RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 EYA2O00167 538 aa16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 TAF5LO75529 589 aa16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 CAPN2P17655 700 aa16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 TRIM28Q13263 835 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 BMS1Q14692 1282 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 MAP3K11Q16584 847 aa16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 SH2B1Q9NRF2 756 aaPredicted RBP16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 NDUFB9Q9Y6M9 179 aa16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 ZNF609O15014 1411 aa16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 FIBPO43427 364 aa16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 CIAO1O76071 339 aa16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 PSMA5P28066 241 aa16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 ZNF75DP51815 510 aa16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 NOL10Q9BSC4 688 aaKnown RBP16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 COL22A1Q8NFW1 1626 aaPredicted RBP16.35■□□□□ 0.21
RABGGTA-220ENST00000560998 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 LRP6O75581 1613 aa16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 COL16A1Q07092 1604 aaPredicted RBP16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 CAVIN2O95810 425 aa16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 TSGA10IPQ3SY00 556 aa16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 USPL1Q5W0Q7 1092 aa16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 KIF6Q6ZMV9 814 aa16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 TDRD7Q8NHU6 1098 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 ZNF594Q96JF6 807 aaPredicted RBP16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 EFCC1Q9HA90 598 aa16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 HMG20BQ9P0W2 317 aa16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 SMC3Q9UQE7 1217 aa16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 ROBO1Q9Y6N7 1651 aa16.34■□□□□ 0.21
RABGGTA-220ENST00000560998 STARD3NLO95772 234 aa16.33■□□□□ 0.21
RABGGTA-220ENST00000560998 SYT1P21579 422 aa16.33■□□□□ 0.21
RABGGTA-220ENST00000560998 RBM6P78332 1123 aaKnown RBP16.33■□□□□ 0.21
RABGGTA-220ENST00000560998 LRRC24Q50LG9 513 aa16.33■□□□□ 0.21
RABGGTA-220ENST00000560998 DRC7Q8IY82 874 aa16.33■□□□□ 0.21
RABGGTA-220ENST00000560998 KCND1Q9NSA2 647 aa16.33■□□□□ 0.21
RABGGTA-220ENST00000560998 ZNF330Q9Y3S2 320 aaPredicted RBP16.33■□□□□ 0.21
RABGGTA-220ENST00000560998 MRVI1Q9Y6F6 885 aa16.33■□□□□ 0.21
RABGGTA-220ENST00000560998 WNK3Q9BYP7 1800 aa16.33■□□□□ 0.2
RABGGTA-220ENST00000560998 IRX3P78415 501 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-220ENST00000560998 TYRO3Q06418 890 aa16.33■□□□□ 0.2
RABGGTA-220ENST00000560998 DDX46Q7L014 1031 aaKnown RBP16.33■□□□□ 0.2
RABGGTA-220ENST00000560998 CCDC83Q8IWF9 413 aa16.33■□□□□ 0.2
RABGGTA-220ENST00000560998 KBTBD3Q8NAB2 608 aa16.33■□□□□ 0.2
RABGGTA-220ENST00000560998 NEUROD6Q96NK8 337 aa16.33■□□□□ 0.2
RABGGTA-220ENST00000560998 NUP62CLQ9H1M0 184 aa16.33■□□□□ 0.2
RABGGTA-220ENST00000560998 TAF6LQ9Y6J9 622 aa16.33■□□□□ 0.2
RABGGTA-220ENST00000560998 ELP1O95163 1332 aa16.33■□□□□ 0.2
RABGGTA-220ENST00000560998 AHDC1Q5TGY3 1603 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-220ENST00000560998 BCL9O00512 1426 aa16.32■□□□□ 0.2
RABGGTA-220ENST00000560998 TIMM10P62072 90 aa16.32■□□□□ 0.2
RABGGTA-220ENST00000560998 ST3GAL1Q11201 340 aa16.32■□□□□ 0.2
RABGGTA-220ENST00000560998 FBXO38Q6PIJ6 1188 aa16.32■□□□□ 0.2
RABGGTA-220ENST00000560998 NYAP1Q6ZVC0 841 aa16.32■□□□□ 0.2
RABGGTA-220ENST00000560998 ALDH8A1Q9H2A2 487 aaPredicted RBP16.32■□□□□ 0.2
RABGGTA-220ENST00000560998 PALLDQ8WX93 1383 aa16.32■□□□□ 0.2
RABGGTA-220ENST00000560998 ERICH4A6NGS2 130 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 RPS6KB1P23443 525 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 LRMPQ12912 555 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 COL9A3Q14050 684 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 ME3Q16798 604 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 MCMDC2Q4G0Z9 681 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 BLOC1S2Q6QNY1 142 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 ZNF215Q9UL58 517 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 CCDC9Q9Y3X0 531 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 MAP3K15Q6ZN16 1313 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 SLU7O95391 586 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 CHGBP05060 677 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 NAA30Q147X3 362 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 PTPN14Q15678 1187 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 MUM1L1Q5H9M0 696 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 TICAM2Q86XR7 235 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 PLA2G12BQ9BX93 195 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 PUS3Q9BZE2 481 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 FEZ2Q9UHY8 353 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 SH3TC1Q8TE82 1336 aa16.31■□□□□ 0.2
RABGGTA-220ENST00000560998 TEX35Q5T0J7 233 aa16.3■□□□□ 0.2
RABGGTA-220ENST00000560998 CCDC129Q6ZRS4 1044 aa16.3■□□□□ 0.2
RABGGTA-220ENST00000560998 PLCD3Q8N3E9 789 aa16.3■□□□□ 0.2
RABGGTA-220ENST00000560998 SEC62Q99442 399 aaKnown RBP16.3■□□□□ 0.2
RABGGTA-220ENST00000560998 TRIM5Q9C035 493 aa16.3■□□□□ 0.2
RABGGTA-220ENST00000560998 YY1AP1Q9H869 796 aa16.3■□□□□ 0.2
RABGGTA-220ENST00000560998 PAG1Q9NWQ8 432 aa16.3■□□□□ 0.2
RABGGTA-220ENST00000560998 U3KPZ7 1027 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-220ENST00000560998 SPEF2Q9C093 1822 aa16.3■□□□□ 0.2
RABGGTA-220ENST00000560998 A0A1B0GUL7 405 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 GOLIM4O00461 696 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 GJB2P29033 226 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 ANKRD1Q15327 319 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 CCDC57Q2TAC2 916 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 GIGYF2Q6Y7W6 1299 aaKnown RBP16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 RBM43Q6ZSC3 357 aaKnown RBP16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 TXLNBQ8N3L3 684 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 ZBTB38Q8NAP3 1195 aaPredicted RBP16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 SLC4A9Q96Q91 983 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 TRIM34Q9BYJ4 488 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 CBX8Q9HC52 389 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 FBXO3Q9UK99 471 aa16.29■□□□□ 0.2
RABGGTA-220ENST00000560998 ANKRD36CQ5JPF3 1778 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms