RNA–Protein interactions for RNA: ENST00000560631.1

RNF31-222, Transcript of ring finger protein 31, human

TSL 2

Gene RNF31, Length 320 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-222	ENST00000560631	PSME4	Q14997	1843 aa		10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	GLTPD2	A6NH11	291 aa		10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	GNAI2	P04899	355 aa		10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	RFX5	P48382	616 aa	Predicted RBP	10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	LDHAL6A	Q6ZMR3	332 aa		10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	SLAIN1	Q8ND83	568 aa		10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	TBC1D16	Q8TBP0	767 aa		10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	EYA3	Q99504	573 aa		10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	ANKRD2	Q9GZV1	360 aa		10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	GGA1	Q9UJY5	639 aa		10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	LEMD3	Q9Y2U8	911 aa		10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	CHMP3	Q9Y3E7	222 aa		10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	RIPOR2	Q9Y4F9	1068 aa		10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	LRRFIP2	Q9Y608	721 aa	Known RBP	10.06	□□□□□ -0.8
RNF31-222	ENST00000560631	WDR90	Q96KV7	1748 aa		10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	PPIP5K2	O43314	1243 aa		10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	PYGB	P11216	843 aa		10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	PTPN12	Q05209	780 aa	Known RBP	10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	CHRND	Q07001	517 aa		10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	WASHC4	Q2M389	1173 aa		10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	TAF7L	Q5H9L4	462 aa		10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	DCAF8	Q5TAQ9	597 aa		10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	DPY19L2	Q6NUT2	758 aa		10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	C15orf52	Q6ZUT6	534 aa	Known RBP	10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	LARGE2	Q8N3Y3	721 aa		10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	JDP2	Q8WYK2	163 aa		10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	COL4A5	P29400	1685 aa		10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	SCN9A	Q15858	1988 aa		10.05	□□□□□ -0.8
RNF31-222	ENST00000560631	C6orf229	H3BNL8	230 aa		10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	PLIN1	O60240	522 aa		10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	UFL1	O94874	794 aa		10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	IRX5	P78411	483 aa	Predicted RBP	10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	MVP	Q14764	893 aa	Known RBP	10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	AOC3	Q16853	763 aa		10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	ITPRIP	Q8IWB1	547 aa		10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	PANK1	Q8TE04	598 aa		10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	ZNF594	Q96JF6	807 aa	Predicted RBP	10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	CHMP4B	Q9H444	224 aa	Known RBP	10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	COPRS	Q9NQ92	184 aa		10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	ANKIB1	Q9P2G1	1089 aa		10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	DDX19B	Q9UMR2	479 aa		10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	SCN4A	P35499	1836 aa		10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	KDM2B	Q8NHM5	1336 aa		10.04	□□□□□ -0.8
RNF31-222	ENST00000560631	MED23	Q9ULK4	1368 aa		10.03	□□□□□ -0.8
RNF31-222	ENST00000560631	CIAO1	O76071	339 aa		10.03	□□□□□ -0.8
RNF31-222	ENST00000560631	ATP8B2	P98198	1209 aa		10.03	□□□□□ -0.8
RNF31-222	ENST00000560631	UBE4A	Q14139	1066 aa		10.03	□□□□□ -0.8
RNF31-222	ENST00000560631	NIM1K	Q8IY84	436 aa		10.03	□□□□□ -0.8
RNF31-222	ENST00000560631	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.03	□□□□□ -0.8
RNF31-222	ENST00000560631	PUS3	Q9BZE2	481 aa	Known RBP	10.03	□□□□□ -0.8
RNF31-222	ENST00000560631	CNNM1	Q9NRU3	951 aa		10.03	□□□□□ -0.8
RNF31-222	ENST00000560631	ZNRF3	Q9ULT6	936 aa		10.03	□□□□□ -0.8
RNF31-222	ENST00000560631	MROH5	Q6ZUA9	1318 aa		10.03	□□□□□ -0.8
RNF31-222	ENST00000560631	IRS2	Q9Y4H2	1338 aa		10.03	□□□□□ -0.8
RNF31-222	ENST00000560631	EYA2	O00167	538 aa		10.02	□□□□□ -0.81
RNF31-222	ENST00000560631	ST18	O60284	1047 aa		10.02	□□□□□ -0.81
RNF31-222	ENST00000560631	PLCG2	P16885	1265 aa		10.02	□□□□□ -0.81
RNF31-222	ENST00000560631	EIF6	P56537	245 aa	Known RBP	10.02	□□□□□ -0.81
RNF31-222	ENST00000560631	LRRC24	Q50LG9	513 aa		10.02	□□□□□ -0.81
RNF31-222	ENST00000560631	VGLL2	Q8N8G2	317 aa		10.02	□□□□□ -0.81
RNF31-222	ENST00000560631	SSH3	Q8TE77	659 aa		10.02	□□□□□ -0.81
RNF31-222	ENST00000560631	ZBTB40	Q9NUA8	1239 aa		10.02	□□□□□ -0.81
RNF31-222	ENST00000560631	ZNF804B	A4D1E1	1349 aa		10.02	□□□□□ -0.81
RNF31-222	ENST00000560631	YDJC	A8MPS7	323 aa		10.01	□□□□□ -0.81
RNF31-222	ENST00000560631	POTEC	B2RU33	542 aa		10.01	□□□□□ -0.81
RNF31-222	ENST00000560631	RRP1	P56182	461 aa	Known RBP	10.01	□□□□□ -0.81
RNF31-222	ENST00000560631	ATG9A	Q7Z3C6	839 aa		10.01	□□□□□ -0.81
RNF31-222	ENST00000560631	PODN	Q7Z5L7	613 aa		10.01	□□□□□ -0.81
RNF31-222	ENST00000560631	GPC2	Q8N158	579 aa		10.01	□□□□□ -0.81
RNF31-222	ENST00000560631	COA1	Q9GZY4	146 aa		10.01	□□□□□ -0.81
RNF31-222	ENST00000560631	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.01	□□□□□ -0.81
RNF31-222	ENST00000560631	PCDHB8	Q9UN66	801 aa		10.01	□□□□□ -0.81
RNF31-222	ENST00000560631	COG6	Q9Y2V7	657 aa		10.01	□□□□□ -0.81
RNF31-222	ENST00000560631	ZNF541	Q9H0D2	1346 aa		10.01	□□□□□ -0.81
RNF31-222	ENST00000560631	ZNF646	O15015	1829 aa	Predicted RBP	10	□□□□□ -0.81
RNF31-222	ENST00000560631	ZNF609	O15014	1411 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	PNMA6E	A0A0J9YXQ4	647 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	WTIP	A6NIX2	430 aa	Predicted RBP	10	□□□□□ -0.81
RNF31-222	ENST00000560631	KIF3C	O14782	793 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	RIMBP2	O15034	1052 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	SRGAP3	O43295	1099 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	ECE2	O60344	883 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	DDN	O94850	711 aa	Predicted RBP	10	□□□□□ -0.81
RNF31-222	ENST00000560631	PDE8B	O95263	885 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	VIL1	P09327	827 aa	Known RBP	10	□□□□□ -0.81
RNF31-222	ENST00000560631	VEGFA	P15692	232 aa	Predicted RBP	10	□□□□□ -0.81
RNF31-222	ENST00000560631	FGFR2	P21802	821 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	IL15	P40933	162 aa	Predicted RBP	10	□□□□□ -0.81
RNF31-222	ENST00000560631	VASP	P50552	380 aa	Predicted RBP	10	□□□□□ -0.81
RNF31-222	ENST00000560631	CXCL9	Q07325	125 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	TNIP1	Q15025	636 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	C20orf194	Q5TEA3	1177 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	CIAPIN1	Q6FI81	312 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	TXNRD3	Q86VQ6	643 aa		10	□□□□□ -0.81
RNF31-222	ENST00000560631	RPAP2	Q8IXW5	612 aa	Predicted RBP	10	□□□□□ -0.81
RNF31-222	ENST00000560631	HELB	Q8NG08	1087 aa	Predicted RBP	10	□□□□□ -0.81
RNF31-222	ENST00000560631	KLHDC4	Q8TBB5	520 aa		10	□□□□□ -0.81

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