RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 WNT10BO00744 389 aa15.1■□□□□ 0.01
KNSTRN-211ENST00000560673 MTFR1Q15390 333 aa15.1■□□□□ 0.01
KNSTRN-211ENST00000560673 APOBEC3FQ8IUX4 373 aaKnown RBP15.1■□□□□ 0.01
KNSTRN-211ENST00000560673 OGFOD1Q8N543 542 aa15.1■□□□□ 0.01
KNSTRN-211ENST00000560673 CLMNQ96JQ2 1002 aa15.1■□□□□ 0.01
KNSTRN-211ENST00000560673 PTPN18Q99952 460 aa15.1■□□□□ 0.01
KNSTRN-211ENST00000560673 FZD1Q9UP38 647 aa15.1■□□□□ 0.01
KNSTRN-211ENST00000560673 SH3TC1Q8TE82 1336 aa15.1■□□□□ 0.01
KNSTRN-211ENST00000560673 USP17L3A6NCW0 530 aa15.09■□□□□ 0.01
KNSTRN-211ENST00000560673 USP17L4A6NCW7 530 aa15.09■□□□□ 0.01
KNSTRN-211ENST00000560673 GJA8P48165 433 aa15.09■□□□□ 0.01
KNSTRN-211ENST00000560673 TAF7Q15545 349 aaPredicted RBP15.09■□□□□ 0.01
KNSTRN-211ENST00000560673 MAP3K11Q16584 847 aa15.09■□□□□ 0.01
KNSTRN-211ENST00000560673 USP17L1Q7RTZ2 530 aa15.09■□□□□ 0.01
KNSTRN-211ENST00000560673 LAMA2P24043 3122 aaKnown RBP15.09■□□□□ 0.01
KNSTRN-211ENST00000560673 TESPA1A2RU30 521 aaPredicted RBP15.08■□□□□ 0
KNSTRN-211ENST00000560673 UNCXA6NJT0 531 aa15.08■□□□□ 0
KNSTRN-211ENST00000560673 PPP1R12BO60237 982 aaPredicted RBP15.08■□□□□ 0
KNSTRN-211ENST00000560673 UFL1O94874 794 aa15.08■□□□□ 0
KNSTRN-211ENST00000560673 KIF22Q14807 665 aa15.08■□□□□ 0
KNSTRN-211ENST00000560673 NLRP10Q86W26 655 aa15.08■□□□□ 0
KNSTRN-211ENST00000560673 ZFYVE28Q9HCC9 887 aa15.08■□□□□ 0
KNSTRN-211ENST00000560673 MIS18AQ9NYP9 233 aa15.08■□□□□ 0
KNSTRN-211ENST00000560673 LAMB1P07942 1786 aa15.07■□□□□ 0
KNSTRN-211ENST00000560673 GJB1P08034 283 aa15.07■□□□□ 0
KNSTRN-211ENST00000560673 PRKAR2BP31323 418 aa15.07■□□□□ 0
KNSTRN-211ENST00000560673 BMP8BP34820 402 aa15.07■□□□□ 0
KNSTRN-211ENST00000560673 PRMT2P55345 433 aa15.07■□□□□ 0
KNSTRN-211ENST00000560673 DCTN1Q14203 1278 aa15.07■□□□□ 0
KNSTRN-211ENST00000560673 TAF1CQ15572 869 aaPredicted RBP15.07■□□□□ 0
KNSTRN-211ENST00000560673 LRIT3Q3SXY7 679 aa15.07■□□□□ 0
KNSTRN-211ENST00000560673 HSP90AB3PQ58FF7 597 aa15.07■□□□□ 0
KNSTRN-211ENST00000560673 PODXL2Q9NZ53 605 aa15.07■□□□□ 0
KNSTRN-211ENST00000560673 ANKIB1Q9P2G1 1089 aa15.07■□□□□ 0
KNSTRN-211ENST00000560673 ZNF646O15015 1829 aaPredicted RBP15.07■□□□□ 0
KNSTRN-211ENST00000560673 SASH1O94885 1247 aa15.06■□□□□ 0
KNSTRN-211ENST00000560673 FARP2O94887 1054 aaPredicted RBP15.06■□□□□ 0
KNSTRN-211ENST00000560673 GNRH1P01148 92 aa15.06■□□□□ 0
KNSTRN-211ENST00000560673 AMER1Q5JTC6 1135 aaPredicted RBP15.06■□□□□ 0
KNSTRN-211ENST00000560673 GGA1Q9UJY5 639 aa15.06■□□□□ 0
KNSTRN-211ENST00000560673 GJA5P36382 358 aa15.05■□□□□ -0
KNSTRN-211ENST00000560673 PODNQ7Z5L7 613 aa15.05■□□□□ -0
KNSTRN-211ENST00000560673 GDF15Q99988 308 aa15.05■□□□□ -0
KNSTRN-211ENST00000560673 RPTORQ8N122 1335 aa15.05■□□□□ -0
KNSTRN-211ENST00000560673 PSME4Q14997 1843 aa15.04■□□□□ -0
KNSTRN-211ENST00000560673 PLA2G5P39877 138 aa15.04■□□□□ -0
KNSTRN-211ENST00000560673 RPS8P62241 208 aaKnown RBP15.04■□□□□ -0
KNSTRN-211ENST00000560673 SF3B3Q15393 1217 aaKnown RBP15.04■□□□□ -0
KNSTRN-211ENST00000560673 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
KNSTRN-211ENST00000560673 ARHGAP39Q9C0H5 1083 aa15.04■□□□□ -0
KNSTRN-211ENST00000560673 RNF208Q9H0X6 261 aa15.04■□□□□ -0
KNSTRN-211ENST00000560673 DEFB129Q9H1M3 183 aa15.04■□□□□ -0
KNSTRN-211ENST00000560673 COL1A1P02452 1464 aaPredicted RBP15.03■□□□□ -0
KNSTRN-211ENST00000560673 HTATSF1O43719 755 aaKnown RBP15.03■□□□□ -0
KNSTRN-211ENST00000560673 WDHD1O75717 1129 aaPredicted RBP15.03■□□□□ -0
KNSTRN-211ENST00000560673 CCL5P13501 91 aa15.03■□□□□ -0
KNSTRN-211ENST00000560673 IREB2P48200 963 aaKnown RBP15.03■□□□□ -0
KNSTRN-211ENST00000560673 MMP14P50281 582 aa15.03■□□□□ -0
KNSTRN-211ENST00000560673 BCAMP50895 628 aa15.03■□□□□ -0
KNSTRN-211ENST00000560673 LACTBP83111 547 aaPredicted RBP15.03■□□□□ -0
KNSTRN-211ENST00000560673 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
KNSTRN-211ENST00000560673 RSPH6AQ9H0K4 717 aa15.03■□□□□ -0
KNSTRN-211ENST00000560673 COL3A1P02461 1466 aaPredicted RBP15.02■□□□□ -0
KNSTRN-211ENST00000560673 MYO3BQ8WXR4 1341 aa15.02■□□□□ -0
KNSTRN-211ENST00000560673 EIF4A1P60842 406 aaKnown RBP15.02■□□□□ -0
KNSTRN-211ENST00000560673 PNISRQ8TF01 805 aaKnown RBP15.02■□□□□ -0
KNSTRN-211ENST00000560673 FAM122AQ96E09 287 aa15.02■□□□□ -0
KNSTRN-211ENST00000560673 GRK4P32298 578 aa15.01□□□□□ -0.01
KNSTRN-211ENST00000560673 SUPT20HL1Q3ZLR7 823 aa15.01□□□□□ -0.01
KNSTRN-211ENST00000560673 ANKRD13AQ8IZ07 590 aa15.01□□□□□ -0.01
KNSTRN-211ENST00000560673 TDHQ8IZJ6 230 aa15.01□□□□□ -0.01
KNSTRN-211ENST00000560673 U2AF1L4Q8WU68 220 aaKnown RBP15.01□□□□□ -0.01
KNSTRN-211ENST00000560673 MS4A4AQ96JQ5 239 aa15.01□□□□□ -0.01
KNSTRN-211ENST00000560673 MXD3Q9BW11 206 aa15.01□□□□□ -0.01
KNSTRN-211ENST00000560673 DACT2Q5SW24 774 aa15□□□□□ -0.01
KNSTRN-211ENST00000560673 LRP10Q7Z4F1 713 aa15□□□□□ -0.01
KNSTRN-211ENST00000560673 RAET1EQ8TD07 263 aa15□□□□□ -0.01
KNSTRN-211ENST00000560673 BRI3BPQ8WY22 251 aa15□□□□□ -0.01
KNSTRN-211ENST00000560673 SYMPKQ92797 1274 aaKnown RBP15□□□□□ -0.01
KNSTRN-211ENST00000560673 OPTNQ96CV9 577 aa15□□□□□ -0.01
KNSTRN-211ENST00000560673 BIN2Q9UBW5 565 aaPredicted RBP15□□□□□ -0.01
KNSTRN-211ENST00000560673 RAPGEFL1Q9UHV5 662 aa15□□□□□ -0.01
KNSTRN-211ENST00000560673 PPP2R3BQ9Y5P8 575 aa15□□□□□ -0.01
KNSTRN-211ENST00000560673 SSC5DA1L4H1 1573 aa14.99□□□□□ -0.01
KNSTRN-211ENST00000560673 CCL15-CCL14A0A0B4J2E2 113 aa14.99□□□□□ -0.01
KNSTRN-211ENST00000560673 TLR2O60603 784 aa14.99□□□□□ -0.01
KNSTRN-211ENST00000560673 UBXN2AP68543 259 aa14.99□□□□□ -0.01
KNSTRN-211ENST00000560673 CCL15Q16663 113 aa14.99□□□□□ -0.01
KNSTRN-211ENST00000560673 FBXW7Q969H0 707 aa14.99□□□□□ -0.01
KNSTRN-211ENST00000560673 ZNF428Q96B54 188 aa14.99□□□□□ -0.01
KNSTRN-211ENST00000560673 TRIM47Q96LD4 638 aa14.99□□□□□ -0.01
KNSTRN-211ENST00000560673 RIPOR2Q9Y4F9 1068 aa14.99□□□□□ -0.01
KNSTRN-211ENST00000560673 COL4A1P02462 1669 aa14.99□□□□□ -0.01
KNSTRN-211ENST00000560673 ZNF316A6NFI3 1004 aaPredicted RBP14.98□□□□□ -0.01
KNSTRN-211ENST00000560673 HOXD10P28358 340 aa14.98□□□□□ -0.01
KNSTRN-211ENST00000560673 GTF2A2P52657 109 aa14.98□□□□□ -0.01
KNSTRN-211ENST00000560673 FAM43AQ8N2R8 423 aa14.98□□□□□ -0.01
KNSTRN-211ENST00000560673 FAM89AQ96GI7 184 aa14.98□□□□□ -0.01
KNSTRN-211ENST00000560673 GUCD1Q96NT3 240 aa14.98□□□□□ -0.01
KNSTRN-211ENST00000560673 ELP3Q9H9T3 547 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms