RNA–Protein interactions for RNA: ENST00000560878.1

SPG21-212, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-212ENST00000560878 OSBPL3Q9H4L5 887 aa6.43□□□□□ -1.38
SPG21-212ENST00000560878 POLKQ9UBT6 870 aa6.43□□□□□ -1.38
SPG21-212ENST00000560878 ABCC6O95255 1503 aa6.43□□□□□ -1.38
SPG21-212ENST00000560878 GLI3P10071 1580 aa6.43□□□□□ -1.38
SPG21-212ENST00000560878 NRAPQ86VF7 1730 aa6.42□□□□□ -1.38
SPG21-212ENST00000560878 A0A1W2PRU2 124 aa6.42□□□□□ -1.38
SPG21-212ENST00000560878 U2SURPO15042 1029 aaKnown RBP6.42□□□□□ -1.38
SPG21-212ENST00000560878 DIAPH1O60610 1272 aaKnown RBP6.42□□□□□ -1.38
SPG21-212ENST00000560878 GNRH1P01148 92 aa6.42□□□□□ -1.38
SPG21-212ENST00000560878 NBPF6Q5VWK0 638 aa6.42□□□□□ -1.38
SPG21-212ENST00000560878 NBPF4Q96M43 638 aa6.42□□□□□ -1.38
SPG21-212ENST00000560878 PCDHB11Q9Y5F2 797 aa6.42□□□□□ -1.38
SPG21-212ENST00000560878 LMO7Q8WWI1 1683 aa6.42□□□□□ -1.38
SPG21-212ENST00000560878 RGPD5Q99666 1765 aa6.41□□□□□ -1.38
SPG21-212ENST00000560878 SPATA31C2B4DYI2 1134 aa6.41□□□□□ -1.38
SPG21-212ENST00000560878 SCTRP47872 440 aa6.41□□□□□ -1.38
SPG21-212ENST00000560878 PLEKHO1Q53GL0 409 aaPredicted RBP6.41□□□□□ -1.38
SPG21-212ENST00000560878 C1orf141Q5JVX7 400 aa6.41□□□□□ -1.38
SPG21-212ENST00000560878 CCDC85AQ96PX6 553 aaPredicted RBP6.41□□□□□ -1.38
SPG21-212ENST00000560878 GRIP2Q9C0E4 1043 aa6.41□□□□□ -1.38
SPG21-212ENST00000560878 HRH3Q9Y5N1 445 aa6.41□□□□□ -1.38
SPG21-212ENST00000560878 USP54Q70EL1 1684 aa6.41□□□□□ -1.38
SPG21-212ENST00000560878 KAT6BQ8WYB5 2073 aa6.41□□□□□ -1.38
SPG21-212ENST00000560878 MAP2P11137 1827 aaKnown RBP6.41□□□□□ -1.38
SPG21-212ENST00000560878 OVOS2A0A0G2JMS6 1433 aa6.41□□□□□ -1.38
SPG21-212ENST00000560878 HMGB2P26583 209 aaKnown RBP6.4□□□□□ -1.38
SPG21-212ENST00000560878 EIF4A2Q14240 407 aaKnown RBP6.4□□□□□ -1.38
SPG21-212ENST00000560878 GPR161Q8N6U8 529 aaKnown RBP6.4□□□□□ -1.38
SPG21-212ENST00000560878 ACSBG1Q96GR2 724 aa6.4□□□□□ -1.38
SPG21-212ENST00000560878 PNNQ9H307 717 aaKnown RBP6.4□□□□□ -1.38
SPG21-212ENST00000560878 GDPD2Q9HCC8 539 aa6.4□□□□□ -1.38
SPG21-212ENST00000560878 PCDH11XQ9BZA7 1347 aa6.4□□□□□ -1.39
SPG21-212ENST00000560878 PCDH11YQ9BZA8 1340 aa6.4□□□□□ -1.39
SPG21-212ENST00000560878 NPC1L1Q9UHC9 1359 aa6.4□□□□□ -1.39
SPG21-212ENST00000560878 FAM208AQ9UK61 1670 aaKnown RBP6.39□□□□□ -1.39
SPG21-212ENST00000560878 COL18A1P39060 1754 aa6.39□□□□□ -1.39
SPG21-212ENST00000560878 BRWD3Q6RI45 1802 aa6.39□□□□□ -1.39
SPG21-212ENST00000560878 HSP90AB1P08238 724 aaKnown RBP6.39□□□□□ -1.39
SPG21-212ENST00000560878 USP4Q13107 963 aa6.39□□□□□ -1.39
SPG21-212ENST00000560878 RALBP1Q15311 655 aa6.39□□□□□ -1.39
SPG21-212ENST00000560878 MAP7D1Q3KQU3 841 aa6.39□□□□□ -1.39
SPG21-212ENST00000560878 AMOTQ4VCS5 1084 aa6.39□□□□□ -1.39
SPG21-212ENST00000560878 SULT6B1Q6IMI4 303 aa6.39□□□□□ -1.39
SPG21-212ENST00000560878 MARCH10Q8NA82 808 aaPredicted RBP6.39□□□□□ -1.39
SPG21-212ENST00000560878 XAGE2Q96GT9 111 aa6.39□□□□□ -1.39
SPG21-212ENST00000560878 ESYT1Q9BSJ8 1104 aa6.39□□□□□ -1.39
SPG21-212ENST00000560878 ANKRD26Q9UPS8 1709 aa6.39□□□□□ -1.39
SPG21-212ENST00000560878 ANP32CO43423 234 aa6.38□□□□□ -1.39
SPG21-212ENST00000560878 MYCP01106 439 aaPredicted RBP6.38□□□□□ -1.39
SPG21-212ENST00000560878 HMOX1P09601 288 aa6.38□□□□□ -1.39
SPG21-212ENST00000560878 U2AF1L5P0DN76 240 aaPredicted RBP6.38□□□□□ -1.39
SPG21-212ENST00000560878 PPP2R1AP30153 589 aa6.38□□□□□ -1.39
SPG21-212ENST00000560878 U2AF1Q01081 240 aaKnown RBP eCLIP6.38□□□□□ -1.39
SPG21-212ENST00000560878 KRT76Q01546 638 aa6.38□□□□□ -1.39
SPG21-212ENST00000560878 ZNF530Q6P9A1 599 aaPredicted RBP6.38□□□□□ -1.39
SPG21-212ENST00000560878 MPRIPQ6WCQ1 1025 aa6.38□□□□□ -1.39
SPG21-212ENST00000560878 SV2AQ7L0J3 742 aa6.38□□□□□ -1.39
SPG21-212ENST00000560878 DEFB132Q7Z7B7 95 aa6.38□□□□□ -1.39
SPG21-212ENST00000560878 IFNL2Q8IZJ0 200 aa6.38□□□□□ -1.39
SPG21-212ENST00000560878 NLRP3Q96P20 1036 aa6.38□□□□□ -1.39
SPG21-212ENST00000560878 COG6Q9Y2V7 657 aa6.38□□□□□ -1.39
SPG21-212ENST00000560878 DYRK1BQ9Y463 629 aa6.38□□□□□ -1.39
SPG21-212ENST00000560878 THSD7AQ9UPZ6 1657 aa6.37□□□□□ -1.39
SPG21-212ENST00000560878 TNS2Q63HR2 1409 aa6.37□□□□□ -1.39
SPG21-212ENST00000560878 SLURP2P0DP57 97 aa6.37□□□□□ -1.39
SPG21-212ENST00000560878 VAC14Q08AM6 782 aa6.37□□□□□ -1.39
SPG21-212ENST00000560878 FLIIQ13045 1269 aa6.37□□□□□ -1.39
SPG21-212ENST00000560878 WDR43Q15061 677 aaKnown RBP eCLIP6.37□□□□□ -1.39
SPG21-212ENST00000560878 SLFNL1Q499Z3 407 aa6.37□□□□□ -1.39
SPG21-212ENST00000560878 TMOD3Q9NYL9 352 aa6.37□□□□□ -1.39
SPG21-212ENST00000560878 PARP4Q9UKK3 1724 aaKnown RBP6.36□□□□□ -1.39
SPG21-212ENST00000560878 MAPK8IP3Q9UPT6 1336 aa6.36□□□□□ -1.39
SPG21-212ENST00000560878 MEN1O00255 615 aa6.36□□□□□ -1.39
SPG21-212ENST00000560878 IL2RAP01589 272 aa6.36□□□□□ -1.39
SPG21-212ENST00000560878 IL13P35225 146 aa6.36□□□□□ -1.39
SPG21-212ENST00000560878 ABL2P42684 1182 aa6.36□□□□□ -1.39
SPG21-212ENST00000560878 CABP4P57796 275 aa6.36□□□□□ -1.39
SPG21-212ENST00000560878 EZH2Q15910 746 aaKnown RBP6.36□□□□□ -1.39
SPG21-212ENST00000560878 PRICKLE2Q7Z3G6 844 aa6.36□□□□□ -1.39
SPG21-212ENST00000560878 RNF135Q8IUD6 432 aa6.36□□□□□ -1.39
SPG21-212ENST00000560878 TRIM22Q8IYM9 498 aa6.36□□□□□ -1.39
SPG21-212ENST00000560878 VWA5B2Q8N398 1253 aa6.36□□□□□ -1.39
SPG21-212ENST00000560878 RTF1Q92541 710 aaKnown RBP6.36□□□□□ -1.39
SPG21-212ENST00000560878 SMARCC1Q92922 1105 aaPredicted RBP6.36□□□□□ -1.39
SPG21-212ENST00000560878 COL25A1Q9BXS0 654 aaPredicted RBP6.36□□□□□ -1.39
SPG21-212ENST00000560878 DOLKQ9UPQ8 538 aa6.36□□□□□ -1.39
SPG21-212ENST00000560878 EP400Q96L91 3159 aa6.36□□□□□ -1.39
SPG21-212ENST00000560878 DISP2A7MBM2 1401 aa6.35□□□□□ -1.39
SPG21-212ENST00000560878 PARD3Q8TEW0 1356 aa6.35□□□□□ -1.39
SPG21-212ENST00000560878 IGSF1Q8N6C5 1336 aa6.35□□□□□ -1.39
SPG21-212ENST00000560878 MYBBP1AQ9BQG0 1328 aaKnown RBP6.35□□□□□ -1.39
SPG21-212ENST00000560878 PLSCR1O15162 318 aa6.35□□□□□ -1.39
SPG21-212ENST00000560878 KCNQ2O43526 872 aa6.35□□□□□ -1.39
SPG21-212ENST00000560878 LZTS3O60299 673 aaPredicted RBP6.35□□□□□ -1.39
SPG21-212ENST00000560878 TSGA10IPQ3SY00 556 aa6.35□□□□□ -1.39
SPG21-212ENST00000560878 NBPF10Q6P3W6 841 aaKnown RBP6.35□□□□□ -1.39
SPG21-212ENST00000560878 NBPF15Q8N660 670 aa6.35□□□□□ -1.39
SPG21-212ENST00000560878 NFATC2IPQ8NCF5 419 aa6.35□□□□□ -1.39
SPG21-212ENST00000560878 GAS2L2Q8NHY3 880 aa6.35□□□□□ -1.39
SPG21-212ENST00000560878 CNKSR1Q969H4 720 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms