENST00000561128 DCAF8Q5TAQ9 597 aa15.99■□□□□ 0.15
CHRNA3-208ENST00000561128 SCAF8Q9UPN6 1271 aaKnown RBP15.99■□□□□ 0.15
CHRNA3-208ENST00000561128 USP17L3A6NCW0 530 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 USP17L4A6NCW7 530 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 PLIN1O60240 522 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 BCAR3O75815 825 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 VEGFBP49765 207 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 BRPF1P55201 1214 aaPredicted RBP15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 CCDC57Q2TAC2 916 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 LDHAL6AQ6ZMR3 332 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 USP17L1Q7RTZ2 530 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 CERS5Q8N5B7 392 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 ARAP2Q8WZ64 1704 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 FBXW7Q969H0 707 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 ANKRD2Q9GZV1 360 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 GGA3Q9NZ52 723 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 JAG2Q9Y219 1238 aa15.98■□□□□ 0.15
CHRNA3-208ENST00000561128 POLR2AP24928 1970 aaKnown RBP15.97■□□□□ 0.15
CHRNA3-208ENST00000561128 H7C1D1 291 aa15.97■□□□□ 0.15
CHRNA3-208ENST00000561128 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
CHRNA3-208ENST00000561128 RFX5P48382 616 aaPredicted RBP15.97■□□□□ 0.15
CHRNA3-208ENST00000561128 PODNQ7Z5L7 613 aa15.97■□□□□ 0.15
CHRNA3-208ENST00000561128 USP48Q86UV5 1035 aa15.97■□□□□ 0.15
CHRNA3-208ENST00000561128 MEIS3Q99687 375 aa15.97■□□□□ 0.15
CHRNA3-208ENST00000561128 COA1Q9GZY4 146 aa15.97■□□□□ 0.15
CHRNA3-208ENST00000561128 CNNM1Q9NRU3 951 aa15.97■□□□□ 0.15
CHRNA3-208ENST00000561128 RIPOR2Q9Y4F9 1068 aa15.97■□□□□ 0.15
CHRNA3-208ENST00000561128 AOX1Q06278 1338 aa15.96■□□□□ 0.15
CHRNA3-208ENST00000561128 RASSF10A6NK89 507 aa15.96■□□□□ 0.15
CHRNA3-208ENST00000561128 HSPA1AP0DMV8 641 aaKnown RBP15.96■□□□□ 0.15
CHRNA3-208ENST00000561128 HSPA1BP0DMV9 641 aaKnown RBP15.96■□□□□ 0.15
CHRNA3-208ENST00000561128 KCNJ4P48050 445 aa15.96■□□□□ 0.15
CHRNA3-208ENST00000561128 TAF7LQ5H9L4 462 aa15.96■□□□□ 0.15
CHRNA3-208ENST00000561128 C15orf52Q6ZUT6 534 aaKnown RBP15.96■□□□□ 0.15
CHRNA3-208ENST00000561128 VGLL2Q8N8G2 317 aa15.96■□□□□ 0.15
CHRNA3-208ENST00000561128 CD209Q9NNX6 404 aa15.96■□□□□ 0.15
CHRNA3-208ENST00000561128 PCDHAC2Q9Y5I4 1007 aa15.96■□□□□ 0.15
CHRNA3-208ENST00000561128 CELF2O95319 508 aaKnown RBP15.95■□□□□ 0.14
CHRNA3-208ENST00000561128 GTF2IP78347 998 aa15.95■□□□□ 0.14
CHRNA3-208ENST00000561128 AGBL3Q8NEM8 1001 aa15.95■□□□□ 0.14
CHRNA3-208ENST00000561128 ZC3H15Q8WU90 426 aaKnown RBP15.95■□□□□ 0.14
CHRNA3-208ENST00000561128 ZNF408Q9H9D4 720 aa15.95■□□□□ 0.14
CHRNA3-208ENST00000561128 ABT1Q9ULW3 272 aaKnown RBP15.95■□□□□ 0.14
CHRNA3-208ENST00000561128 TRIM27P14373 513 aa15.94■□□□□ 0.14
CHRNA3-208ENST00000561128 GYG1P46976 350 aa15.94■□□□□ 0.14
CHRNA3-208ENST00000561128 MYOZ2Q9NPC6 264 aa15.94■□□□□ 0.14
CHRNA3-208ENST00000561128 COL1A1P02452 1464 aaPredicted RBP15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 SASH1O94885 1247 aa15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 USP17L8P0C7I0 530 aa15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 NBPF9Q3BBW0 867 aa15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 STRIP1Q5VSL9 837 aa15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 ANGEL2Q5VTE6 544 aaKnown RBP15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 CYP4F22Q6NT55 531 aa15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 KRT26Q7Z3Y9 468 aa15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 KIAA0825Q8IV33 1275 aa15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 API5Q9BZZ5 524 aaKnown RBP15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 LRRFIP2Q9Y608 721 aaKnown RBP15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 TLL2Q9Y6L7 1015 aa15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 KIF16BQ96L93 1317 aa15.93■□□□□ 0.14
CHRNA3-208ENST00000561128 IL1R1P14778 569 aa15.92■□□□□ 0.14
CHRNA3-208ENST00000561128 PTPN12Q05209 780 aaKnown RBP15.92■□□□□ 0.14
CHRNA3-208ENST00000561128 SCARF1Q14162 830 aa15.92■□□□□ 0.14
CHRNA3-208ENST00000561128 GRIK5Q16478 980 aa15.92■□□□□ 0.14
CHRNA3-208ENST00000561128 TTLL5Q6EMB2 1281 aa15.92■□□□□ 0.14
CHRNA3-208ENST00000561128 CDC37L1Q7L3B6 337 aa15.92■□□□□ 0.14
CHRNA3-208ENST00000561128 UBTFL1P0CB47 393 aaPredicted RBP15.91■□□□□ 0.14
CHRNA3-208ENST00000561128 ATG9AQ7Z3C6 839 aa15.91■□□□□ 0.14
CHRNA3-208ENST00000561128 SAPCD2Q86UD0 394 aa15.91■□□□□ 0.14
CHRNA3-208ENST00000561128 CLUAP1Q96AJ1 413 aa15.91■□□□□ 0.14
CHRNA3-208ENST00000561128 FAM84BQ96KN1 310 aaPredicted RBP15.91■□□□□ 0.14
CHRNA3-208ENST00000561128 IQSEC3Q9UPP2 1182 aaPredicted RBP15.91■□□□□ 0.14
CHRNA3-208ENST00000561128 PA2G4Q9UQ80 394 aaKnown RBP15.91■□□□□ 0.14
CHRNA3-208ENST00000561128 ZBED9Q6R2W3 1325 aa15.91■□□□□ 0.14
CHRNA3-208ENST00000561128 ECM29Q5VYK3 1845 aa15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 WNT10BO00744 389 aa15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 AOC2O75106 756 aa15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 GRM1Q13255 1194 aa15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 DEFB115Q30KQ5 88 aa15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 METTL24Q5JXM2 366 aa15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 COL13A1Q5TAT6 717 aaPredicted RBP15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 PRAMEF18Q5VWM3 479 aa15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 INTS3Q68E01 1043 aaKnown RBP15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 FRAT1Q92837 279 aaPredicted RBP15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 CDCA5Q96FF9 252 aa15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 ZBED3Q96IU2 234 aaPredicted RBP15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 CAPNS2Q96L46 248 aa15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.9■□□□□ 0.14
CHRNA3-208ENST00000561128 WDR33Q9C0J8 1336 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms