RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 E2F8A0AVK6 867 aa2.58□□□□□ -2
RTF1-207ENST00000561076 IQCA1LA6NCM1 817 aa2.58□□□□□ -2
RTF1-207ENST00000561076 AGRPO00253 132 aa2.58□□□□□ -2
RTF1-207ENST00000561076 TNFRSF21O75509 655 aa2.58□□□□□ -2
RTF1-207ENST00000561076 MICAL2O94851 1124 aa2.58□□□□□ -2
RTF1-207ENST00000561076 ADH1BP00325 375 aa2.58□□□□□ -2
RTF1-207ENST00000561076 POLR3DP05423 398 aaPredicted RBP2.58□□□□□ -2
RTF1-207ENST00000561076 U2AF1L5P0DN76 240 aaPredicted RBP2.58□□□□□ -2
RTF1-207ENST00000561076 IMPDH2P12268 514 aa2.58□□□□□ -2
RTF1-207ENST00000561076 CD53P19397 219 aa2.58□□□□□ -2
RTF1-207ENST00000561076 CES1P23141 567 aa2.58□□□□□ -2
RTF1-207ENST00000561076 FCGRTP55899 365 aa2.58□□□□□ -2
RTF1-207ENST00000561076 U2AF1Q01081 240 aaKnown RBP eCLIP2.58□□□□□ -2
RTF1-207ENST00000561076 ITKQ08881 620 aa2.58□□□□□ -2
RTF1-207ENST00000561076 FOXD4Q12950 439 aaPredicted RBP2.58□□□□□ -2
RTF1-207ENST00000561076 PICALMQ13492 652 aa2.58□□□□□ -2
RTF1-207ENST00000561076 SEPT6Q14141 434 aa2.58□□□□□ -2
RTF1-207ENST00000561076 INTS6LQ5JSJ4 861 aaKnown RBP2.58□□□□□ -2
RTF1-207ENST00000561076 GNASQ5JWF2 1037 aa2.58□□□□□ -2
RTF1-207ENST00000561076 PERM1Q5SV97 790 aa2.58□□□□□ -2
RTF1-207ENST00000561076 USPL1Q5W0Q7 1092 aa2.58□□□□□ -2
RTF1-207ENST00000561076 PDE12Q6L8Q7 609 aaKnown RBP2.58□□□□□ -2
RTF1-207ENST00000561076 BICDL1Q6ZP65 573 aa2.58□□□□□ -2
RTF1-207ENST00000561076 DDX46Q7L014 1031 aaKnown RBP2.58□□□□□ -2
RTF1-207ENST00000561076 SV2BQ7L1I2 683 aa2.58□□□□□ -2
RTF1-207ENST00000561076 HDGFL2Q7Z4V5 671 aaPredicted RBP2.58□□□□□ -2
RTF1-207ENST00000561076 ZBTB46Q86UZ6 589 aa2.58□□□□□ -2
RTF1-207ENST00000561076 DDX42Q86XP3 938 aaKnown RBP eCLIP2.58□□□□□ -2
RTF1-207ENST00000561076 PASD1Q8IV76 773 aa2.58□□□□□ -2
RTF1-207ENST00000561076 TRMT44Q8IYL2 757 aaKnown RBP2.58□□□□□ -2
RTF1-207ENST00000561076 STK11IPQ8N1F8 1099 aa2.58□□□□□ -2
RTF1-207ENST00000561076 L3MBTL2Q969R5 705 aa2.58□□□□□ -2
RTF1-207ENST00000561076 MTMR8Q96EF0 704 aa2.58□□□□□ -2
RTF1-207ENST00000561076 THAP11Q96EK4 314 aa2.58□□□□□ -2
RTF1-207ENST00000561076 IL17RAQ96F46 866 aa2.58□□□□□ -2
RTF1-207ENST00000561076 EAF1Q96JC9 268 aaPredicted RBP2.58□□□□□ -2
RTF1-207ENST00000561076 SLC26A8Q96RN1 970 aa2.58□□□□□ -2
RTF1-207ENST00000561076 CDC6Q99741 560 aa2.58□□□□□ -2
RTF1-207ENST00000561076 NIFKQ9BYG3 293 aaKnown RBP2.58□□□□□ -2
RTF1-207ENST00000561076 SLC6A16Q9GZN6 736 aa2.58□□□□□ -2
RTF1-207ENST00000561076 MAF1Q9H063 256 aa2.58□□□□□ -2
RTF1-207ENST00000561076 GGNBP2Q9H3C7 697 aa2.58□□□□□ -2
RTF1-207ENST00000561076 OSBPL3Q9H4L5 887 aa2.58□□□□□ -2
RTF1-207ENST00000561076 SUV39H2Q9H5I1 410 aa2.58□□□□□ -2
RTF1-207ENST00000561076 ARHGEF10LQ9HCE6 1279 aa2.58□□□□□ -2
RTF1-207ENST00000561076 PRDM9Q9NQV7 894 aa2.58□□□□□ -2
RTF1-207ENST00000561076 RAB6BQ9NRW1 208 aa2.58□□□□□ -2
RTF1-207ENST00000561076 PGPEP1Q9NXJ5 209 aa2.58□□□□□ -2
RTF1-207ENST00000561076 UBP1Q9NZI7 540 aa2.58□□□□□ -2
RTF1-207ENST00000561076 CNTN3Q9P232 1028 aa2.58□□□□□ -2
RTF1-207ENST00000561076 ANKIB1Q9P2G1 1089 aa2.58□□□□□ -2
RTF1-207ENST00000561076 TSR3Q9UJK0 312 aaKnown RBP2.58□□□□□ -2
RTF1-207ENST00000561076 FOXD3Q9UJU5 478 aaPredicted RBP2.58□□□□□ -2
RTF1-207ENST00000561076 PPM1HQ9ULR3 514 aa2.58□□□□□ -2
RTF1-207ENST00000561076 SAMM50Q9Y512 469 aa2.58□□□□□ -2
RTF1-207ENST00000561076 CD2APQ9Y5K6 639 aa2.58□□□□□ -2
RTF1-207ENST00000561076 PTCH2Q9Y6C5 1203 aa2.58□□□□□ -2
RTF1-207ENST00000561076 CCDC163A0A0D9SF12 145 aa2.57□□□□□ -2
RTF1-207ENST00000561076 PHF20L1A8MW92 1017 aa2.57□□□□□ -2
RTF1-207ENST00000561076 MEN1O00255 615 aa2.57□□□□□ -2
RTF1-207ENST00000561076 IFRD1O00458 451 aaPredicted RBP2.57□□□□□ -2
RTF1-207ENST00000561076 IRS4O14654 1257 aaPredicted RBP2.57□□□□□ -2
RTF1-207ENST00000561076 TLR3O15455 904 aaKnown RBP2.57□□□□□ -2
RTF1-207ENST00000561076 PDE8AO60658 829 aa2.57□□□□□ -2
RTF1-207ENST00000561076 STAU1O95793 577 aaKnown RBP2.57□□□□□ -2
RTF1-207ENST00000561076 PF4P02776 101 aa2.57□□□□□ -2
RTF1-207ENST00000561076 VIL1P09327 827 aaKnown RBP2.57□□□□□ -2
RTF1-207ENST00000561076 EDN3P14138 238 aa2.57□□□□□ -2
RTF1-207ENST00000561076 HOXB3P14651 431 aaPredicted RBP2.57□□□□□ -2
RTF1-207ENST00000561076 TATP17735 454 aaPredicted RBP2.57□□□□□ -2
RTF1-207ENST00000561076 FSHRP23945 695 aa2.57□□□□□ -2
RTF1-207ENST00000561076 CCND1P24385 295 aa2.57□□□□□ -2
RTF1-207ENST00000561076 VARSP26640 1264 aaKnown RBP2.57□□□□□ -2
RTF1-207ENST00000561076 CDC27P30260 824 aa2.57□□□□□ -2
RTF1-207ENST00000561076 MAN1A1P33908 653 aa2.57□□□□□ -2
RTF1-207ENST00000561076 PBX2P40425 430 aa2.57□□□□□ -2
RTF1-207ENST00000561076 TRAPPC10P48553 1259 aa2.57□□□□□ -2
RTF1-207ENST00000561076 CDKN1CP49918 316 aaPredicted RBP2.57□□□□□ -2
RTF1-207ENST00000561076 ARSDP51689 593 aa2.57□□□□□ -2
RTF1-207ENST00000561076 EPHA4P54764 986 aa2.57□□□□□ -2
RTF1-207ENST00000561076 WNT7BP56706 349 aa2.57□□□□□ -2
RTF1-207ENST00000561076 FOXK2Q01167 660 aa2.57□□□□□ -2
RTF1-207ENST00000561076 SQSTM1Q13501 440 aa2.57□□□□□ -2
RTF1-207ENST00000561076 MLECQ14165 292 aa2.57□□□□□ -2
RTF1-207ENST00000561076 TEAD4Q15561 434 aa2.57□□□□□ -2
RTF1-207ENST00000561076 GFOD2Q3B7J2 385 aa2.57□□□□□ -2
RTF1-207ENST00000561076 NBPF1Q3BBV0 1214 aa2.57□□□□□ -2
RTF1-207ENST00000561076 GRAMD1BQ3KR37 738 aa2.57□□□□□ -2
RTF1-207ENST00000561076 DALRD3Q5D0E6 543 aaKnown RBP2.57□□□□□ -2
RTF1-207ENST00000561076 TMEM67Q5HYA8 995 aa2.57□□□□□ -2
RTF1-207ENST00000561076 ZC3H12BQ5HYM0 836 aaKnown RBP2.57□□□□□ -2
RTF1-207ENST00000561076 C1orf53Q5VUE5 145 aa2.57□□□□□ -2
RTF1-207ENST00000561076 PTCRAQ6ISU1 281 aaPredicted RBP2.57□□□□□ -2
RTF1-207ENST00000561076 CNNM4Q6P4Q7 775 aa2.57□□□□□ -2
RTF1-207ENST00000561076 FBXL19Q6PCT2 694 aa2.57□□□□□ -2
RTF1-207ENST00000561076 TPTE2Q6XPS3 522 aa2.57□□□□□ -2
RTF1-207ENST00000561076 EEPD1Q7L9B9 569 aa2.57□□□□□ -2
RTF1-207ENST00000561076 ZNF354CQ86Y25 554 aa2.57□□□□□ -2
RTF1-207ENST00000561076 JAMLQ86YT9 394 aa2.57□□□□□ -2
RTF1-207ENST00000561076 AMOTL1Q8IY63 956 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms