RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 USP17L1Q7RTZ2 530 aa20.51■□□□□ 0.87
SPG21-211ENST00000560564 SUCLG2Q96I99 432 aa20.51■□□□□ 0.87
SPG21-211ENST00000560564 ABT1Q9ULW3 272 aaKnown RBP20.51■□□□□ 0.87
SPG21-211ENST00000560564 TLL2Q9Y6L7 1015 aa20.51■□□□□ 0.87
SPG21-211ENST00000560564 SNAP23O00161 211 aa20.5■□□□□ 0.87
SPG21-211ENST00000560564 KIF4BQ2VIQ3 1234 aa20.5■□□□□ 0.87
SPG21-211ENST00000560564 ALDH1L2Q3SY69 923 aa20.5■□□□□ 0.87
SPG21-211ENST00000560564 DACT2Q5SW24 774 aa20.5■□□□□ 0.87
SPG21-211ENST00000560564 COA1Q9GZY4 146 aa20.5■□□□□ 0.87
SPG21-211ENST00000560564 CELF2O95319 508 aaKnown RBP20.49■□□□□ 0.87
SPG21-211ENST00000560564 COL13A1Q5TAT6 717 aaPredicted RBP20.49■□□□□ 0.87
SPG21-211ENST00000560564 IFFO2Q5TF58 517 aa20.49■□□□□ 0.87
SPG21-211ENST00000560564 DLK2Q6UY11 383 aa20.49■□□□□ 0.87
SPG21-211ENST00000560564 ZNF594Q96JF6 807 aaPredicted RBP20.49■□□□□ 0.87
SPG21-211ENST00000560564 CHMP3Q9Y3E7 222 aa20.49■□□□□ 0.87
SPG21-211ENST00000560564 ASTN2O75129 1339 aaPredicted RBP20.49■□□□□ 0.87
SPG21-211ENST00000560564 RABL6Q3YEC7 729 aaPredicted RBP20.48■□□□□ 0.87
SPG21-211ENST00000560564 RBM26Q5T8P6 1007 aaKnown RBP20.48■□□□□ 0.87
SPG21-211ENST00000560564 STRIP1Q5VSL9 837 aa20.48■□□□□ 0.87
SPG21-211ENST00000560564 C15orf52Q6ZUT6 534 aaKnown RBP20.48■□□□□ 0.87
SPG21-211ENST00000560564 SAPCD2Q86UD0 394 aa20.48■□□□□ 0.87
SPG21-211ENST00000560564 USP48Q86UV5 1035 aa20.48■□□□□ 0.87
SPG21-211ENST00000560564 WDR33Q9C0J8 1336 aaKnown RBP20.48■□□□□ 0.87
SPG21-211ENST00000560564 TAF5LO75529 589 aa20.47■□□□□ 0.87
SPG21-211ENST00000560564 USP17L8P0C7I0 530 aa20.47■□□□□ 0.87
SPG21-211ENST00000560564 CCDC57Q2TAC2 916 aa20.47■□□□□ 0.87
SPG21-211ENST00000560564 HELBQ8NG08 1087 aaPredicted RBP20.47■□□□□ 0.87
SPG21-211ENST00000560564 MXD3Q9BW11 206 aa20.47■□□□□ 0.87
SPG21-211ENST00000560564 CT47B1P0C2W7 299 aaPredicted RBP20.46■□□□□ 0.87
SPG21-211ENST00000560564 KRT26Q7Z3Y9 468 aa20.46■□□□□ 0.87
SPG21-211ENST00000560564 CAPNS2Q96L46 248 aa20.46■□□□□ 0.87
SPG21-211ENST00000560564 WBP1LQ9NX94 342 aa20.46■□□□□ 0.87
SPG21-211ENST00000560564 GGA3Q9NZ52 723 aa20.46■□□□□ 0.87
SPG21-211ENST00000560564 ADM5C9JUS6 153 aa20.45■□□□□ 0.86
SPG21-211ENST00000560564 CYP4F22Q6NT55 531 aa20.45■□□□□ 0.86
SPG21-211ENST00000560564 ANKRD44Q8N8A2 993 aa20.45■□□□□ 0.86
SPG21-211ENST00000560564 HHIPL1Q96JK4 782 aa20.45■□□□□ 0.86
SPG21-211ENST00000560564 USP44Q9H0E7 712 aa20.45■□□□□ 0.86
SPG21-211ENST00000560564 BICC1Q9H694 974 aaKnown RBP20.45■□□□□ 0.86
SPG21-211ENST00000560564 MYOZ2Q9NPC6 264 aa20.45■□□□□ 0.86
SPG21-211ENST00000560564 FOXN1O15353 648 aa20.44■□□□□ 0.86
SPG21-211ENST00000560564 KCNJ4P48050 445 aa20.44■□□□□ 0.86
SPG21-211ENST00000560564 SCARF1Q14162 830 aa20.44■□□□□ 0.86
SPG21-211ENST00000560564 LDHAL6AQ6ZMR3 332 aa20.44■□□□□ 0.86
SPG21-211ENST00000560564 DCPSQ96C86 337 aaKnown RBP20.44■□□□□ 0.86
SPG21-211ENST00000560564 CD209Q9NNX6 404 aa20.44■□□□□ 0.86
SPG21-211ENST00000560564 SMC4Q9NTJ3 1288 aa20.44■□□□□ 0.86
SPG21-211ENST00000560564 MYO3BQ8WXR4 1341 aa20.44■□□□□ 0.86
SPG21-211ENST00000560564 BRPF1P55201 1214 aaPredicted RBP20.43■□□□□ 0.86
SPG21-211ENST00000560564 PUS3Q9BZE2 481 aaKnown RBP20.43■□□□□ 0.86
SPG21-211ENST00000560564 ZNF408Q9H9D4 720 aa20.43■□□□□ 0.86
SPG21-211ENST00000560564 ECE1P42892 770 aa20.42■□□□□ 0.86
SPG21-211ENST00000560564 TAF7LQ5H9L4 462 aa20.42■□□□□ 0.86
SPG21-211ENST00000560564 TTLL5Q6EMB2 1281 aa20.42■□□□□ 0.86
SPG21-211ENST00000560564 CNNM1Q9NRU3 951 aa20.42■□□□□ 0.86
SPG21-211ENST00000560564 IL1R1P14778 569 aa20.41■□□□□ 0.86
SPG21-211ENST00000560564 GTF2IP78347 998 aa20.41■□□□□ 0.86
SPG21-211ENST00000560564 ANGEL2Q5VTE6 544 aaKnown RBP20.41■□□□□ 0.86
SPG21-211ENST00000560564 RIPOR2Q9Y4F9 1068 aa20.41■□□□□ 0.86
SPG21-211ENST00000560564 PITPNM2Q9BZ72 1349 aa20.41■□□□□ 0.86
SPG21-211ENST00000560564 NBPF9Q3BBW0 867 aa20.4■□□□□ 0.86
SPG21-211ENST00000560564 SULF1Q8IWU6 871 aa20.4■□□□□ 0.86
SPG21-211ENST00000560564 CERS5Q8N5B7 392 aa20.4■□□□□ 0.86
SPG21-211ENST00000560564 FBXW7Q969H0 707 aa20.4■□□□□ 0.86
SPG21-211ENST00000560564 ECM29Q5VYK3 1845 aa20.39■□□□□ 0.86
SPG21-211ENST00000560564 WNT10BO00744 389 aa20.39■□□□□ 0.85
SPG21-211ENST00000560564 PAXIP1Q6ZW49 1069 aaPredicted RBP20.39■□□□□ 0.85
SPG21-211ENST00000560564 CDCA5Q96FF9 252 aa20.39■□□□□ 0.85
SPG21-211ENST00000560564 ZBED3Q96IU2 234 aaPredicted RBP20.39■□□□□ 0.85
SPG21-211ENST00000560564 ARAP2Q8WZ64 1704 aa20.39■□□□□ 0.85
SPG21-211ENST00000560564 AOC2O75106 756 aa20.38■□□□□ 0.85
SPG21-211ENST00000560564 MMP14P50281 582 aa20.38■□□□□ 0.85
SPG21-211ENST00000560564 RARSP54136 660 aaKnown RBP20.38■□□□□ 0.85
SPG21-211ENST00000560564 HUNKP57058 714 aa20.38■□□□□ 0.85
SPG21-211ENST00000560564 MAP2K1Q02750 393 aaPredicted RBP20.38■□□□□ 0.85
SPG21-211ENST00000560564 UBE4AQ14139 1066 aa20.38■□□□□ 0.85
SPG21-211ENST00000560564 ZNF804AQ7Z570 1209 aa20.38■□□□□ 0.85
SPG21-211ENST00000560564 KIAA0825Q8IV33 1275 aa20.38■□□□□ 0.85
SPG21-211ENST00000560564 MIER1Q8N108 512 aa20.38■□□□□ 0.85
SPG21-211ENST00000560564 OGFOD1Q8N543 542 aa20.38■□□□□ 0.85
SPG21-211ENST00000560564 GBA2Q9HCG7 927 aaPredicted RBP20.38■□□□□ 0.85
SPG21-211ENST00000560564 NOB1Q9ULX3 412 aaKnown RBP20.38■□□□□ 0.85
SPG21-211ENST00000560564 PAPPA2Q9BXP8 1791 aa20.37■□□□□ 0.85
SPG21-211ENST00000560564 PLIN1O60240 522 aa20.37■□□□□ 0.85
SPG21-211ENST00000560564 MAP2K2P36507 400 aa20.37■□□□□ 0.85
SPG21-211ENST00000560564 CTCFP49711 727 aaPredicted RBP20.37■□□□□ 0.85
SPG21-211ENST00000560564 LRRC24Q50LG9 513 aa20.37■□□□□ 0.85
SPG21-211ENST00000560564 VGLL2Q8N8G2 317 aa20.37■□□□□ 0.85
SPG21-211ENST00000560564 MROH5Q6ZUA9 1318 aa20.36■□□□□ 0.85
SPG21-211ENST00000560564 RFX5P48382 616 aaPredicted RBP20.36■□□□□ 0.85
SPG21-211ENST00000560564 GRM1Q13255 1194 aa20.36■□□□□ 0.85
SPG21-211ENST00000560564 AIDAQ96BJ3 306 aa20.36■□□□□ 0.85
SPG21-211ENST00000560564 PRDM10Q9NQV6 1147 aa20.36■□□□□ 0.85
SPG21-211ENST00000560564 SASH1O94885 1247 aa20.35■□□□□ 0.85
SPG21-211ENST00000560564 HSPA8P11142 646 aaKnown RBP20.35■□□□□ 0.85
SPG21-211ENST00000560564 FKBP1AP62942 108 aaKnown RBP20.35■□□□□ 0.85
SPG21-211ENST00000560564 KLHDC4Q8TBB5 520 aa20.35■□□□□ 0.85
SPG21-211ENST00000560564 FAM84BQ96KN1 310 aaPredicted RBP20.35■□□□□ 0.85
SPG21-211ENST00000560564 SCAF8Q9UPN6 1271 aaKnown RBP20.35■□□□□ 0.85
SPG21-211ENST00000560564 FAM205AQ6ZU69 1335 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms